RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TNFRSF13BO14836 293 aaPredicted RBP9.9□□□□□ -0.82
SRGAP3-201ENST00000360413 IGLV4-69A0A075B6H9 119 aa9.9□□□□□ -0.83
SRGAP3-201ENST00000360413 TRBV6-8A0A0A6YYG3 113 aa9.9□□□□□ -0.83
SRGAP3-201ENST00000360413 FSTL3O95633 263 aa9.9□□□□□ -0.83
SRGAP3-201ENST00000360413 LY6LH3BQJ8 138 aa9.89□□□□□ -0.83
SRGAP3-201ENST00000360413 DEFB4AO15263 64 aa9.89□□□□□ -0.83
SRGAP3-201ENST00000360413 CD164L2Q6UWJ8 174 aa9.89□□□□□ -0.83
SRGAP3-201ENST00000360413 LTBP2Q14767 1821 aa9.89□□□□□ -0.83
SRGAP3-201ENST00000360413 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.88□□□□□ -0.83
SRGAP3-201ENST00000360413 NCOR2Q9Y618 2525 aa9.88□□□□□ -0.83
SRGAP3-201ENST00000360413 NANOS2P60321 138 aaKnown RBP9.88□□□□□ -0.83
SRGAP3-201ENST00000360413 A8MZ25 164 aa9.88□□□□□ -0.83
SRGAP3-201ENST00000360413 KRTAP27-1Q3LI81 207 aa9.87□□□□□ -0.83
SRGAP3-201ENST00000360413 SMIM11BQ8TCY0 68 aa9.87□□□□□ -0.83
SRGAP3-201ENST00000360413 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
SRGAP3-201ENST00000360413 NRGNQ92686 78 aa9.87□□□□□ -0.83
SRGAP3-201ENST00000360413 PRO0628Q9UI54 55 aa9.87□□□□□ -0.83
SRGAP3-201ENST00000360413 MBD6Q96DN6 1003 aa9.87□□□□□ -0.83
SRGAP3-201ENST00000360413 F8WDY8 70 aa9.87□□□□□ -0.83
SRGAP3-201ENST00000360413 NUPR2A6NF83 97 aa9.86□□□□□ -0.83
SRGAP3-201ENST00000360413 NRACQ8N912 160 aa9.86□□□□□ -0.83
SRGAP3-201ENST00000360413 PLA2G5P39877 138 aa9.86□□□□□ -0.83
SRGAP3-201ENST00000360413 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
SRGAP3-201ENST00000360413 Q6ZQY7 126 aa9.85□□□□□ -0.83
SRGAP3-201ENST00000360413 U3KQA8 63 aa9.85□□□□□ -0.83
SRGAP3-201ENST00000360413 UNQ9165/PRO28630Q6UXU0 137 aa9.85□□□□□ -0.83
SRGAP3-201ENST00000360413 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
SRGAP3-201ENST00000360413 IGF1P05019 195 aa9.85□□□□□ -0.83
SRGAP3-201ENST00000360413 IGLV1-47P01700 117 aa9.85□□□□□ -0.83
SRGAP3-201ENST00000360413 ODF3BA8MYP8 253 aa9.84□□□□□ -0.83
SRGAP3-201ENST00000360413 MRGPRG-AS1Q2M3A8 158 aa9.84□□□□□ -0.83
SRGAP3-201ENST00000360413 LELP1Q5T871 98 aa9.84□□□□□ -0.83
SRGAP3-201ENST00000360413 XAGE1AQ9HD64 81 aa9.84□□□□□ -0.83
SRGAP3-201ENST00000360413 A6NDX4 124 aa9.84□□□□□ -0.83
SRGAP3-201ENST00000360413 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
SRGAP3-201ENST00000360413 Q6ZS46 218 aa9.83□□□□□ -0.84
SRGAP3-201ENST00000360413 TRBV7-6A0A0J9YX20 115 aa9.82□□□□□ -0.84
SRGAP3-201ENST00000360413 Q6ZSR3 168 aa9.82□□□□□ -0.84
SRGAP3-201ENST00000360413 A0A087WVE0 104 aa9.82□□□□□ -0.84
SRGAP3-201ENST00000360413 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
SRGAP3-201ENST00000360413 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
SRGAP3-201ENST00000360413 P0C879 139 aa9.82□□□□□ -0.84
SRGAP3-201ENST00000360413 M0QY20 66 aa9.81□□□□□ -0.84
SRGAP3-201ENST00000360413 DEFB114Q30KQ6 69 aa9.81□□□□□ -0.84
SRGAP3-201ENST00000360413 ZFP36P26651 326 aaKnown RBP9.81□□□□□ -0.84
SRGAP3-201ENST00000360413 Q6YL49 198 aa9.81□□□□□ -0.84
SRGAP3-201ENST00000360413 Q6ZTI0 123 aa9.81□□□□□ -0.84
SRGAP3-201ENST00000360413 COL4A6Q14031 1691 aa9.81□□□□□ -0.84
SRGAP3-201ENST00000360413 CRIP1P50238 77 aa9.81□□□□□ -0.84
SRGAP3-201ENST00000360413 LINC00208Q96KT6 92 aa9.8□□□□□ -0.84
SRGAP3-201ENST00000360413 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
SRGAP3-201ENST00000360413 K7EQG2 157 aa9.79□□□□□ -0.84
SRGAP3-201ENST00000360413 LIMD2Q9BT23 127 aa9.79□□□□□ -0.84
SRGAP3-201ENST00000360413 BEAN1Q3B7T3 259 aa9.79□□□□□ -0.84
SRGAP3-201ENST00000360413 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 ADORA2A-AS1P86434 159 aa9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 TRBV7-7A0A0K0K1E9 115 aa9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 LINC00574Q9H8X3 128 aa9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 ZNF73O43830 326 aaPredicted RBP9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 ZNF843Q8N446 348 aa9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 KPRPQ5T749 579 aaPredicted RBP9.78□□□□□ -0.84
SRGAP3-201ENST00000360413 SPTBN4Q9H254 2564 aa9.77□□□□□ -0.85
SRGAP3-201ENST00000360413 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.85
SRGAP3-201ENST00000360413 IGF2RP11717 2491 aa9.77□□□□□ -0.85
SRGAP3-201ENST00000360413 NTM-AS1Q6ZSK4 140 aa9.77□□□□□ -0.85
SRGAP3-201ENST00000360413 Q8IZM0 81 aa9.76□□□□□ -0.85
SRGAP3-201ENST00000360413 ANKRD11Q6UB99 2663 aaPredicted RBP9.76□□□□□ -0.85
SRGAP3-201ENST00000360413 CRIP2P52943 208 aaPredicted RBP9.76□□□□□ -0.85
SRGAP3-201ENST00000360413 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
SRGAP3-201ENST00000360413 ESRGQ1W209 222 aa9.75□□□□□ -0.85
SRGAP3-201ENST00000360413 PRORYQ9H606 182 aa9.75□□□□□ -0.85
SRGAP3-201ENST00000360413 Q8N3U1 123 aa9.75□□□□□ -0.85
SRGAP3-201ENST00000360413 ZNF295-AS1Q8N0V1 137 aa9.75□□□□□ -0.85
SRGAP3-201ENST00000360413 TSHBP01222 138 aa9.74□□□□□ -0.85
SRGAP3-201ENST00000360413 Q8N7P7 452 aa9.74□□□□□ -0.85
SRGAP3-201ENST00000360413 CRYGAP11844 174 aa9.74□□□□□ -0.85
SRGAP3-201ENST00000360413 PROK1P58294 105 aa9.73□□□□□ -0.85
SRGAP3-201ENST00000360413 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
SRGAP3-201ENST00000360413 POLQO75417 2590 aa9.73□□□□□ -0.85
SRGAP3-201ENST00000360413 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
SRGAP3-201ENST00000360413 EIF4EBP1Q13541 118 aaPredicted RBP9.72□□□□□ -0.85
SRGAP3-201ENST00000360413 Q8N814 137 aa9.72□□□□□ -0.85
SRGAP3-201ENST00000360413 COL4A4P53420 1690 aaPredicted RBP9.71□□□□□ -0.86
SRGAP3-201ENST00000360413 LY6G6CO95867 125 aa9.71□□□□□ -0.86
SRGAP3-201ENST00000360413 LINC01547P58512 204 aaPredicted RBP9.71□□□□□ -0.86
SRGAP3-201ENST00000360413 IGLV2-11P01706 119 aa9.71□□□□□ -0.86
SRGAP3-201ENST00000360413 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
SRGAP3-201ENST00000360413 TMEM254Q8TBM7 123 aa9.7□□□□□ -0.86
SRGAP3-201ENST00000360413 CIRBP-AS1Q8TBR5 109 aa9.7□□□□□ -0.86
SRGAP3-201ENST00000360413 A0A087WYN8 130 aa9.69□□□□□ -0.86
SRGAP3-201ENST00000360413 PSMG3-AS1Q96PY0 264 aa9.69□□□□□ -0.86
SRGAP3-201ENST00000360413 EGFEM1PQ0D2K5 195 aa9.69□□□□□ -0.86
SRGAP3-201ENST00000360413 hDV103S1A0JD37 113 aa9.68□□□□□ -0.86
SRGAP3-201ENST00000360413 H0Y9P7 68 aa9.68□□□□□ -0.86
SRGAP3-201ENST00000360413 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 Q8N6K4 173 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 C1orf137Q5JT78 98 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 SPAG11AQ6PDA7 123 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 USP9YO00507 2555 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms