RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SLURP1P55000 103 aa6.83□□□□□ -1.32
SMG6-202ENST00000354901 MIAQ16674 131 aa6.83□□□□□ -1.32
SMG6-202ENST00000354901 Q8N2B8 174 aa6.83□□□□□ -1.32
SMG6-202ENST00000354901 K7EQG2 157 aa6.82□□□□□ -1.32
SMG6-202ENST00000354901 ATP5G1P05496 136 aa6.82□□□□□ -1.32
SMG6-202ENST00000354901 RNASE1P07998 156 aaKnown RBP6.82□□□□□ -1.32
SMG6-202ENST00000354901 DEFB131AP59861 70 aa6.82□□□□□ -1.32
SMG6-202ENST00000354901 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
SMG6-202ENST00000354901 M0QY20 66 aa6.82□□□□□ -1.32
SMG6-202ENST00000354901 Q9UF83 564 aa6.82□□□□□ -1.32
SMG6-202ENST00000354901 FHL2Q14192 279 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 C11orf44Q8N8P7 122 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 LINC01356Q8N9X3 169 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 C9orf85Q96MD7 179 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 USP24Q9UPU5 2620 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
SMG6-202ENST00000354901 RBMY1CP0DJD4 496 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
SMG6-202ENST00000354901 LITAFQ99732 161 aa6.81□□□□□ -1.32
SMG6-202ENST00000354901 IGHV3-38A0A0C4DH36 116 aa6.8□□□□□ -1.32
SMG6-202ENST00000354901 TRBV27A0A0K0K1C4 114 aa6.8□□□□□ -1.32
SMG6-202ENST00000354901 GHRHP01286 108 aa6.8□□□□□ -1.32
SMG6-202ENST00000354901 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
SMG6-202ENST00000354901 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
SMG6-202ENST00000354901 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
SMG6-202ENST00000354901 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
SMG6-202ENST00000354901 SPANXDQ9BXN6 97 aa6.8□□□□□ -1.32
SMG6-202ENST00000354901 C5orf38Q86SI9 138 aa6.8□□□□□ -1.32
SMG6-202ENST00000354901 COX7A2LO14548 114 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 Q9H8V8 135 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 IGHV3OR16-12A0A075B7B8 117 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 SLPIP03973 132 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 KRTAP10-9P60411 292 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 DEFB121Q5J5C9 76 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
SMG6-202ENST00000354901 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 LINC00846Q9NV44 126 aa6.79□□□□□ -1.32
SMG6-202ENST00000354901 A0A096LNT2 108 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 NCR3O14931 201 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 TMEM86BQ8N661 226 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 DEFB113Q30KQ7 82 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 FN1P02751 2386 aaKnown RBP6.78□□□□□ -1.32
SMG6-202ENST00000354901 C20orf203Q8NBC4 194 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 ZNF702PQ9H963 129 aa6.78□□□□□ -1.32
SMG6-202ENST00000354901 TRBV6-5A0A0K0K1A5 114 aa6.77□□□□□ -1.33
SMG6-202ENST00000354901 DGAT2L7PQ6IED9 249 aa6.77□□□□□ -1.33
SMG6-202ENST00000354901 SNURFQ9Y675 71 aa6.77□□□□□ -1.33
SMG6-202ENST00000354901 NIPBLQ6KC79 2804 aaeCLIP6.77□□□□□ -1.33
SMG6-202ENST00000354901 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
SMG6-202ENST00000354901 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
SMG6-202ENST00000354901 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
SMG6-202ENST00000354901 CXCL5P42830 114 aa6.77□□□□□ -1.33
SMG6-202ENST00000354901 FLNAP21333 2647 aaKnown RBP6.76□□□□□ -1.33
SMG6-202ENST00000354901 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
SMG6-202ENST00000354901 CDKN2A-AS1Q9UH64 79 aa6.76□□□□□ -1.33
SMG6-202ENST00000354901 Q6ZSN1 163 aa6.76□□□□□ -1.33
SMG6-202ENST00000354901 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
SMG6-202ENST00000354901 DYNLRB2Q8TF09 96 aa6.76□□□□□ -1.33
SMG6-202ENST00000354901 VSIG2Q96IQ7 327 aa6.76□□□□□ -1.33
SMG6-202ENST00000354901 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
SMG6-202ENST00000354901 IGKV3OR2-268A0A0C4DH90 116 aa6.75□□□□□ -1.33
SMG6-202ENST00000354901 FAM19A1Q7Z5A9 133 aa6.75□□□□□ -1.33
SMG6-202ENST00000354901 ITPR3Q14573 2671 aa6.75□□□□□ -1.33
SMG6-202ENST00000354901 NDUFC2O95298 119 aa6.75□□□□□ -1.33
SMG6-202ENST00000354901 XCL2Q9UBD3 114 aa6.75□□□□□ -1.33
SMG6-202ENST00000354901 J3QKU1 62 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 ENHOQ6UWT2 76 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 TOMM7Q9P0U1 55 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 IGHV4-31P0DP07 118 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 Q6YL49 198 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 TMEM89A2RUT3 159 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 FSHBP01225 129 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 UPK3BQ9BT76 320 aa6.74□□□□□ -1.33
SMG6-202ENST00000354901 PLA2G2AP14555 144 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 SOSTDC1Q6X4U4 206 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 A0A087WYN8 130 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 LECT2O14960 151 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 CR1P17927 2039 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 RPL28P46779 137 aaKnown RBP6.73□□□□□ -1.33
SMG6-202ENST00000354901 Q96MF0 132 aa6.73□□□□□ -1.33
SMG6-202ENST00000354901 APCP25054 2843 aa6.72□□□□□ -1.33
SMG6-202ENST00000354901 CRPP02741 224 aa6.72□□□□□ -1.33
SMG6-202ENST00000354901 MAP6D1Q9H9H5 199 aa6.71□□□□□ -1.33
SMG6-202ENST00000354901 SS18Q15532 418 aa6.71□□□□□ -1.34
SMG6-202ENST00000354901 LINC01600Q96MT4 127 aa6.71□□□□□ -1.34
SMG6-202ENST00000354901 LINC00467Q9BRT7 94 aa6.71□□□□□ -1.34
SMG6-202ENST00000354901 TIMM17BO60830 172 aa6.71□□□□□ -1.34
SMG6-202ENST00000354901 C11orf68Q9H3H3 251 aaKnown RBP6.71□□□□□ -1.34
SMG6-202ENST00000354901 ZNF469Q96JG9 3925 aaPredicted RBP6.7□□□□□ -1.34
SMG6-202ENST00000354901 HIVEP2P31629 2446 aa6.7□□□□□ -1.34
SMG6-202ENST00000354901 XCL1P47992 114 aa6.7□□□□□ -1.34
SMG6-202ENST00000354901 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
SMG6-202ENST00000354901 TRGV1A0A0A0MS02 117 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms