RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
CLK2-202ENST00000361168 IGHV3OR16-9A0A0B4J2B5 98 aa11.75□□□□□ -0.53
CLK2-202ENST00000361168 LINC01549A6NIU2 74 aa11.75□□□□□ -0.53
CLK2-202ENST00000361168 LEPROTL1O95214 131 aa11.75□□□□□ -0.53
CLK2-202ENST00000361168 PMVKQ15126 192 aa11.74□□□□□ -0.53
CLK2-202ENST00000361168 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
CLK2-202ENST00000361168 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
CLK2-202ENST00000361168 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.74□□□□□ -0.53
CLK2-202ENST00000361168 ATP5LO75964 103 aa11.74□□□□□ -0.53
CLK2-202ENST00000361168 PAPPA-AS1Q5QFB9 102 aa11.74□□□□□ -0.53
CLK2-202ENST00000361168 Q8N814 137 aa11.74□□□□□ -0.53
CLK2-202ENST00000361168 H0Y8G0 127 aa11.73□□□□□ -0.53
CLK2-202ENST00000361168 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
CLK2-202ENST00000361168 LRP1BQ9NZR2 4599 aa11.72□□□□□ -0.53
CLK2-202ENST00000361168 PRSS1P07477 247 aa11.72□□□□□ -0.53
CLK2-202ENST00000361168 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
CLK2-202ENST00000361168 DYNC1H1Q14204 4646 aaKnown RBP11.72□□□□□ -0.53
CLK2-202ENST00000361168 SPATA12Q7Z6I5 190 aa11.72□□□□□ -0.53
CLK2-202ENST00000361168 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
CLK2-202ENST00000361168 COX7A2LO14548 114 aa11.7□□□□□ -0.54
CLK2-202ENST00000361168 CDKN2A-AS1Q9UH64 79 aa11.7□□□□□ -0.54
CLK2-202ENST00000361168 SLPIP03973 132 aa11.7□□□□□ -0.54
CLK2-202ENST00000361168 LINC01620Q4KN68 170 aa11.7□□□□□ -0.54
CLK2-202ENST00000361168 FAM19A3Q7Z5A8 133 aa11.7□□□□□ -0.54
CLK2-202ENST00000361168 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
CLK2-202ENST00000361168 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
CLK2-202ENST00000361168 MALP21145 153 aa11.68□□□□□ -0.54
CLK2-202ENST00000361168 PMCHL2Q9BQD1 86 aa11.68□□□□□ -0.54
CLK2-202ENST00000361168 MRPL35Q9NZE8 188 aaKnown RBP11.68□□□□□ -0.54
CLK2-202ENST00000361168 A0A087WZ39 114 aa11.67□□□□□ -0.54
CLK2-202ENST00000361168 SNRPEP62304 92 aaKnown RBP11.67□□□□□ -0.54
CLK2-202ENST00000361168 GEMIN7Q9H840 131 aaKnown RBP11.67□□□□□ -0.54
CLK2-202ENST00000361168 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
CLK2-202ENST00000361168 TINCRA0A1B0GVN0 87 aa11.66□□□□□ -0.54
CLK2-202ENST00000361168 HIST3H2BBQ8N257 126 aa11.66□□□□□ -0.54
CLK2-202ENST00000361168 LINC00469Q8N7U9 141 aa11.66□□□□□ -0.54
CLK2-202ENST00000361168 CHAC1Q9BUX1 264 aa11.66□□□□□ -0.54
CLK2-202ENST00000361168 CHTOPQ9Y3Y2 248 aaKnown RBP11.66□□□□□ -0.54
CLK2-202ENST00000361168 C11orf86A6NJI1 115 aa11.66□□□□□ -0.54
CLK2-202ENST00000361168 HERVK_113P63121 156 aa11.66□□□□□ -0.54
CLK2-202ENST00000361168 ODF1Q14990 250 aa11.66□□□□□ -0.54
CLK2-202ENST00000361168 EREGO14944 169 aa11.65□□□□□ -0.54
CLK2-202ENST00000361168 IGLC3P0DOY3 106 aa11.65□□□□□ -0.54
CLK2-202ENST00000361168 GVQW2A0A096LPI5 108 aaPredicted RBP11.64□□□□□ -0.55
CLK2-202ENST00000361168 TRAV12-1A0A0B4J245 112 aa11.64□□□□□ -0.55
CLK2-202ENST00000361168 S100A6P06703 90 aa11.64□□□□□ -0.55
CLK2-202ENST00000361168 TMA7Q9Y2S6 64 aaKnown RBP11.64□□□□□ -0.55
CLK2-202ENST00000361168 IGLV5-45A0A087WSX0 123 aa11.64□□□□□ -0.55
CLK2-202ENST00000361168 IGHV1-58A0A0C4DH39 117 aa11.63□□□□□ -0.55
CLK2-202ENST00000361168 ZNF22P17026 224 aaPredicted RBP11.63□□□□□ -0.55
CLK2-202ENST00000361168 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 IGLV5-52A0A0A0MRZ9 124 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 SPINK8P0C7L1 97 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 SEC11AP67812 179 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 HIST1H2BLQ99880 126 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 MAP1LC3CQ9BXW4 147 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 C5orf52A6NGY3 159 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 F8VRH5 84 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 C3orf79P0CE67 100 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 CFAP161Q6P656 301 aa11.62□□□□□ -0.55
CLK2-202ENST00000361168 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
CLK2-202ENST00000361168 KRTDAPP60985 99 aa11.6□□□□□ -0.55
CLK2-202ENST00000361168 SPAG11BQ08648 103 aa11.6□□□□□ -0.55
CLK2-202ENST00000361168 KIAA0087Q14695 138 aa11.6□□□□□ -0.55
CLK2-202ENST00000361168 C14orf177Q52M58 125 aa11.6□□□□□ -0.55
CLK2-202ENST00000361168 TMEM170BQ5T4T1 132 aa11.6□□□□□ -0.55
CLK2-202ENST00000361168 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
CLK2-202ENST00000361168 ZNF561-AS1K7EIQ3 104 aa11.59□□□□□ -0.55
CLK2-202ENST00000361168 TOMM7Q9P0U1 55 aa11.59□□□□□ -0.55
CLK2-202ENST00000361168 C16orf90A8MZG2 172 aa11.58□□□□□ -0.55
CLK2-202ENST00000361168 C2orf82Q6UX34 121 aa11.58□□□□□ -0.55
CLK2-202ENST00000361168 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.55
CLK2-202ENST00000361168 APOMO95445 188 aa11.58□□□□□ -0.56
CLK2-202ENST00000361168 KRTAP10-1P60331 282 aa11.58□□□□□ -0.56
CLK2-202ENST00000361168 C10orf25Q5T742 122 aa11.58□□□□□ -0.56
CLK2-202ENST00000361168 APOBP04114 4563 aaKnown RBP11.57□□□□□ -0.56
CLK2-202ENST00000361168 S100A2P29034 98 aa11.57□□□□□ -0.56
CLK2-202ENST00000361168 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
CLK2-202ENST00000361168 OR10D4PQ8NGN7 298 aa11.57□□□□□ -0.56
CLK2-202ENST00000361168 KIAA1109Q2LD37 5005 aa11.57□□□□□ -0.56
CLK2-202ENST00000361168 Q6ZRU5 148 aa11.56□□□□□ -0.56
CLK2-202ENST00000361168 DNAH8Q96JB1 4490 aa11.56□□□□□ -0.56
CLK2-202ENST00000361168 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
CLK2-202ENST00000361168 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
CLK2-202ENST00000361168 GCSHP23434 173 aa11.54□□□□□ -0.56
CLK2-202ENST00000361168 LINC01545Q5VT33 79 aa11.54□□□□□ -0.56
CLK2-202ENST00000361168 CAMK2N2Q96S95 79 aa11.54□□□□□ -0.56
CLK2-202ENST00000361168 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
CLK2-202ENST00000361168 C9orf163Q8N9P6 203 aa11.54□□□□□ -0.56
CLK2-202ENST00000361168 IGLV5-39A0A0G2JS06 123 aa11.53□□□□□ -0.56
CLK2-202ENST00000361168 TMEM223A0PJW6 202 aa11.53□□□□□ -0.56
CLK2-202ENST00000361168 DPM2O94777 84 aa11.53□□□□□ -0.56
CLK2-202ENST00000361168 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
CLK2-202ENST00000361168 H3BRM9 83 aa11.52□□□□□ -0.56
CLK2-202ENST00000361168 IGKCP01834 107 aa11.52□□□□□ -0.56
CLK2-202ENST00000361168 PET117Q6UWS5 81 aa11.52□□□□□ -0.56
CLK2-202ENST00000361168 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.56
CLK2-202ENST00000361168 BIRC6Q9NR09 4857 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms