RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 LINC00528Q8N1L1 170 aa4.36□□□□□ -1.71
SUDS3-201ENST00000360286 NRACQ8N912 160 aa4.36□□□□□ -1.71
SUDS3-201ENST00000360286 TM2D2Q9BX73 214 aa4.36□□□□□ -1.71
SUDS3-201ENST00000360286 KRTAP1-5Q9BYS1 174 aa4.36□□□□□ -1.71
SUDS3-201ENST00000360286 CDIP1Q9H305 208 aa4.36□□□□□ -1.71
SUDS3-201ENST00000360286 DAZ3Q9NR90 486 aaKnown RBP4.36□□□□□ -1.71
SUDS3-201ENST00000360286 FAT2Q9NYQ8 4349 aa4.36□□□□□ -1.71
SUDS3-201ENST00000360286 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 IGHV1-24A0A0C4DH33 117 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 D6R8Y8 96 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 J3QL48 77 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 M0QXV9 152 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 POLR2KP53803 58 aaKnown RBP4.35□□□□□ -1.71
SUDS3-201ENST00000360286 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 SMIM20Q8N5G0 67 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
SUDS3-201ENST00000360286 TRBV25-1A0A075B6N4 114 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 B5MCH6 92 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 I3L3M4 83 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 TNFRSF6BO95407 300 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 NPYP01303 97 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 WFDC2Q14508 124 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 PRELID3AQ96N28 172 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 CHCHD5Q9BSY4 110 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 PRO0461Q9UI25 63 aa4.34□□□□□ -1.71
SUDS3-201ENST00000360286 PKD1P98161 4303 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 LOC389332A0A1B0GUA5 103 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 VCYO14598 125 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 RTL8CO15255 209 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 APOMO95445 188 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 PPP1R17O96001 155 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 TSHBP01222 138 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 SUMO2P61956 95 aaKnown RBP4.33□□□□□ -1.72
SUDS3-201ENST00000360286 TNP2Q05952 138 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 ETDBQ3ZM63 59 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 TTC32Q5I0X7 151 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 LYRM7Q5U5X0 104 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 ORMDL3Q8N138 153 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 PPDPFLQ8WWR9 84 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 URB1-AS1Q96HZ7 61 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 CHCHD7Q9BUK0 85 aa4.33□□□□□ -1.72
SUDS3-201ENST00000360286 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.32□□□□□ -1.72
SUDS3-201ENST00000360286 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 A0A1B0GWB2 263 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 IGKV2-29A2NJV5 120 aaPredicted RBP4.32□□□□□ -1.72
SUDS3-201ENST00000360286 IBA57-AS1B1ANH7 110 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 IFITM1P13164 125 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
SUDS3-201ENST00000360286 C20orf78Q9BR46 151 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 TMEM243Q9BU79 118 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 KLK12Q9UKR0 248 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
SUDS3-201ENST00000360286 IGLV4-60A0A075B6I1 120 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 A0A1B0GX51 115 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 UBE2L6O14933 153 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 GHRHP01286 108 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 GCSHP23434 173 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 NDUFV3P56181 108 aaKnown RBP4.31□□□□□ -1.72
SUDS3-201ENST00000360286 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 GAGE2EQ4V326 116 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 C20orf203Q8NBC4 194 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 Q9HAA7 133 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 GAGE2DQ9UEU5 116 aa4.31□□□□□ -1.72
SUDS3-201ENST00000360286 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
SUDS3-201ENST00000360286 PRSS29PA6NIE9 313 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 ANGP03950 147 aaKnown RBP4.3□□□□□ -1.72
SUDS3-201ENST00000360286 FCER1GP30273 86 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 IFI27P40305 119 aaPredicted RBP4.3□□□□□ -1.72
SUDS3-201ENST00000360286 XGP55808 180 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 ENHOQ6UWT2 76 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
SUDS3-201ENST00000360286 TEN1Q86WV5 123 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 CEND1Q8N111 149 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 C10orf126Q8N4M7 172 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 RAB37Q96AX2 223 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 UBE2WQ96B02 151 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 LINC01600Q96MT4 127 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 KIR2DL4Q99706 377 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 AP5S1Q9NUS5 200 aa4.3□□□□□ -1.72
SUDS3-201ENST00000360286 EPPK1P58107 5090 aaKnown RBP4.29□□□□□ -1.72
SUDS3-201ENST00000360286 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
SUDS3-201ENST00000360286 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
SUDS3-201ENST00000360286 A4D1N5 150 aa4.29□□□□□ -1.72
SUDS3-201ENST00000360286 CLPSL2Q6UWE3 100 aa4.29□□□□□ -1.72
SUDS3-201ENST00000360286 LINC00269Q8N2A0 174 aa4.29□□□□□ -1.72
SUDS3-201ENST00000360286 Q8N8P6 123 aa4.29□□□□□ -1.72
SUDS3-201ENST00000360286 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.72
SUDS3-201ENST00000360286 IGKV2D-24A0A075B6R9 120 aa4.28□□□□□ -1.72
SUDS3-201ENST00000360286 TRAV8-3A0A0A6YYJ7 113 aa4.28□□□□□ -1.72
SUDS3-201ENST00000360286 IGKV3OR2-268A0A0C4DH90 116 aa4.28□□□□□ -1.72
SUDS3-201ENST00000360286 H7C423 109 aa4.28□□□□□ -1.72
SUDS3-201ENST00000360286 SNCGO76070 127 aa4.28□□□□□ -1.72
SUDS3-201ENST00000360286 RPL39P62891 51 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms