RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 WFDC10AQ9H1F0 79 aa16.32■□□□□ 0.2
NKX2-3-201ENST00000344586 PTPN13Q12923 2485 aa16.31■□□□□ 0.2
NKX2-3-201ENST00000344586 UBR5O95071 2799 aaPredicted RBP16.31■□□□□ 0.2
NKX2-3-201ENST00000344586 TRGV2A0A075B6R0 118 aa16.31■□□□□ 0.2
NKX2-3-201ENST00000344586 ESM1Q9NQ30 184 aa16.31■□□□□ 0.2
NKX2-3-201ENST00000344586 NAV2Q8IVL1 2488 aa16.3■□□□□ 0.2
NKX2-3-201ENST00000344586 B5MCH6 92 aa16.3■□□□□ 0.2
NKX2-3-201ENST00000344586 CCDC179H3BU77 68 aa16.3■□□□□ 0.2
NKX2-3-201ENST00000344586 COX7B2Q8TF08 81 aa16.3■□□□□ 0.2
NKX2-3-201ENST00000344586 TRBV7-7A0A0K0K1E9 115 aa16.3■□□□□ 0.2
NKX2-3-201ENST00000344586 TRBV6-4A0A1B0GX49 114 aa16.3■□□□□ 0.2
NKX2-3-201ENST00000344586 C22orf24Q9Y442 160 aa16.3■□□□□ 0.2
NKX2-3-201ENST00000344586 SS18L2Q9UHA2 77 aa16.29■□□□□ 0.2
NKX2-3-201ENST00000344586 ZNF462Q96JM2 2506 aa16.28■□□□□ 0.2
NKX2-3-201ENST00000344586 LRRK2Q5S007 2527 aa16.28■□□□□ 0.2
NKX2-3-201ENST00000344586 ACYP1P07311 99 aa16.28■□□□□ 0.2
NKX2-3-201ENST00000344586 RPL35AP18077 110 aaKnown RBP16.27■□□□□ 0.2
NKX2-3-201ENST00000344586 FAM222AQ5U5X8 452 aa16.27■□□□□ 0.2
NKX2-3-201ENST00000344586 HIST2H2BCQ6DN03 193 aa16.27■□□□□ 0.2
NKX2-3-201ENST00000344586 MIR7-3HGQ8N6C7 128 aa16.27■□□□□ 0.2
NKX2-3-201ENST00000344586 BAALC-AS2P0C853 105 aa16.26■□□□□ 0.19
NKX2-3-201ENST00000344586 TRAV13-2A0A0B4J235 113 aa16.26■□□□□ 0.19
NKX2-3-201ENST00000344586 LINC00337Q8N6G1 96 aa16.26■□□□□ 0.19
NKX2-3-201ENST00000344586 OVOL2Q9BRP0 275 aa16.26■□□□□ 0.19
NKX2-3-201ENST00000344586 ABCA12Q86UK0 2595 aa16.26■□□□□ 0.19
NKX2-3-201ENST00000344586 IGLV4-60A0A075B6I1 120 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 IGKV2-28A0A075B6P5 120 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 IGKV2D-28P01615 120 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 CRPP02741 224 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 PF4P02776 101 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 RPL28P46779 137 aaKnown RBP16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 C19orf73Q9NVV2 129 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 PLA2G2AP14555 144 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 CMC4P56277 68 aaPredicted RBP16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 CSNK1G2-AS1Q8NCQ2 148 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 SMCR5Q8TEV8 140 aa16.25■□□□□ 0.19
NKX2-3-201ENST00000344586 TRGV4A0A0C4DH28 118 aa16.24■□□□□ 0.19
NKX2-3-201ENST00000344586 IGKV3OR2-268A0A0C4DH90 116 aa16.24■□□□□ 0.19
NKX2-3-201ENST00000344586 TOMM7Q9P0U1 55 aa16.24■□□□□ 0.19
NKX2-3-201ENST00000344586 EPG5Q9HCE0 2579 aa16.23■□□□□ 0.19
NKX2-3-201ENST00000344586 SND1-IT1Q9HBX3 110 aa16.23■□□□□ 0.19
NKX2-3-201ENST00000344586 ZNF843Q8N446 348 aa16.23■□□□□ 0.19
NKX2-3-201ENST00000344586 CUBNO60494 3623 aa16.22■□□□□ 0.19
NKX2-3-201ENST00000344586 TRBV6-8A0A0A6YYG3 113 aa16.22■□□□□ 0.19
NKX2-3-201ENST00000344586 IGHV3OR16-9A0A0B4J2B5 98 aa16.22■□□□□ 0.19
NKX2-3-201ENST00000344586 WFDC11Q8NEX6 87 aa16.22■□□□□ 0.19
NKX2-3-201ENST00000344586 FHL2Q14192 279 aa16.21■□□□□ 0.19
NKX2-3-201ENST00000344586 Q9HAA7 133 aa16.21■□□□□ 0.19
NKX2-3-201ENST00000344586 IGLV1-51P01701 117 aa16.2■□□□□ 0.18
NKX2-3-201ENST00000344586 FAM110AQ9BQ89 295 aa16.2■□□□□ 0.18
NKX2-3-201ENST00000344586 WNK1Q9H4A3 2382 aa16.2■□□□□ 0.18
NKX2-3-201ENST00000344586 SETXQ7Z333 2677 aaKnown RBP16.19■□□□□ 0.18
NKX2-3-201ENST00000344586 LINC00158P58513 81 aa16.18■□□□□ 0.18
NKX2-3-201ENST00000344586 SDIM1Q6ZPB5 146 aa16.18■□□□□ 0.18
NKX2-3-201ENST00000344586 LINC01006Q8NI28 216 aa16.18■□□□□ 0.18
NKX2-3-201ENST00000344586 CHCHD5Q9BSY4 110 aa16.18■□□□□ 0.18
NKX2-3-201ENST00000344586 ZFYVE26Q68DK2 2539 aa16.18■□□□□ 0.18
NKX2-3-201ENST00000344586 CCL18P55774 89 aa16.17■□□□□ 0.18
NKX2-3-201ENST00000344586 SMIM11BQ8TCY0 68 aa16.17■□□□□ 0.18
NKX2-3-201ENST00000344586 NBPF19A0A087WUL8 3843 aa16.17■□□□□ 0.18
NKX2-3-201ENST00000344586 A0A087WZ39 114 aa16.17■□□□□ 0.18
NKX2-3-201ENST00000344586 MALP21145 153 aa16.17■□□□□ 0.18
NKX2-3-201ENST00000344586 IMUPQ9GZP8 106 aa16.17■□□□□ 0.18
NKX2-3-201ENST00000344586 LINC00643Q86TS7 51 aa16.16■□□□□ 0.18
NKX2-3-201ENST00000344586 IBA57-AS1B1ANH7 110 aa16.15■□□□□ 0.18
NKX2-3-201ENST00000344586 NOTCH3Q9UM47 2321 aa16.15■□□□□ 0.18
NKX2-3-201ENST00000344586 A0A087WYN8 130 aa16.15■□□□□ 0.18
NKX2-3-201ENST00000344586 TLN2Q9Y4G6 2542 aa16.15■□□□□ 0.18
NKX2-3-201ENST00000344586 ITPR3Q14573 2671 aa16.15■□□□□ 0.18
NKX2-3-201ENST00000344586 INAFM2P0DMQ5 153 aa16.14■□□□□ 0.17
NKX2-3-201ENST00000344586 APCP25054 2843 aa16.14■□□□□ 0.17
NKX2-3-201ENST00000344586 C5orf38Q86SI9 138 aa16.14■□□□□ 0.17
NKX2-3-201ENST00000344586 C16orf95Q9H693 158 aa16.14■□□□□ 0.17
NKX2-3-201ENST00000344586 NIPBLQ6KC79 2804 aaeCLIP16.13■□□□□ 0.17
NKX2-3-201ENST00000344586 NF1P21359 2839 aa16.12■□□□□ 0.17
NKX2-3-201ENST00000344586 FAM236AA0A1B0GUQ0 79 aa16.12■□□□□ 0.17
NKX2-3-201ENST00000344586 FAM236BA0A1B0GV22 79 aa16.12■□□□□ 0.17
NKX2-3-201ENST00000344586 SONP18583 2426 aaKnown RBP16.12■□□□□ 0.17
NKX2-3-201ENST00000344586 LINC00959A0A1B0GUT2 108 aa16.11■□□□□ 0.17
NKX2-3-201ENST00000344586 PFN2P35080 140 aa16.11■□□□□ 0.17
NKX2-3-201ENST00000344586 C2CD3Q4AC94 2353 aa16.11■□□□□ 0.17
NKX2-3-201ENST00000344586 RNASE1P07998 156 aaKnown RBP16.1■□□□□ 0.17
NKX2-3-201ENST00000344586 GAGE2AQ6NT46 116 aa16.1■□□□□ 0.17
NKX2-3-201ENST00000344586 DNAL4O96015 105 aa16.09■□□□□ 0.17
NKX2-3-201ENST00000344586 JMJD1CQ15652 2540 aa16.08■□□□□ 0.16
NKX2-3-201ENST00000344586 C9orf129Q5T035 196 aaKnown RBP16.08■□□□□ 0.16
NKX2-3-201ENST00000344586 KRTAP1-1Q07627 177 aa16.07■□□□□ 0.16
NKX2-3-201ENST00000344586 H0YGX0 51 aa16.07■□□□□ 0.16
NKX2-3-201ENST00000344586 DEFB130BP0DP73 79 aa16.07■□□□□ 0.16
NKX2-3-201ENST00000344586 DEFB130AP0DP74 79 aa16.07■□□□□ 0.16
NKX2-3-201ENST00000344586 C11orf68Q9H3H3 251 aaKnown RBP16.06■□□□□ 0.16
NKX2-3-201ENST00000344586 PAX4O43316 350 aa16.06■□□□□ 0.16
NKX2-3-201ENST00000344586 ATP5G1P05496 136 aa16.04■□□□□ 0.16
NKX2-3-201ENST00000344586 LINC00612Q8N6U2 182 aa16.04■□□□□ 0.16
NKX2-3-201ENST00000344586 KIR2DL5BQ8NHK3 375 aa16.04■□□□□ 0.16
NKX2-3-201ENST00000344586 KMT2BQ9UMN6 2715 aaPredicted RBP16.04■□□□□ 0.16
NKX2-3-201ENST00000344586 LY6G6DO95868 133 aa16.03■□□□□ 0.16
NKX2-3-201ENST00000344586 GYPEP15421 78 aa16.03■□□□□ 0.16
NKX2-3-201ENST00000344586 XCL1P47992 114 aa16.03■□□□□ 0.16
NKX2-3-201ENST00000344586 C6orf226Q5I0X4 101 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms