RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 MAST4O15021 2626 aa8.76□□□□□ -1.01
SIRPA-201ENST00000356025 IFITM1P13164 125 aa8.76□□□□□ -1.01
SIRPA-201ENST00000356025 DEFB135Q30KP9 77 aa8.76□□□□□ -1.01
SIRPA-201ENST00000356025 J3QKU1 62 aa8.75□□□□□ -1.01
SIRPA-201ENST00000356025 RPL32P62910 135 aaKnown RBP8.75□□□□□ -1.01
SIRPA-201ENST00000356025 HERVK_113P63121 156 aa8.75□□□□□ -1.01
SIRPA-201ENST00000356025 CCDC179H3BU77 68 aa8.75□□□□□ -1.01
SIRPA-201ENST00000356025 GYPEP15421 78 aa8.75□□□□□ -1.01
SIRPA-201ENST00000356025 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
SIRPA-201ENST00000356025 TMEM263Q8WUH6 116 aaKnown RBP8.74□□□□□ -1.01
SIRPA-201ENST00000356025 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
SIRPA-201ENST00000356025 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
SIRPA-201ENST00000356025 DNAL4O96015 105 aa8.73□□□□□ -1.01
SIRPA-201ENST00000356025 NOTCH1P46531 2555 aa8.73□□□□□ -1.01
SIRPA-201ENST00000356025 F5H768 121 aa8.73□□□□□ -1.01
SIRPA-201ENST00000356025 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
SIRPA-201ENST00000356025 Q9HAA7 133 aa8.73□□□□□ -1.01
SIRPA-201ENST00000356025 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
SIRPA-201ENST00000356025 LINC00242Q5T6M2 205 aa8.72□□□□□ -1.01
SIRPA-201ENST00000356025 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.72□□□□□ -1.01
SIRPA-201ENST00000356025 MIAQ16674 131 aa8.72□□□□□ -1.01
SIRPA-201ENST00000356025 CRPP02741 224 aa8.72□□□□□ -1.01
SIRPA-201ENST00000356025 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
SIRPA-201ENST00000356025 MALP21145 153 aa8.71□□□□□ -1.01
SIRPA-201ENST00000356025 DNAJC30Q96LL9 226 aa8.71□□□□□ -1.01
SIRPA-201ENST00000356025 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.01
SIRPA-201ENST00000356025 PYGO1Q9Y3Y4 419 aa8.71□□□□□ -1.02
SIRPA-201ENST00000356025 INAFM1C9JVW0 142 aa8.7□□□□□ -1.02
SIRPA-201ENST00000356025 LINC00526Q96FQ7 95 aa8.7□□□□□ -1.02
SIRPA-201ENST00000356025 CR1P17927 2039 aa8.7□□□□□ -1.02
SIRPA-201ENST00000356025 ANGP03950 147 aaKnown RBP8.7□□□□□ -1.02
SIRPA-201ENST00000356025 DAZ2Q13117 558 aaKnown RBP8.7□□□□□ -1.02
SIRPA-201ENST00000356025 NTM-AS1Q6ZSK4 140 aa8.7□□□□□ -1.02
SIRPA-201ENST00000356025 DAZ4Q86SG3 579 aaKnown RBP8.7□□□□□ -1.02
SIRPA-201ENST00000356025 AMELXQ99217 191 aa8.7□□□□□ -1.02
SIRPA-201ENST00000356025 DAZ3Q9NR90 486 aaKnown RBP8.7□□□□□ -1.02
SIRPA-201ENST00000356025 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
SIRPA-201ENST00000356025 ATP5G1P05496 136 aa8.7□□□□□ -1.02
SIRPA-201ENST00000356025 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
SIRPA-201ENST00000356025 C16orf74Q96GX8 76 aa8.69□□□□□ -1.02
SIRPA-201ENST00000356025 MGAM2Q2M2H8 2515 aa8.69□□□□□ -1.02
SIRPA-201ENST00000356025 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
SIRPA-201ENST00000356025 NBEAL1Q6ZS30 2694 aa8.69□□□□□ -1.02
SIRPA-201ENST00000356025 RNF152Q8N8N0 203 aa8.68□□□□□ -1.02
SIRPA-201ENST00000356025 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
SIRPA-201ENST00000356025 LRRC75A-AS1Q8N1F1 130 aa8.68□□□□□ -1.02
SIRPA-201ENST00000356025 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
SIRPA-201ENST00000356025 A0A0B4J2C4 111 aa8.67□□□□□ -1.02
SIRPA-201ENST00000356025 H7C423 109 aa8.67□□□□□ -1.02
SIRPA-201ENST00000356025 FSHBP01225 129 aa8.67□□□□□ -1.02
SIRPA-201ENST00000356025 CFAP161Q6P656 301 aa8.67□□□□□ -1.02
SIRPA-201ENST00000356025 TRAV25A0A0B4J276 109 aa8.67□□□□□ -1.02
SIRPA-201ENST00000356025 DAD1P61803 113 aa8.67□□□□□ -1.02
SIRPA-201ENST00000356025 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
SIRPA-201ENST00000356025 FAM222AQ5U5X8 452 aa8.66□□□□□ -1.02
SIRPA-201ENST00000356025 STAB1Q9NY15 2570 aa8.66□□□□□ -1.02
SIRPA-201ENST00000356025 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
SIRPA-201ENST00000356025 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
SIRPA-201ENST00000356025 CDC42SE2Q9NRR3 84 aa8.66□□□□□ -1.02
SIRPA-201ENST00000356025 SMIM1B2RUZ4 78 aa8.65□□□□□ -1.02
SIRPA-201ENST00000356025 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.03
SIRPA-201ENST00000356025 HERV-K104P63124 156 aa8.65□□□□□ -1.03
SIRPA-201ENST00000356025 SS18Q15532 418 aa8.65□□□□□ -1.03
SIRPA-201ENST00000356025 HIVEP1P15822 2718 aa8.64□□□□□ -1.03
SIRPA-201ENST00000356025 SLPIP03973 132 aa8.64□□□□□ -1.03
SIRPA-201ENST00000356025 TRBV10-1A0A0K0K1A3 114 aa8.64□□□□□ -1.03
SIRPA-201ENST00000356025 Q8N2B8 174 aa8.64□□□□□ -1.03
SIRPA-201ENST00000356025 LY6G6DO95868 133 aa8.64□□□□□ -1.03
SIRPA-201ENST00000356025 CMC4P56277 68 aaPredicted RBP8.64□□□□□ -1.03
SIRPA-201ENST00000356025 TMEM86BQ8N661 226 aa8.64□□□□□ -1.03
SIRPA-201ENST00000356025 COPS9Q8WXC6 57 aa8.64□□□□□ -1.03
SIRPA-201ENST00000356025 BEAN1Q3B7T3 259 aa8.63□□□□□ -1.03
SIRPA-201ENST00000356025 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
SIRPA-201ENST00000356025 NDUFA1O15239 70 aa8.63□□□□□ -1.03
SIRPA-201ENST00000356025 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
SIRPA-201ENST00000356025 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
SIRPA-201ENST00000356025 Q8N3U1 123 aa8.62□□□□□ -1.03
SIRPA-201ENST00000356025 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
SIRPA-201ENST00000356025 TIRAPP58753 221 aa8.62□□□□□ -1.03
SIRPA-201ENST00000356025 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
SIRPA-201ENST00000356025 IGLV1-51P01701 117 aa8.61□□□□□ -1.03
SIRPA-201ENST00000356025 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
SIRPA-201ENST00000356025 EDA2RQ9HAV5 297 aa8.61□□□□□ -1.03
SIRPA-201ENST00000356025 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
SIRPA-201ENST00000356025 FAM110AQ9BQ89 295 aa8.61□□□□□ -1.03
SIRPA-201ENST00000356025 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
SIRPA-201ENST00000356025 FAM104AQ969W3 186 aa8.6□□□□□ -1.03
SIRPA-201ENST00000356025 NHLRC4P0CG21 123 aaPredicted RBP8.6□□□□□ -1.03
SIRPA-201ENST00000356025 LECT2O14960 151 aa8.6□□□□□ -1.03
SIRPA-201ENST00000356025 C9orf116Q5BN46 136 aaPredicted RBP8.6□□□□□ -1.03
SIRPA-201ENST00000356025 LITAFQ99732 161 aa8.6□□□□□ -1.03
SIRPA-201ENST00000356025 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
SIRPA-201ENST00000356025 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
SIRPA-201ENST00000356025 KLK12Q9UKR0 248 aa8.59□□□□□ -1.03
SIRPA-201ENST00000356025 SPATA3Q8NHX4 192 aa8.59□□□□□ -1.03
SIRPA-201ENST00000356025 IGKV3D-7A0A0C4DH55 119 aa8.59□□□□□ -1.03
SIRPA-201ENST00000356025 FHL2Q14192 279 aa8.59□□□□□ -1.03
SIRPA-201ENST00000356025 CITED1Q99966 193 aa8.59□□□□□ -1.03
SIRPA-201ENST00000356025 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
SIRPA-201ENST00000356025 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms