RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 UBE2D3P61077 147 aa9.07□□□□□ -0.96
LMX1A-202ENST00000342310 UBE2D2P62837 147 aa9.07□□□□□ -0.96
LMX1A-202ENST00000342310 MRPL23Q16540 153 aaKnown RBP9.07□□□□□ -0.96
LMX1A-202ENST00000342310 J3QLI3 93 aa9.06□□□□□ -0.96
LMX1A-202ENST00000342310 ATP5G1P05496 136 aa9.06□□□□□ -0.96
LMX1A-202ENST00000342310 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
LMX1A-202ENST00000342310 C6orf226Q5I0X4 101 aa9.06□□□□□ -0.96
LMX1A-202ENST00000342310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
LMX1A-202ENST00000342310 DNAL4O96015 105 aa9.06□□□□□ -0.96
LMX1A-202ENST00000342310 TMEM89A2RUT3 159 aa9.06□□□□□ -0.96
LMX1A-202ENST00000342310 LINC00482Q8N8I6 264 aa9.06□□□□□ -0.96
LMX1A-202ENST00000342310 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
LMX1A-202ENST00000342310 COL6A5A8TX70 2615 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 FAM236AA0A1B0GUQ0 79 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 FAM236BA0A1B0GV22 79 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 TINCRA0A1B0GVN0 87 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 TMEM243Q9BU79 118 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 CHCHD7Q9BUK0 85 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 ZNF843Q8N446 348 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
LMX1A-202ENST00000342310 C1orf158Q8N1D5 194 aa9.04□□□□□ -0.96
LMX1A-202ENST00000342310 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
LMX1A-202ENST00000342310 K7EQD1 137 aa9.04□□□□□ -0.96
LMX1A-202ENST00000342310 SPANXA1Q9NS26 97 aa9.04□□□□□ -0.96
LMX1A-202ENST00000342310 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
LMX1A-202ENST00000342310 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
LMX1A-202ENST00000342310 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.96
LMX1A-202ENST00000342310 MIAQ16674 131 aa9.02□□□□□ -0.96
LMX1A-202ENST00000342310 AMELXQ99217 191 aa9.02□□□□□ -0.96
LMX1A-202ENST00000342310 IGKV3D-7A0A0C4DH55 119 aa9.02□□□□□ -0.97
LMX1A-202ENST00000342310 CRPP02741 224 aa9.02□□□□□ -0.97
LMX1A-202ENST00000342310 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
LMX1A-202ENST00000342310 ATP6V0E2Q8NHE4 81 aa9.02□□□□□ -0.97
LMX1A-202ENST00000342310 HERVK_113P63121 156 aa9.02□□□□□ -0.97
LMX1A-202ENST00000342310 SLPIP03973 132 aa9.01□□□□□ -0.97
LMX1A-202ENST00000342310 MRPS36P82909 103 aaKnown RBP9.01□□□□□ -0.97
LMX1A-202ENST00000342310 H7C423 109 aa9.01□□□□□ -0.97
LMX1A-202ENST00000342310 HIST1H4AP62805 103 aaKnown RBP9.01□□□□□ -0.97
LMX1A-202ENST00000342310 Q8N2B8 174 aa9.01□□□□□ -0.97
LMX1A-202ENST00000342310 BAALC-AS2P0C853 105 aa9□□□□□ -0.97
LMX1A-202ENST00000342310 GYPEP15421 78 aa9□□□□□ -0.97
LMX1A-202ENST00000342310 DEFB135Q30KP9 77 aa9□□□□□ -0.97
LMX1A-202ENST00000342310 C9orf153Q5TBE3 101 aa9□□□□□ -0.97
LMX1A-202ENST00000342310 LINC00308Q8TCZ7 52 aa9□□□□□ -0.97
LMX1A-202ENST00000342310 ODF3Q96PU9 254 aa9□□□□□ -0.97
LMX1A-202ENST00000342310 ZNF469Q96JG9 3925 aaPredicted RBP9□□□□□ -0.97
LMX1A-202ENST00000342310 BAHCC1Q9P281 2608 aa9□□□□□ -0.97
LMX1A-202ENST00000342310 LINC01006Q8NI28 216 aa8.99□□□□□ -0.97
LMX1A-202ENST00000342310 IGLV4-60A0A075B6I1 120 aa8.99□□□□□ -0.97
LMX1A-202ENST00000342310 NTM-AS1Q6ZSK4 140 aa8.99□□□□□ -0.97
LMX1A-202ENST00000342310 TENM1Q9UKZ4 2725 aa8.99□□□□□ -0.97
LMX1A-202ENST00000342310 SND1-IT1Q9HBX3 110 aa8.98□□□□□ -0.97
LMX1A-202ENST00000342310 A0A0B4J2C4 111 aa8.98□□□□□ -0.97
LMX1A-202ENST00000342310 RPL32P62910 135 aaKnown RBP8.98□□□□□ -0.97
LMX1A-202ENST00000342310 PRR3P79522 188 aaKnown RBP8.98□□□□□ -0.97
LMX1A-202ENST00000342310 C11orf72Q8NBR9 251 aa8.98□□□□□ -0.97
LMX1A-202ENST00000342310 TENM4Q6N022 2769 aa8.98□□□□□ -0.97
LMX1A-202ENST00000342310 ANGP03950 147 aaKnown RBP8.97□□□□□ -0.97
LMX1A-202ENST00000342310 MALP21145 153 aa8.97□□□□□ -0.97
LMX1A-202ENST00000342310 KLK9Q2XQG4 91 aa8.97□□□□□ -0.97
LMX1A-202ENST00000342310 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
LMX1A-202ENST00000342310 F5H768 121 aa8.96□□□□□ -0.97
LMX1A-202ENST00000342310 CR1P17927 2039 aa8.96□□□□□ -0.97
LMX1A-202ENST00000342310 NSD1Q96L73 2696 aaPredicted RBP8.96□□□□□ -0.97
LMX1A-202ENST00000342310 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
LMX1A-202ENST00000342310 DAZ4Q86SG3 579 aaKnown RBP8.96□□□□□ -0.98
LMX1A-202ENST00000342310 DAZ3Q9NR90 486 aaKnown RBP8.96□□□□□ -0.98
LMX1A-202ENST00000342310 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.98
LMX1A-202ENST00000342310 FBN1P35555 2871 aaKnown RBP8.95□□□□□ -0.98
LMX1A-202ENST00000342310 SMIM1B2RUZ4 78 aa8.95□□□□□ -0.98
LMX1A-202ENST00000342310 SDIM1Q6ZPB5 146 aa8.95□□□□□ -0.98
LMX1A-202ENST00000342310 C14orf132Q9NPU4 83 aa8.95□□□□□ -0.98
LMX1A-202ENST00000342310 Q8N3U1 123 aa8.94□□□□□ -0.98
LMX1A-202ENST00000342310 SOSTDC1Q6X4U4 206 aa8.94□□□□□ -0.98
LMX1A-202ENST00000342310 LECT2O14960 151 aa8.94□□□□□ -0.98
LMX1A-202ENST00000342310 COX7B2Q8TF08 81 aa8.94□□□□□ -0.98
LMX1A-202ENST00000342310 BRI3O95415 125 aa8.93□□□□□ -0.98
LMX1A-202ENST00000342310 C9orf116Q5BN46 136 aaPredicted RBP8.93□□□□□ -0.98
LMX1A-202ENST00000342310 CDC42SE2Q9NRR3 84 aa8.93□□□□□ -0.98
LMX1A-202ENST00000342310 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
LMX1A-202ENST00000342310 TRBV30A0A0K0K1B3 111 aa8.92□□□□□ -0.98
LMX1A-202ENST00000342310 DNAJC30Q96LL9 226 aa8.92□□□□□ -0.98
LMX1A-202ENST00000342310 LITAFQ99732 161 aa8.92□□□□□ -0.98
LMX1A-202ENST00000342310 A0A096LNT2 108 aa8.92□□□□□ -0.98
LMX1A-202ENST00000342310 FAM104AQ969W3 186 aa8.92□□□□□ -0.98
LMX1A-202ENST00000342310 NDUFA1O15239 70 aa8.91□□□□□ -0.98
LMX1A-202ENST00000342310 LINC00269Q8N2A0 174 aa8.91□□□□□ -0.98
LMX1A-202ENST00000342310 NHLRC4P0CG21 123 aaPredicted RBP8.91□□□□□ -0.98
LMX1A-202ENST00000342310 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
LMX1A-202ENST00000342310 WFDC9Q8NEX5 89 aa8.89□□□□□ -0.99
LMX1A-202ENST00000342310 C16orf74Q96GX8 76 aa8.89□□□□□ -0.99
LMX1A-202ENST00000342310 A0A087WVE0 104 aa8.89□□□□□ -0.99
LMX1A-202ENST00000342310 LST1O00453 97 aa8.89□□□□□ -0.99
LMX1A-202ENST00000342310 S100A7L2Q5SY68 101 aa8.89□□□□□ -0.99
LMX1A-202ENST00000342310 NCR3O14931 201 aa8.88□□□□□ -0.99
LMX1A-202ENST00000342310 SS18Q15532 418 aa8.88□□□□□ -0.99
LMX1A-202ENST00000342310 TRBV6-8A0A0A6YYG3 113 aa8.88□□□□□ -0.99
LMX1A-202ENST00000342310 A8MTW9 85 aa8.88□□□□□ -0.99
LMX1A-202ENST00000342310 DAD1P61803 113 aa8.88□□□□□ -0.99
LMX1A-202ENST00000342310 LOC107984640A0A0U1RRK4 108 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms