RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.35
AC008543.1-201ENST00000344893 KRTAP1-3Q8IUG1 177 aa6.59□□□□□ -1.35
AC008543.1-201ENST00000344893 Q8N2B8 174 aa6.59□□□□□ -1.35
AC008543.1-201ENST00000344893 FAM223AQ8IWN6 122 aa6.59□□□□□ -1.35
AC008543.1-201ENST00000344893 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.35
AC008543.1-201ENST00000344893 VSIG2Q96IQ7 327 aa6.59□□□□□ -1.35
AC008543.1-201ENST00000344893 NOTCH1P46531 2555 aa6.59□□□□□ -1.36
AC008543.1-201ENST00000344893 Q9HAA7 133 aa6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 A0A0U1RRA0 63 aa6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 FAM223BA6NKX1 122 aa6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 CD28P10747 220 aa6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 FAM218AQ96MZ4 157 aa6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 MRPS36P82909 103 aaKnown RBP6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 Q6JHZ5 121 aa6.58□□□□□ -1.36
AC008543.1-201ENST00000344893 TENM1Q9UKZ4 2725 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 LY6G6DO95868 133 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 FAM222AQ5U5X8 452 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 C9orf139Q6ZV77 190 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 PRIMA1Q86XR5 153 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 LINC00846Q9NV44 126 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 A0A096LNT2 108 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 F6UB75 175 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 NBEAL1Q6ZS30 2694 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
AC008543.1-201ENST00000344893 M0QY20 66 aa6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 HOXD3P31249 432 aaPredicted RBP6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 C18orf65Q6ZTR6 163 aa6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 C9orf85Q96MD7 179 aa6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 MGAM2Q2M2H8 2515 aa6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 CYSRT1A8MQ03 144 aa6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 NDUFC2O95298 119 aa6.56□□□□□ -1.36
AC008543.1-201ENST00000344893 TIMM17BO60830 172 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 EDN2P20800 178 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 TMEM86BQ8N661 226 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 ZNF625Q96I27 306 aaPredicted RBP6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 NBEAL2Q6ZNJ1 2754 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 SEC61GP60059 68 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 CIRBPQ14011 172 aaKnown RBP6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 C9orf129Q5T035 196 aaKnown RBP6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 NDUFC2-KCTD14E9PQ53 114 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 ZNF415Q09FC8 603 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 C20orf197Q8N268 126 aa6.55□□□□□ -1.36
AC008543.1-201ENST00000344893 GHRHP01286 108 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 HILS1P60008 231 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 Q8N6K4 173 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 UBE2D4Q9Y2X8 147 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 TRAV12-2A0A075B6T6 113 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 A6NDX4 124 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 IGKV3-20P01619 116 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 ESM1Q9NQ30 184 aa6.54□□□□□ -1.36
AC008543.1-201ENST00000344893 U3KQE9 123 aa6.53□□□□□ -1.36
AC008543.1-201ENST00000344893 VWFP04275 2813 aa6.53□□□□□ -1.36
AC008543.1-201ENST00000344893 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
AC008543.1-201ENST00000344893 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
AC008543.1-201ENST00000344893 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 RBMY1BA6NDE4 496 aaKnown RBP6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 RBMY1EA6NEQ0 496 aaKnown RBP6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 RBMY1DP0C7P1 496 aaKnown RBP6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 RBMY1A1P0DJD3 496 aaKnown RBP6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 RBMY1CP0DJD4 496 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 RBMY1FQ15415 496 aaKnown RBP6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 UNQ9165/PRO28630Q6UXU0 137 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 NDUFA1O15239 70 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 IGHG2P01859 326 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 PSMB8P28062 276 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 APRG1Q8IVJ8 170 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 FAM110DQ8TAY7 271 aaPredicted RBP6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 Q9H8V8 135 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 V9GYY9 64 aa6.52□□□□□ -1.37
AC008543.1-201ENST00000344893 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 WFDC9Q8NEX5 89 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 CDKN2A-AS1Q9UH64 79 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 A0A0U1RQV1 116 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 EPM2AB3EWF7 344 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 XCL1P47992 114 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 XCL2Q9UBD3 114 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 Q6YL49 198 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 C16orf95Q9H693 158 aa6.51□□□□□ -1.37
AC008543.1-201ENST00000344893 SLURP1P55000 103 aa6.5□□□□□ -1.37
AC008543.1-201ENST00000344893 SOCS3O14543 225 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 HTN1P15515 57 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 FP248Q71RG6 208 aaPredicted RBP6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 NCR3O14931 201 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 C1orf195Q5TG92 126 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 A0A087WYN8 130 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 KLLNB2CW77 178 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 H7BZZ5 65 aa6.49□□□□□ -1.37
AC008543.1-201ENST00000344893 KRTAP1-1Q07627 177 aa6.48□□□□□ -1.37
AC008543.1-201ENST00000344893 PIK3CD-AS1Q5SR53 167 aa6.48□□□□□ -1.37
AC008543.1-201ENST00000344893 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms