RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ZC2HC1BQ5TFG8 222 aa10.26□□□□□ -0.77
TRIM13-201ENST00000356017 CFAP161Q6P656 301 aa10.26□□□□□ -0.77
TRIM13-201ENST00000356017 CST9LQ9H4G1 147 aa10.26□□□□□ -0.77
TRIM13-201ENST00000356017 USP17L23D6RBM5 183 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 LEPROTL1O95214 131 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 FAM19A3Q7Z5A8 133 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 Q8N814 137 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 DNAH10Q8IVF4 4471 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 A0A1B0GVY2 172 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 COX7A2LO14548 114 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 LECT2O14960 151 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 PYY3Q5JQD4 70 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 IFI27L1Q96BM0 104 aa10.25□□□□□ -0.77
TRIM13-201ENST00000356017 PACRGQ96M98 296 aaPredicted RBP10.25□□□□□ -0.77
TRIM13-201ENST00000356017 IGHV3OR16-9A0A0B4J2B5 98 aa10.24□□□□□ -0.77
TRIM13-201ENST00000356017 MALP21145 153 aa10.24□□□□□ -0.77
TRIM13-201ENST00000356017 WFDC2Q14508 124 aa10.24□□□□□ -0.77
TRIM13-201ENST00000356017 HSPB8Q9UJY1 196 aa10.24□□□□□ -0.77
TRIM13-201ENST00000356017 DNAH17Q9UFH2 4485 aa10.24□□□□□ -0.77
TRIM13-201ENST00000356017 PRSS1P07477 247 aa10.23□□□□□ -0.77
TRIM13-201ENST00000356017 HERVK_113P63121 156 aa10.23□□□□□ -0.77
TRIM13-201ENST00000356017 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
TRIM13-201ENST00000356017 PGPEP1Q9NXJ5 209 aa10.23□□□□□ -0.77
TRIM13-201ENST00000356017 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
TRIM13-201ENST00000356017 GEMIN7Q9H840 131 aaKnown RBP10.22□□□□□ -0.77
TRIM13-201ENST00000356017 FAT2Q9NYQ8 4349 aa10.22□□□□□ -0.77
TRIM13-201ENST00000356017 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
TRIM13-201ENST00000356017 APOMO95445 188 aa10.22□□□□□ -0.77
TRIM13-201ENST00000356017 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
TRIM13-201ENST00000356017 C5orf38Q86SI9 138 aa10.22□□□□□ -0.77
TRIM13-201ENST00000356017 TINCRA0A1B0GVN0 87 aa10.21□□□□□ -0.78
TRIM13-201ENST00000356017 A0A087WZ39 114 aa10.2□□□□□ -0.78
TRIM13-201ENST00000356017 TRAV12-1A0A0B4J245 112 aa10.2□□□□□ -0.78
TRIM13-201ENST00000356017 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
TRIM13-201ENST00000356017 COX6A2Q02221 97 aa10.2□□□□□ -0.78
TRIM13-201ENST00000356017 hDV102S1A0JD36 115 aa10.19□□□□□ -0.78
TRIM13-201ENST00000356017 LINC01561Q8N1V8 128 aa10.19□□□□□ -0.78
TRIM13-201ENST00000356017 C15orf56Q8N910 161 aa10.19□□□□□ -0.78
TRIM13-201ENST00000356017 GVQW2A0A096LPI5 108 aaPredicted RBP10.18□□□□□ -0.78
TRIM13-201ENST00000356017 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
TRIM13-201ENST00000356017 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
TRIM13-201ENST00000356017 MAP1LC3CQ9BXW4 147 aa10.18□□□□□ -0.78
TRIM13-201ENST00000356017 CHTOPQ9Y3Y2 248 aaKnown RBP10.18□□□□□ -0.78
TRIM13-201ENST00000356017 IGLV5-52A0A0A0MRZ9 124 aa10.17□□□□□ -0.78
TRIM13-201ENST00000356017 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
TRIM13-201ENST00000356017 IGLC3P0DOY3 106 aa10.17□□□□□ -0.78
TRIM13-201ENST00000356017 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
TRIM13-201ENST00000356017 LINC00469Q8N7U9 141 aa10.17□□□□□ -0.78
TRIM13-201ENST00000356017 CDKN2A-AS1Q9UH64 79 aa10.17□□□□□ -0.78
TRIM13-201ENST00000356017 IGHV3-64A0A075B6Q5 118 aa10.16□□□□□ -0.78
TRIM13-201ENST00000356017 IGLV5-45A0A087WSX0 123 aa10.16□□□□□ -0.78
TRIM13-201ENST00000356017 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
TRIM13-201ENST00000356017 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
TRIM13-201ENST00000356017 F8VRH5 84 aa10.15□□□□□ -0.78
TRIM13-201ENST00000356017 H3BRM9 83 aa10.15□□□□□ -0.78
TRIM13-201ENST00000356017 HIGD2BQ4VC39 106 aa10.15□□□□□ -0.78
TRIM13-201ENST00000356017 IGLV4-69A0A075B6H9 119 aa10.15□□□□□ -0.79
TRIM13-201ENST00000356017 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.15□□□□□ -0.79
TRIM13-201ENST00000356017 H0Y8G0 127 aa10.15□□□□□ -0.79
TRIM13-201ENST00000356017 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.79
TRIM13-201ENST00000356017 C16orf90A8MZG2 172 aa10.14□□□□□ -0.79
TRIM13-201ENST00000356017 ORAOV1Q8WV07 137 aa10.14□□□□□ -0.79
TRIM13-201ENST00000356017 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
TRIM13-201ENST00000356017 ODF1Q14990 250 aa10.13□□□□□ -0.79
TRIM13-201ENST00000356017 MRPL35Q9NZE8 188 aaKnown RBP10.13□□□□□ -0.79
TRIM13-201ENST00000356017 F8WDY8 70 aa10.12□□□□□ -0.79
TRIM13-201ENST00000356017 C2orf48Q96LS8 159 aa10.12□□□□□ -0.79
TRIM13-201ENST00000356017 PKD1P98161 4303 aa10.12□□□□□ -0.79
TRIM13-201ENST00000356017 HECTD4Q9Y4D8 3996 aa10.12□□□□□ -0.79
TRIM13-201ENST00000356017 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
TRIM13-201ENST00000356017 GCSHP23434 173 aa10.11□□□□□ -0.79
TRIM13-201ENST00000356017 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRIM13-201ENST00000356017 SYS1-DBNDD2H3BUS1 97 aa10.11□□□□□ -0.79
TRIM13-201ENST00000356017 ZNF22P17026 224 aaPredicted RBP10.11□□□□□ -0.79
TRIM13-201ENST00000356017 PLNP26678 52 aa10.11□□□□□ -0.79
TRIM13-201ENST00000356017 TMEM170BQ5T4T1 132 aa10.11□□□□□ -0.79
TRIM13-201ENST00000356017 SMIM1B2RUZ4 78 aa10.1□□□□□ -0.79
TRIM13-201ENST00000356017 SLPIP03973 132 aa10.1□□□□□ -0.79
TRIM13-201ENST00000356017 PRSS2P07478 247 aa10.1□□□□□ -0.79
TRIM13-201ENST00000356017 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
TRIM13-201ENST00000356017 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
TRIM13-201ENST00000356017 CAMK2N2Q96S95 79 aa10.1□□□□□ -0.79
TRIM13-201ENST00000356017 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
TRIM13-201ENST00000356017 PET117Q6UWS5 81 aa10.09□□□□□ -0.79
TRIM13-201ENST00000356017 Q8IZM0 81 aa10.09□□□□□ -0.79
TRIM13-201ENST00000356017 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
TRIM13-201ENST00000356017 SPINK8P0C7L1 97 aa10.08□□□□□ -0.8
TRIM13-201ENST00000356017 C6orf226Q5I0X4 101 aa10.08□□□□□ -0.8
TRIM13-201ENST00000356017 CARD19Q96LW7 228 aa10.08□□□□□ -0.8
TRIM13-201ENST00000356017 TOMM7Q9P0U1 55 aa10.08□□□□□ -0.8
TRIM13-201ENST00000356017 DNAH11Q96DT5 4516 aa10.08□□□□□ -0.8
TRIM13-201ENST00000356017 DPM2O94777 84 aa10.07□□□□□ -0.8
TRIM13-201ENST00000356017 C3orf79P0CE67 100 aa10.07□□□□□ -0.8
TRIM13-201ENST00000356017 KRTDAPP60985 99 aa10.07□□□□□ -0.8
TRIM13-201ENST00000356017 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
TRIM13-201ENST00000356017 NDUFA1O15239 70 aa10.07□□□□□ -0.8
TRIM13-201ENST00000356017 CKS1BP61024 79 aa10.07□□□□□ -0.8
TRIM13-201ENST00000356017 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
TRIM13-201ENST00000356017 IGKCP01834 107 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms