RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 C2orf83Q53S99 150 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 DPH3Q96FX2 82 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 NOP10Q9NPE3 64 aaKnown RBP7.69□□□□□ -1.18
RTN3-204ENST00000354497 IGKV2D-26A0A0A0MRZ7 120 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 PSMB2P49721 201 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 Q5XG85 94 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 Q6ZQT7 251 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 Q6ZRN7 208 aaPredicted RBP7.69□□□□□ -1.18
RTN3-204ENST00000354497 MIR17HGQ75NE6 70 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 AMN1Q8IY45 258 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 PLEKHB2Q96CS7 222 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 C16orf74Q96GX8 76 aa7.69□□□□□ -1.18
RTN3-204ENST00000354497 SLC25A39Q9BZJ4 359 aaPredicted RBP7.69□□□□□ -1.18
RTN3-204ENST00000354497 TIMM8BQ9Y5J9 83 aaPredicted RBP7.69□□□□□ -1.18
RTN3-204ENST00000354497 PLNP26678 52 aa7.68□□□□□ -1.18
RTN3-204ENST00000354497 FCER1GP30273 86 aa7.68□□□□□ -1.18
RTN3-204ENST00000354497 IGFL4Q6B9Z1 124 aa7.68□□□□□ -1.18
RTN3-204ENST00000354497 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
RTN3-204ENST00000354497 V9GYY9 64 aa7.68□□□□□ -1.18
RTN3-204ENST00000354497 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
RTN3-204ENST00000354497 H3BT86 120 aa7.67□□□□□ -1.18
RTN3-204ENST00000354497 TCL1BO95988 128 aa7.67□□□□□ -1.18
RTN3-204ENST00000354497 ORMDL3Q8N138 153 aa7.67□□□□□ -1.18
RTN3-204ENST00000354497 FAM167A-AS1Q96KT0 104 aa7.67□□□□□ -1.18
RTN3-204ENST00000354497 EPDR1Q9UM22 224 aa7.67□□□□□ -1.18
RTN3-204ENST00000354497 TRAV12-1A0A0B4J245 112 aa7.66□□□□□ -1.18
RTN3-204ENST00000354497 A8MTW9 85 aa7.66□□□□□ -1.18
RTN3-204ENST00000354497 HIST1H4AP62805 103 aaKnown RBP7.66□□□□□ -1.18
RTN3-204ENST00000354497 GNG5P63218 68 aa7.66□□□□□ -1.18
RTN3-204ENST00000354497 RNF182Q8N6D2 247 aa7.66□□□□□ -1.18
RTN3-204ENST00000354497 NXT2Q9NPJ8 142 aaKnown RBP7.66□□□□□ -1.18
RTN3-204ENST00000354497 A0A087WTM6 91 aa7.65□□□□□ -1.18
RTN3-204ENST00000354497 TRBV10-2A0A0K0K1G8 114 aa7.65□□□□□ -1.18
RTN3-204ENST00000354497 ATOX1O00244 68 aa7.65□□□□□ -1.18
RTN3-204ENST00000354497 TRACP01848 142 aa7.65□□□□□ -1.18
RTN3-204ENST00000354497 PRB4P10163 310 aaPredicted RBP7.65□□□□□ -1.18
RTN3-204ENST00000354497 UBE2L3P68036 154 aaKnown RBP7.65□□□□□ -1.18
RTN3-204ENST00000354497 SERTAD4-AS1Q5TG53 156 aa7.65□□□□□ -1.18
RTN3-204ENST00000354497 PGLYRP4Q96LB8 373 aa7.65□□□□□ -1.18
RTN3-204ENST00000354497 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 IFI27P40305 119 aaPredicted RBP7.64□□□□□ -1.19
RTN3-204ENST00000354497 ZNF138P52744 262 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 C6orf226Q5I0X4 101 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 ZC2HC1BQ5TFG8 222 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 FAM104BQ5XKR9 115 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 C5orf38Q86SI9 138 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 LINC00643Q86TS7 51 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 C2orf48Q96LS8 159 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 CHCHD5Q9BSY4 110 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 AAMDCQ9H7C9 122 aa7.64□□□□□ -1.19
RTN3-204ENST00000354497 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
RTN3-204ENST00000354497 NXPH4O95158 308 aa7.63□□□□□ -1.19
RTN3-204ENST00000354497 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
RTN3-204ENST00000354497 JPT2Q9H910 190 aa7.63□□□□□ -1.19
RTN3-204ENST00000354497 IGKV1D-37A0A075B6S9 117 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 IGLV5-52A0A0A0MRZ9 124 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 TRAV8-1A0A0A6YYK1 113 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 LOC107984156A0A0G2JMH3 177 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 RBAKDNA6NC62 111 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 ATXN8Q156A1 80 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 ARL17AQ8IVW1 177 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 UBE2WQ96B02 151 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 PLA2G2DQ9UNK4 145 aa7.62□□□□□ -1.19
RTN3-204ENST00000354497 A0A096LPF7 62 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 H3BNG1 76 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 PLA2G1BP04054 148 aaKnown RBP7.61□□□□□ -1.19
RTN3-204ENST00000354497 ZNF415Q09FC8 603 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 FAM236AA0A1B0GUQ0 79 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 FAM236BA0A1B0GV22 79 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 C9orf85Q96MD7 179 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 PAXXQ9BUH6 204 aa7.61□□□□□ -1.19
RTN3-204ENST00000354497 TRGV11A0A075B6L2 103 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 A0A0B4J2C4 111 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 LINC01620Q4KN68 170 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 GOLT1AQ6ZVE7 132 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 NTN5Q8WTR8 489 aaPredicted RBP7.6□□□□□ -1.19
RTN3-204ENST00000354497 FXYD5Q96DB9 178 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 VSIG2Q96IQ7 327 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 PRO1854Q9UHT4 67 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 PYGO1Q9Y3Y4 419 aa7.6□□□□□ -1.19
RTN3-204ENST00000354497 TRGV2A0A075B6R0 118 aa7.59□□□□□ -1.19
RTN3-204ENST00000354497 K7EMI3 77 aa7.59□□□□□ -1.19
RTN3-204ENST00000354497 LINC00612Q8N6U2 182 aa7.59□□□□□ -1.19
RTN3-204ENST00000354497 Q8N8P6 123 aa7.59□□□□□ -1.19
RTN3-204ENST00000354497 DNAH8Q96JB1 4490 aa7.59□□□□□ -1.19
RTN3-204ENST00000354497 TRBV30A0A0K0K1B3 111 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 PRSS1P07477 247 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 Q6ZTI0 123 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 DEFB104AQ8WTQ1 72 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 SHANK2-AS3Q9BTD1 123 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 MSRB1Q9NZV6 116 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 ICOSQ9Y6W8 199 aa7.58□□□□□ -1.2
RTN3-204ENST00000354497 PGPA6NDG6 321 aa7.57□□□□□ -1.2
RTN3-204ENST00000354497 D6R8Y8 96 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms