RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HERVK_113P63121 156 aa9.32□□□□□ -0.92
HOXA1-202ENST00000355633 TMEM223A0PJW6 202 aa9.31□□□□□ -0.92
HOXA1-202ENST00000355633 COX6A2Q02221 97 aa9.31□□□□□ -0.92
HOXA1-202ENST00000355633 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
HOXA1-202ENST00000355633 HINT1P49773 126 aaPredicted RBP9.31□□□□□ -0.92
HOXA1-202ENST00000355633 SLC25A34Q6PIV7 304 aa9.31□□□□□ -0.92
HOXA1-202ENST00000355633 CLPSL2Q6UWE3 100 aa9.31□□□□□ -0.92
HOXA1-202ENST00000355633 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
HOXA1-202ENST00000355633 LINC00959A0A1B0GUT2 108 aa9.3□□□□□ -0.92
HOXA1-202ENST00000355633 LINC00269Q8N2A0 174 aa9.3□□□□□ -0.92
HOXA1-202ENST00000355633 IGHV3-30P01768 117 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 IGHV3-33P01772 117 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 IGHV3-30-3P0DP02 117 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 IGHV3-30-5P0DP03 117 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 TP73-AS1Q9UF72 201 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 CDKN2A-AS1Q9UH64 79 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 PRKDCP78527 4128 aaKnown RBP9.29□□□□□ -0.92
HOXA1-202ENST00000355633 MEGF8Q7Z7M0 2845 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 H3BRM9 83 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 REG3AQ06141 175 aa9.29□□□□□ -0.92
HOXA1-202ENST00000355633 CCL18P55774 89 aa9.28□□□□□ -0.92
HOXA1-202ENST00000355633 SS18Q15532 418 aa9.28□□□□□ -0.92
HOXA1-202ENST00000355633 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
HOXA1-202ENST00000355633 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
HOXA1-202ENST00000355633 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.92
HOXA1-202ENST00000355633 KLK12Q9UKR0 248 aa9.27□□□□□ -0.92
HOXA1-202ENST00000355633 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.92
HOXA1-202ENST00000355633 NUPR2A6NF83 97 aa9.27□□□□□ -0.93
HOXA1-202ENST00000355633 SPINK8P0C7L1 97 aa9.27□□□□□ -0.93
HOXA1-202ENST00000355633 STAB2Q8WWQ8 2551 aa9.27□□□□□ -0.93
HOXA1-202ENST00000355633 LEPROTO15243 131 aa9.26□□□□□ -0.93
HOXA1-202ENST00000355633 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
HOXA1-202ENST00000355633 IGHV1-58A0A0C4DH39 117 aa9.26□□□□□ -0.93
HOXA1-202ENST00000355633 LINC01556Q5JQF7 62 aa9.26□□□□□ -0.93
HOXA1-202ENST00000355633 KLK5Q9Y337 293 aaPredicted RBP9.26□□□□□ -0.93
HOXA1-202ENST00000355633 J3QQQ9 107 aa9.25□□□□□ -0.93
HOXA1-202ENST00000355633 Q6ZVH6 145 aa9.25□□□□□ -0.93
HOXA1-202ENST00000355633 MAPKAPK5-AS1Q8N8E1 139 aa9.25□□□□□ -0.93
HOXA1-202ENST00000355633 PLEKHB2Q96CS7 222 aa9.25□□□□□ -0.93
HOXA1-202ENST00000355633 PRR34Q9NV39 138 aa9.25□□□□□ -0.93
HOXA1-202ENST00000355633 APLNQ9ULZ1 77 aa9.25□□□□□ -0.93
HOXA1-202ENST00000355633 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
HOXA1-202ENST00000355633 CRPP02741 224 aa9.24□□□□□ -0.93
HOXA1-202ENST00000355633 LGALS3P17931 250 aaKnown RBP9.24□□□□□ -0.93
HOXA1-202ENST00000355633 XCL1P47992 114 aa9.24□□□□□ -0.93
HOXA1-202ENST00000355633 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
HOXA1-202ENST00000355633 MYMXA0A1B0GTQ4 84 aa9.24□□□□□ -0.93
HOXA1-202ENST00000355633 TAX1BP3O14907 124 aa9.24□□□□□ -0.93
HOXA1-202ENST00000355633 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
HOXA1-202ENST00000355633 ZNF815PA8K554 130 aa9.23□□□□□ -0.93
HOXA1-202ENST00000355633 SMIM1B2RUZ4 78 aa9.23□□□□□ -0.93
HOXA1-202ENST00000355633 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
HOXA1-202ENST00000355633 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
HOXA1-202ENST00000355633 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-202ENST00000355633 UBE2WQ96B02 151 aa9.23□□□□□ -0.93
HOXA1-202ENST00000355633 SIVA1O15304 175 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 UPK3BQ9BT76 320 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 A0A087WZ39 114 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 GTF2H5Q6ZYL4 71 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 C5orf38Q86SI9 138 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 MTURNQ8N3F0 131 aa9.22□□□□□ -0.93
HOXA1-202ENST00000355633 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.93
HOXA1-202ENST00000355633 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
HOXA1-202ENST00000355633 MIAQ16674 131 aa9.2□□□□□ -0.94
HOXA1-202ENST00000355633 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
HOXA1-202ENST00000355633 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
HOXA1-202ENST00000355633 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
HOXA1-202ENST00000355633 HIGD1BQ9P298 99 aa9.19□□□□□ -0.94
HOXA1-202ENST00000355633 GAGE12HA6NDE8 117 aa9.18□□□□□ -0.94
HOXA1-202ENST00000355633 COX7A2LO14548 114 aa9.18□□□□□ -0.94
HOXA1-202ENST00000355633 FOXI1Q12951 378 aa9.18□□□□□ -0.94
HOXA1-202ENST00000355633 LINC01561Q8N1V8 128 aa9.18□□□□□ -0.94
HOXA1-202ENST00000355633 SIGMAR1Q99720 223 aa9.18□□□□□ -0.94
HOXA1-202ENST00000355633 Q9H8V8 135 aa9.18□□□□□ -0.94
HOXA1-202ENST00000355633 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
HOXA1-202ENST00000355633 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
HOXA1-202ENST00000355633 BVES-AS1Q5T3Y7 98 aa9.17□□□□□ -0.94
HOXA1-202ENST00000355633 TOMM7Q9P0U1 55 aa9.17□□□□□ -0.94
HOXA1-202ENST00000355633 MALP21145 153 aa9.16□□□□□ -0.94
HOXA1-202ENST00000355633 COX7B2Q8TF08 81 aa9.16□□□□□ -0.94
HOXA1-202ENST00000355633 C10orf126Q8N4M7 172 aa9.15□□□□□ -0.94
HOXA1-202ENST00000355633 C1orf43Q9BWL3 253 aa9.15□□□□□ -0.94
HOXA1-202ENST00000355633 FBN3Q75N90 2809 aa9.15□□□□□ -0.94
HOXA1-202ENST00000355633 IBA57-AS1B1ANH7 110 aa9.15□□□□□ -0.94
HOXA1-202ENST00000355633 NDUFA1O15239 70 aa9.15□□□□□ -0.94
HOXA1-202ENST00000355633 MUC7Q8TAX7 377 aa9.15□□□□□ -0.94
HOXA1-202ENST00000355633 CKS1BP61024 79 aa9.14□□□□□ -0.95
HOXA1-202ENST00000355633 HSD52Q0P140 79 aa9.14□□□□□ -0.95
HOXA1-202ENST00000355633 Q9HAA7 133 aa9.14□□□□□ -0.95
HOXA1-202ENST00000355633 A0A0J9YXY3 114 aa9.14□□□□□ -0.95
HOXA1-202ENST00000355633 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
HOXA1-202ENST00000355633 IGKV2D-24A0A075B6R9 120 aa9.13□□□□□ -0.95
HOXA1-202ENST00000355633 APOMO95445 188 aa9.13□□□□□ -0.95
HOXA1-202ENST00000355633 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
HOXA1-202ENST00000355633 WWC2-AS2Q96NR7 200 aa9.13□□□□□ -0.95
HOXA1-202ENST00000355633 PRSS2P07478 247 aa9.12□□□□□ -0.95
HOXA1-202ENST00000355633 Q8IZM0 81 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms