RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 UBE2WQ96B02 151 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 RPL35AP18077 110 aaKnown RBP6.13□□□□□ -1.43
TRIM55-204ENST00000353317 ZNF415Q09FC8 603 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 GAGE2BQ13066 116 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 GAGE2EQ4V326 116 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 C1orf158Q8N1D5 194 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 C11orf72Q8NBR9 251 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 WFDC9Q8NEX5 89 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 GAGE2DQ9UEU5 116 aa6.13□□□□□ -1.43
TRIM55-204ENST00000353317 TRAV8-4A0A0B4J246 113 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 IGHV3-53P01767 116 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 COX6CP09669 75 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 PIK3CD-AS1Q5SR53 167 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 LST1O00453 97 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 COX6A2Q02221 97 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 STHQ8IWL8 128 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 TMEM101Q96IK0 257 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 LINC01587Q99440 93 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 IGLV5-45A0A087WSX0 123 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 OXLD1Q5BKU9 147 aa6.12□□□□□ -1.43
TRIM55-204ENST00000353317 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 H3BT86 120 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 NDUFA1O15239 70 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 TIMM17BO60830 172 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 NDUFV3P56181 108 aaKnown RBP6.11□□□□□ -1.43
TRIM55-204ENST00000353317 IGHV3OR16-12A0A075B7B8 117 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 IFITM1P13164 125 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 TIRAPP58753 221 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 C15orf53Q8NAA6 179 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 CSNK1G2-AS1Q8NCQ2 148 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 DNAJC30Q96LL9 226 aa6.11□□□□□ -1.43
TRIM55-204ENST00000353317 C9orf66Q5T8R8 295 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 C3orf56Q8N813 242 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 ZNF625Q96I27 306 aaPredicted RBP6.1□□□□□ -1.43
TRIM55-204ENST00000353317 FAM110AQ9BQ89 295 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 A0A0U1RRA0 63 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 GAGE5Q13069 117 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 GAGE6Q13070 117 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 LINC00242Q5T6M2 205 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 DGAT2L7PQ6IED9 249 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 Q9H8V8 135 aa6.1□□□□□ -1.43
TRIM55-204ENST00000353317 RS1O15537 224 aa6.09□□□□□ -1.43
TRIM55-204ENST00000353317 LINC00694P0DN24 101 aa6.09□□□□□ -1.43
TRIM55-204ENST00000353317 LINC00308Q8TCZ7 52 aa6.09□□□□□ -1.43
TRIM55-204ENST00000353317 MGAM2Q2M2H8 2515 aa6.09□□□□□ -1.43
TRIM55-204ENST00000353317 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.44
TRIM55-204ENST00000353317 B5MCH6 92 aa6.09□□□□□ -1.44
TRIM55-204ENST00000353317 KRTAP10-11P60412 298 aa6.09□□□□□ -1.44
TRIM55-204ENST00000353317 TTC32Q5I0X7 151 aa6.09□□□□□ -1.44
TRIM55-204ENST00000353317 Q6Q795 121 aa6.09□□□□□ -1.44
TRIM55-204ENST00000353317 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 INSP01308 110 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
TRIM55-204ENST00000353317 DEFB121Q5J5C9 76 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 MDFIQ99750 246 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 WIPF1O43516 503 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 HERVK_113P63121 156 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 SOSTDC1Q6X4U4 206 aa6.08□□□□□ -1.44
TRIM55-204ENST00000353317 PLAC8L1A1L4L8 177 aa6.07□□□□□ -1.44
TRIM55-204ENST00000353317 SMIM1B2RUZ4 78 aa6.07□□□□□ -1.44
TRIM55-204ENST00000353317 TRAV13-1A0A0B4J241 112 aa6.07□□□□□ -1.44
TRIM55-204ENST00000353317 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
TRIM55-204ENST00000353317 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
TRIM55-204ENST00000353317 NTM-AS1Q6ZSK4 140 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 TRGV1A0A0A0MS02 117 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 GAGE12JA6NER3 117 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 COX7A2LO14548 114 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 GAGE7O76087 117 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 GAGE12FP0CL80 117 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 GAGE12GP0CL81 117 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 GAGE12IP0CL82 117 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 CMC4P56277 68 aaPredicted RBP6.06□□□□□ -1.44
TRIM55-204ENST00000353317 GAGE4Q13068 117 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 SHISA2Q6UWI4 295 aa6.06□□□□□ -1.44
TRIM55-204ENST00000353317 FAM19A3Q7Z5A8 133 aa6.05□□□□□ -1.44
TRIM55-204ENST00000353317 IL17DQ8TAD2 202 aa6.05□□□□□ -1.44
TRIM55-204ENST00000353317 MRPL23Q16540 153 aaKnown RBP6.05□□□□□ -1.44
TRIM55-204ENST00000353317 CSDC2Q9Y534 153 aaKnown RBP6.05□□□□□ -1.44
TRIM55-204ENST00000353317 F5H768 121 aa6.04□□□□□ -1.44
TRIM55-204ENST00000353317 Q6ZTI0 123 aa6.04□□□□□ -1.44
TRIM55-204ENST00000353317 CDC42SE2Q9NRR3 84 aa6.04□□□□□ -1.44
TRIM55-204ENST00000353317 RPL36AP83881 106 aaKnown RBP6.04□□□□□ -1.44
TRIM55-204ENST00000353317 MEIG1Q5JSS6 88 aa6.04□□□□□ -1.44
TRIM55-204ENST00000353317 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
TRIM55-204ENST00000353317 K7EQD1 137 aa6.03□□□□□ -1.44
TRIM55-204ENST00000353317 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
TRIM55-204ENST00000353317 DAZ2Q13117 558 aaKnown RBP6.03□□□□□ -1.44
TRIM55-204ENST00000353317 DAZ4Q86SG3 579 aaKnown RBP6.03□□□□□ -1.44
TRIM55-204ENST00000353317 NOP10Q9NPE3 64 aaKnown RBP6.03□□□□□ -1.44
TRIM55-204ENST00000353317 DAZ3Q9NR90 486 aaKnown RBP6.03□□□□□ -1.44
TRIM55-204ENST00000353317 X6R8D5 127 aa6.03□□□□□ -1.44
TRIM55-204ENST00000353317 TRBV10-1A0A0K0K1A3 114 aa6.02□□□□□ -1.45
TRIM55-204ENST00000353317 TRBV7-7A0A0K0K1E9 115 aa6.02□□□□□ -1.45
TRIM55-204ENST00000353317 FAM218AQ96MZ4 157 aa6.02□□□□□ -1.45
TRIM55-204ENST00000353317 PRB2P02812 416 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-204ENST00000353317 EGFEM1PQ0D2K5 195 aa6.02□□□□□ -1.45
TRIM55-204ENST00000353317 DEFB135Q30KP9 77 aa6.02□□□□□ -1.45
TRIM55-204ENST00000353317 COPS9Q8WXC6 57 aa6.02□□□□□ -1.45
TRIM55-204ENST00000353317 CHCHD5Q9BSY4 110 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms