RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TMEM254Q8TBM7 123 aa9.41□□□□□ -0.9
SMC4-202ENST00000357388 SONP18583 2426 aaKnown RBP9.41□□□□□ -0.9
SMC4-202ENST00000357388 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
SMC4-202ENST00000357388 PSPHP1O15172 72 aa9.4□□□□□ -0.9
SMC4-202ENST00000357388 C1orf137Q5JT78 98 aa9.4□□□□□ -0.9
SMC4-202ENST00000357388 CDC42SE2Q9NRR3 84 aa9.4□□□□□ -0.9
SMC4-202ENST00000357388 PROK1P58294 105 aa9.39□□□□□ -0.91
SMC4-202ENST00000357388 NUP210Q8TEM1 1887 aaPredicted RBP9.39□□□□□ -0.91
SMC4-202ENST00000357388 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
SMC4-202ENST00000357388 M0R2N4 97 aa9.39□□□□□ -0.91
SMC4-202ENST00000357388 BBC3Q96PG8 261 aaPredicted RBP9.39□□□□□ -0.91
SMC4-202ENST00000357388 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
SMC4-202ENST00000357388 FRMPD3Q5JV73 1810 aa9.39□□□□□ -0.91
SMC4-202ENST00000357388 CXCL6P80162 114 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 BDP1A6H8Y1 2624 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 IGHV4-30-4P0DP06 118 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 LINC00310P59036 64 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 NUPR2A6NF83 97 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 F8WDY8 70 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 CRIP3Q6Q6R5 217 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
SMC4-202ENST00000357388 C1orf229Q6ZS94 237 aaPredicted RBP9.37□□□□□ -0.91
SMC4-202ENST00000357388 H0Y9P7 68 aa9.36□□□□□ -0.91
SMC4-202ENST00000357388 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
SMC4-202ENST00000357388 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
SMC4-202ENST00000357388 CACNA1AO00555 2505 aa9.36□□□□□ -0.91
SMC4-202ENST00000357388 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
SMC4-202ENST00000357388 LINC00242Q5T6M2 205 aa9.36□□□□□ -0.91
SMC4-202ENST00000357388 ZNF702PQ9H963 129 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 SORL1Q92673 2214 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 SMIM1B2RUZ4 78 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 FSHBP01225 129 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 CRYGAP11844 174 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 A0A087WYN8 130 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 OTOGLQ3ZCN5 2332 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 C11orf71Q6IPW1 123 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 URB1-AS1Q96HZ7 61 aa9.35□□□□□ -0.91
SMC4-202ENST00000357388 SPG11Q96JI7 2443 aa9.34□□□□□ -0.91
SMC4-202ENST00000357388 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
SMC4-202ENST00000357388 PRR9Q5T870 116 aa9.34□□□□□ -0.91
SMC4-202ENST00000357388 ANKHD1Q8IWZ3 2542 aaKnown RBP9.34□□□□□ -0.91
SMC4-202ENST00000357388 CYSRT1A8MQ03 144 aa9.34□□□□□ -0.91
SMC4-202ENST00000357388 Q8N6K4 173 aa9.33□□□□□ -0.92
SMC4-202ENST00000357388 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
SMC4-202ENST00000357388 BEAN1Q3B7T3 259 aa9.33□□□□□ -0.92
SMC4-202ENST00000357388 NANOS2P60321 138 aaKnown RBP9.33□□□□□ -0.92
SMC4-202ENST00000357388 CUL9Q8IWT3 2517 aa9.32□□□□□ -0.92
SMC4-202ENST00000357388 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
SMC4-202ENST00000357388 CSPG4Q6UVK1 2322 aa9.32□□□□□ -0.92
SMC4-202ENST00000357388 HCG22E2RYF7 251 aa9.32□□□□□ -0.92
SMC4-202ENST00000357388 WISP2O76076 250 aa9.32□□□□□ -0.92
SMC4-202ENST00000357388 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
SMC4-202ENST00000357388 REG3GQ6UW15 175 aa9.31□□□□□ -0.92
SMC4-202ENST00000357388 AMELXQ99217 191 aa9.31□□□□□ -0.92
SMC4-202ENST00000357388 LINC00575Q6W349 94 aa9.3□□□□□ -0.92
SMC4-202ENST00000357388 CDIP1Q9H305 208 aa9.3□□□□□ -0.92
SMC4-202ENST00000357388 ANAPC1Q9H1A4 1944 aa9.3□□□□□ -0.92
SMC4-202ENST00000357388 PTPN13Q12923 2485 aa9.3□□□□□ -0.92
SMC4-202ENST00000357388 LOC100131303A0A0U1RQF7 123 aa9.29□□□□□ -0.92
SMC4-202ENST00000357388 GAS8-AS1O95177 125 aa9.29□□□□□ -0.92
SMC4-202ENST00000357388 COX8CQ7Z4L0 72 aa9.29□□□□□ -0.92
SMC4-202ENST00000357388 TSPEAR-AS2P59090 65 aa9.28□□□□□ -0.92
SMC4-202ENST00000357388 PCOTHQ58A44 107 aa9.28□□□□□ -0.92
SMC4-202ENST00000357388 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
SMC4-202ENST00000357388 TTC28Q96AY4 2481 aa9.28□□□□□ -0.92
SMC4-202ENST00000357388 PLA2G2AP14555 144 aa9.27□□□□□ -0.92
SMC4-202ENST00000357388 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
SMC4-202ENST00000357388 C10orf99Q6UWK7 81 aa9.27□□□□□ -0.93
SMC4-202ENST00000357388 TMEM131Q92545 1883 aa9.27□□□□□ -0.93
SMC4-202ENST00000357388 TECTAO75443 2155 aa9.27□□□□□ -0.93
SMC4-202ENST00000357388 SPAG11AQ6PDA7 123 aa9.26□□□□□ -0.93
SMC4-202ENST00000357388 NOTCH4Q99466 2003 aa9.26□□□□□ -0.93
SMC4-202ENST00000357388 COL4A3Q01955 1670 aa9.25□□□□□ -0.93
SMC4-202ENST00000357388 UNQ6190/PRO20217Q6UXQ8 127 aa9.25□□□□□ -0.93
SMC4-202ENST00000357388 IGLV1-40P01703 118 aa9.25□□□□□ -0.93
SMC4-202ENST00000357388 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
SMC4-202ENST00000357388 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
SMC4-202ENST00000357388 A0A1B0GW54 56 aa9.25□□□□□ -0.93
SMC4-202ENST00000357388 PLXNB3Q9ULL4 1909 aa9.24□□□□□ -0.93
SMC4-202ENST00000357388 H3BPC8 53 aa9.24□□□□□ -0.93
SMC4-202ENST00000357388 IGLV5-52A0A0A0MRZ9 124 aa9.24□□□□□ -0.93
SMC4-202ENST00000357388 OXLD1Q5BKU9 147 aa9.24□□□□□ -0.93
SMC4-202ENST00000357388 C1orf64Q8NEQ6 169 aa9.24□□□□□ -0.93
SMC4-202ENST00000357388 Q9BRP9 147 aa9.23□□□□□ -0.93
SMC4-202ENST00000357388 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
SMC4-202ENST00000357388 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
SMC4-202ENST00000357388 COX6A2Q02221 97 aa9.22□□□□□ -0.93
SMC4-202ENST00000357388 A0A1B0GU69 56 aa9.22□□□□□ -0.93
SMC4-202ENST00000357388 DOPEY1Q5JWR5 2465 aa9.21□□□□□ -0.94
SMC4-202ENST00000357388 DSCAML1Q8TD84 2053 aa9.21□□□□□ -0.94
SMC4-202ENST00000357388 A0A087WSZ3 146 aa9.21□□□□□ -0.94
SMC4-202ENST00000357388 A0A096LNJ9 63 aa9.21□□□□□ -0.94
SMC4-202ENST00000357388 NAV3Q8IVL0 2385 aa9.2□□□□□ -0.94
SMC4-202ENST00000357388 DSCAMO60469 2012 aa9.19□□□□□ -0.94
SMC4-202ENST00000357388 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
SMC4-202ENST00000357388 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
SMC4-202ENST00000357388 ACYP2P14621 99 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms