RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 FAM236AA0A1B0GUQ0 79 aa13.4□□□□□ -0.26
SNX11-201ENST00000359238 FAM236BA0A1B0GV22 79 aa13.4□□□□□ -0.26
SNX11-201ENST00000359238 ADAMTSL4-AS1Q5T5F5 129 aa13.4□□□□□ -0.26
SNX11-201ENST00000359238 NACAE9PAV3 2078 aa13.39□□□□□ -0.27
SNX11-201ENST00000359238 I3L3M4 83 aa13.39□□□□□ -0.27
SNX11-201ENST00000359238 DNAJC30Q96LL9 226 aa13.39□□□□□ -0.27
SNX11-201ENST00000359238 KRTAP24-1Q3LI83 254 aa13.39□□□□□ -0.27
SNX11-201ENST00000359238 SPXQ9BT56 116 aa13.39□□□□□ -0.27
SNX11-201ENST00000359238 XCL2Q9UBD3 114 aa13.38□□□□□ -0.27
SNX11-201ENST00000359238 FAM74A4Q5TZK3 123 aa13.38□□□□□ -0.27
SNX11-201ENST00000359238 C3orf22Q8N5N4 141 aa13.38□□□□□ -0.27
SNX11-201ENST00000359238 NBEAL2Q6ZNJ1 2754 aa13.37□□□□□ -0.27
SNX11-201ENST00000359238 IGHV1-58A0A0C4DH39 117 aa13.36□□□□□ -0.27
SNX11-201ENST00000359238 MRPS36P82909 103 aaKnown RBP13.36□□□□□ -0.27
SNX11-201ENST00000359238 C19orf73Q9NVV2 129 aa13.36□□□□□ -0.27
SNX11-201ENST00000359238 NDUFA12Q9UI09 145 aa13.36□□□□□ -0.27
SNX11-201ENST00000359238 C9orf153Q5TBE3 101 aa13.35□□□□□ -0.27
SNX11-201ENST00000359238 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
SNX11-201ENST00000359238 LINC00694P0DN24 101 aa13.35□□□□□ -0.27
SNX11-201ENST00000359238 STHQ8IWL8 128 aa13.35□□□□□ -0.27
SNX11-201ENST00000359238 PYGO1Q9Y3Y4 419 aa13.35□□□□□ -0.27
SNX11-201ENST00000359238 UQCRQO14949 82 aa13.34□□□□□ -0.27
SNX11-201ENST00000359238 ATP5G1P05496 136 aa13.34□□□□□ -0.27
SNX11-201ENST00000359238 LINC00643Q86TS7 51 aa13.34□□□□□ -0.27
SNX11-201ENST00000359238 GIG44P09565 113 aaPredicted RBP13.33□□□□□ -0.28
SNX11-201ENST00000359238 CEMP1Q6PRD7 247 aaPredicted RBP13.33□□□□□ -0.28
SNX11-201ENST00000359238 PRIMA1Q86XR5 153 aa13.33□□□□□ -0.28
SNX11-201ENST00000359238 IGHV3OR16-12A0A075B7B8 117 aa13.33□□□□□ -0.28
SNX11-201ENST00000359238 TIMM17BO60830 172 aa13.33□□□□□ -0.28
SNX11-201ENST00000359238 BEAN1Q3B7T3 259 aa13.33□□□□□ -0.28
SNX11-201ENST00000359238 C1orf158Q8N1D5 194 aa13.33□□□□□ -0.28
SNX11-201ENST00000359238 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
SNX11-201ENST00000359238 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
SNX11-201ENST00000359238 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
SNX11-201ENST00000359238 CMYA5Q8N3K9 4069 aa13.31□□□□□ -0.28
SNX11-201ENST00000359238 IGHV3-73A0A0B4J1V6 119 aa13.31□□□□□ -0.28
SNX11-201ENST00000359238 SMCR5Q8TEV8 140 aa13.31□□□□□ -0.28
SNX11-201ENST00000359238 FAM104AQ969W3 186 aa13.31□□□□□ -0.28
SNX11-201ENST00000359238 Q9UF83 564 aa13.31□□□□□ -0.28
SNX11-201ENST00000359238 CSDC2Q9Y534 153 aaKnown RBP13.31□□□□□ -0.28
SNX11-201ENST00000359238 NPC2P61916 151 aa13.3□□□□□ -0.28
SNX11-201ENST00000359238 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
SNX11-201ENST00000359238 C11orf72Q8NBR9 251 aa13.3□□□□□ -0.28
SNX11-201ENST00000359238 STAB1Q9NY15 2570 aa13.3□□□□□ -0.28
SNX11-201ENST00000359238 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
SNX11-201ENST00000359238 HERVK_113P63121 156 aa13.29□□□□□ -0.28
SNX11-201ENST00000359238 TINCRA0A1B0GVN0 87 aa13.28□□□□□ -0.28
SNX11-201ENST00000359238 CXCL5P42830 114 aa13.28□□□□□ -0.28
SNX11-201ENST00000359238 INSP01308 110 aa13.28□□□□□ -0.28
SNX11-201ENST00000359238 C9orf66Q5T8R8 295 aa13.28□□□□□ -0.28
SNX11-201ENST00000359238 A0A1B0GX51 115 aa13.27□□□□□ -0.28
SNX11-201ENST00000359238 C5orf38Q86SI9 138 aa13.27□□□□□ -0.29
SNX11-201ENST00000359238 COX7A2LO14548 114 aa13.26□□□□□ -0.29
SNX11-201ENST00000359238 Q6ZSN1 163 aa13.26□□□□□ -0.29
SNX11-201ENST00000359238 ANK2Q01484 3957 aa13.26□□□□□ -0.29
SNX11-201ENST00000359238 J3KT08 172 aa13.25□□□□□ -0.29
SNX11-201ENST00000359238 C5orf47Q569G3 176 aa13.25□□□□□ -0.29
SNX11-201ENST00000359238 CMC4P56277 68 aaPredicted RBP13.25□□□□□ -0.29
SNX11-201ENST00000359238 A8MZ25 164 aa13.24□□□□□ -0.29
SNX11-201ENST00000359238 COX7CP15954 63 aa13.24□□□□□ -0.29
SNX11-201ENST00000359238 LOC107984640A0A0U1RRK4 108 aa13.23□□□□□ -0.29
SNX11-201ENST00000359238 EDA2RQ9HAV5 297 aa13.23□□□□□ -0.29
SNX11-201ENST00000359238 COL6A5A8TX70 2615 aa13.23□□□□□ -0.29
SNX11-201ENST00000359238 NDUFA1O15239 70 aa13.22□□□□□ -0.29
SNX11-201ENST00000359238 DAND5Q8N907 189 aa13.22□□□□□ -0.29
SNX11-201ENST00000359238 TRACP01848 142 aa13.21□□□□□ -0.29
SNX11-201ENST00000359238 CRYGAP11844 174 aa13.21□□□□□ -0.29
SNX11-201ENST00000359238 ZNF415Q09FC8 603 aa13.21□□□□□ -0.29
SNX11-201ENST00000359238 DAZ2Q13117 558 aaKnown RBP13.21□□□□□ -0.29
SNX11-201ENST00000359238 DAZ4Q86SG3 579 aaKnown RBP13.21□□□□□ -0.29
SNX11-201ENST00000359238 CSNK1G2-AS1Q8NCQ2 148 aa13.21□□□□□ -0.29
SNX11-201ENST00000359238 DAZ3Q9NR90 486 aaKnown RBP13.21□□□□□ -0.29
SNX11-201ENST00000359238 RPS28P62857 69 aaKnown RBP13.21□□□□□ -0.3
SNX11-201ENST00000359238 CIRBPQ14011 172 aaKnown RBP13.21□□□□□ -0.3
SNX11-201ENST00000359238 RNASE13Q5GAN3 156 aaKnown RBP13.21□□□□□ -0.3
SNX11-201ENST00000359238 C2orf48Q96LS8 159 aa13.21□□□□□ -0.3
SNX11-201ENST00000359238 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
SNX11-201ENST00000359238 LINC00308Q8TCZ7 52 aa13.2□□□□□ -0.3
SNX11-201ENST00000359238 LINC00467Q9BRT7 94 aa13.19□□□□□ -0.3
SNX11-201ENST00000359238 KLK5Q9Y337 293 aaPredicted RBP13.19□□□□□ -0.3
SNX11-201ENST00000359238 SMIM9A6NGZ8 99 aa13.19□□□□□ -0.3
SNX11-201ENST00000359238 HIST1H4AP62805 103 aaKnown RBP13.19□□□□□ -0.3
SNX11-201ENST00000359238 PLAC8L1A1L4L8 177 aa13.18□□□□□ -0.3
SNX11-201ENST00000359238 BAALC-AS2P0C853 105 aa13.18□□□□□ -0.3
SNX11-201ENST00000359238 FAM19A5Q7Z5A7 132 aaPredicted RBP13.18□□□□□ -0.3
SNX11-201ENST00000359238 IL17DQ8TAD2 202 aa13.18□□□□□ -0.3
SNX11-201ENST00000359238 FAM222AQ5U5X8 452 aa13.18□□□□□ -0.3
SNX11-201ENST00000359238 GAGE2AQ6NT46 116 aa13.18□□□□□ -0.3
SNX11-201ENST00000359238 UBE2D4Q9Y2X8 147 aa13.18□□□□□ -0.3
SNX11-201ENST00000359238 Q6ZTI0 123 aa13.17□□□□□ -0.3
SNX11-201ENST00000359238 ATOX1O00244 68 aa13.17□□□□□ -0.3
SNX11-201ENST00000359238 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
SNX11-201ENST00000359238 TIRAPP58753 221 aa13.17□□□□□ -0.3
SNX11-201ENST00000359238 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
SNX11-201ENST00000359238 C22orf24Q9Y442 160 aa13.17□□□□□ -0.3
SNX11-201ENST00000359238 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
SNX11-201ENST00000359238 IGLV5-45A0A087WSX0 123 aa13.16□□□□□ -0.3
SNX11-201ENST00000359238 TRGV1A0A0A0MS02 117 aa13.14□□□□□ -0.31
SNX11-201ENST00000359238 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
SNX11-201ENST00000359238 OXLD1Q5BKU9 147 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms