RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MRAPQ8TCY5 172 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 LYRM9A8MSI8 78 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 CDC42SE2Q9NRR3 84 aa5.22□□□□□ -1.57
VCAN-202ENST00000342785 ATRQ13535 2644 aa5.21□□□□□ -1.57
VCAN-202ENST00000342785 MGAQ8IWI9 3026 aa5.21□□□□□ -1.57
VCAN-202ENST00000342785 ATOX1O00244 68 aa5.21□□□□□ -1.57
VCAN-202ENST00000342785 LINC00315P59091 139 aa5.21□□□□□ -1.57
VCAN-202ENST00000342785 BBC3Q96PG8 261 aaPredicted RBP5.21□□□□□ -1.57
VCAN-202ENST00000342785 NDUFV3P56181 108 aaKnown RBP5.21□□□□□ -1.58
VCAN-202ENST00000342785 C1orf158Q8N1D5 194 aa5.21□□□□□ -1.58
VCAN-202ENST00000342785 DEFB105AQ8NG35 78 aa5.21□□□□□ -1.58
VCAN-202ENST00000342785 RBMY1FQ15415 496 aaKnown RBP5.21□□□□□ -1.58
VCAN-202ENST00000342785 MAP1AP78559 2803 aaPredicted RBP5.21□□□□□ -1.58
VCAN-202ENST00000342785 RBM3P98179 157 aaKnown RBP5.2□□□□□ -1.58
VCAN-202ENST00000342785 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 AMELXQ99217 191 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 SLPIP03973 132 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 TMEM256-PLSCR3K7ERE1 68 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 DIRC1Q969H9 104 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 ETDCA0A1B0GVM5 59 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 HILS1P60008 231 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 SMIM1B2RUZ4 78 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 ADAMTSL4-AS1Q5T5F5 129 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 MUC4Q99102 2169 aa5.2□□□□□ -1.58
VCAN-202ENST00000342785 INAFM1C9JVW0 142 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 LINC00694P0DN24 101 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 CCL18P55774 89 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 Q6ZSN1 163 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 XAGE1AQ9HD64 81 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 MAST4O15021 2626 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 LINC00959A0A1B0GUT2 108 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 C6orf99Q4VX62 202 aa5.19□□□□□ -1.58
VCAN-202ENST00000342785 BEAN1Q3B7T3 259 aa5.18□□□□□ -1.58
VCAN-202ENST00000342785 RAI1Q7Z5J4 1906 aaPredicted RBP5.18□□□□□ -1.58
VCAN-202ENST00000342785 LINC01546A6NGU7 62 aa5.18□□□□□ -1.58
VCAN-202ENST00000342785 UBE2BP63146 152 aa5.18□□□□□ -1.58
VCAN-202ENST00000342785 FUSP35637 526 aaKnown RBP eCLIP5.18□□□□□ -1.58
VCAN-202ENST00000342785 LINC00526Q96FQ7 95 aa5.18□□□□□ -1.58
VCAN-202ENST00000342785 IGLV1-51P01701 117 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 CD164L2Q6UWJ8 174 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 hADV29S1A0JD25 119 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 MIFP14174 115 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 NREPQ16612 68 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 IGHV4-28A0A0C4DH34 117 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 COX7BP24311 80 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 COX6A2Q02221 97 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 SDIM1Q6ZPB5 146 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 FAM19A4Q96LR4 140 aa5.17□□□□□ -1.58
VCAN-202ENST00000342785 PDE6GP18545 87 aa5.16□□□□□ -1.58
VCAN-202ENST00000342785 SMIM11BQ8TCY0 68 aa5.16□□□□□ -1.58
VCAN-202ENST00000342785 FLNAP21333 2647 aaKnown RBP5.16□□□□□ -1.58
VCAN-202ENST00000342785 CSDC2Q9Y534 153 aaKnown RBP5.16□□□□□ -1.58
VCAN-202ENST00000342785 IGLV4-60A0A075B6I1 120 aa5.16□□□□□ -1.58
VCAN-202ENST00000342785 LY6G6DO95868 133 aa5.15□□□□□ -1.58
VCAN-202ENST00000342785 KLK9Q2XQG4 91 aa5.15□□□□□ -1.58
VCAN-202ENST00000342785 H3BQ85 93 aa5.15□□□□□ -1.59
VCAN-202ENST00000342785 C11orf45Q8TAV5 145 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 Q9UF83 564 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 FAM110AQ9BQ89 295 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 TRAV23DV6A0A075B6W5 121 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 C11orf72Q8NBR9 251 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 KIR2DL5BQ8NHK3 375 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 SMR3AQ99954 134 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 Q6ZQY7 126 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 XIRP2A4UGR9 3374 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 A0A087WZ39 114 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 CDK2AP2O75956 126 aa5.14□□□□□ -1.59
VCAN-202ENST00000342785 Q8IZM0 81 aa5.13□□□□□ -1.59
VCAN-202ENST00000342785 DEFB131BA0A096LNP1 70 aa5.13□□□□□ -1.59
VCAN-202ENST00000342785 UQCRQO14949 82 aa5.13□□□□□ -1.59
VCAN-202ENST00000342785 FHL2Q14192 279 aa5.13□□□□□ -1.59
VCAN-202ENST00000342785 VPS13AQ96RL7 3174 aa5.13□□□□□ -1.59
VCAN-202ENST00000342785 LELP1Q5T871 98 aa5.13□□□□□ -1.59
VCAN-202ENST00000342785 IMUPQ9GZP8 106 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 PTPRBP23467 1997 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 FAM240AA0A1B0GVK7 77 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 PLA2G2AP14555 144 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 ITPR3Q14573 2671 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 RPL28P46779 137 aaKnown RBP5.12□□□□□ -1.59
VCAN-202ENST00000342785 C20orf197Q8N268 126 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 CFAP46Q8IYW2 2715 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 UNQ6190/PRO20217Q6UXQ8 127 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 DSPP15924 2871 aaKnown RBP5.12□□□□□ -1.59
VCAN-202ENST00000342785 SYCNQ0VAF6 134 aa5.12□□□□□ -1.59
VCAN-202ENST00000342785 SMCPP49901 116 aaPredicted RBP5.11□□□□□ -1.59
VCAN-202ENST00000342785 KPRPQ5T749 579 aaPredicted RBP5.11□□□□□ -1.59
VCAN-202ENST00000342785 CLUHP3Q96NS8 147 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 CYSRT1A8MQ03 144 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 UPK3BQ9BT76 320 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 ENHOQ6UWT2 76 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 AKAP13Q12802 2813 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 PRO0461Q9UI25 63 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 USP17L23D6RBM5 183 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 J3KT08 172 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 Q8N2B8 174 aa5.11□□□□□ -1.59
VCAN-202ENST00000342785 IGLV5-39A0A0G2JS06 123 aa5.1□□□□□ -1.59
VCAN-202ENST00000342785 C9orf116Q5BN46 136 aaPredicted RBP5.1□□□□□ -1.59
VCAN-202ENST00000342785 NTM-AS1Q6ZSK4 140 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms