RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 NCOA6Q14686 2063 aaPredicted RBP11.09□□□□□ -0.63
COL11A2-201ENST00000341947 LST1O00453 97 aa11.09□□□□□ -0.63
COL11A2-201ENST00000341947 SNURFQ9Y675 71 aa11.08□□□□□ -0.64
COL11A2-201ENST00000341947 SMR3AQ99954 134 aa11.07□□□□□ -0.64
COL11A2-201ENST00000341947 RETNQ9HD89 108 aa11.06□□□□□ -0.64
COL11A2-201ENST00000341947 IGLV5-52A0A0A0MRZ9 124 aa11.06□□□□□ -0.64
COL11A2-201ENST00000341947 SERP2Q8N6R1 65 aa11.06□□□□□ -0.64
COL11A2-201ENST00000341947 FAM30AQ9NZY2 134 aa11.06□□□□□ -0.64
COL11A2-201ENST00000341947 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
COL11A2-201ENST00000341947 EGFEM1PQ0D2K5 195 aa11.05□□□□□ -0.64
COL11A2-201ENST00000341947 Q6ZVQ6 151 aa11.05□□□□□ -0.64
COL11A2-201ENST00000341947 REG3GQ6UW15 175 aa11.04□□□□□ -0.64
COL11A2-201ENST00000341947 AVPP01185 164 aa11.04□□□□□ -0.64
COL11A2-201ENST00000341947 NUP210LQ5VU65 1888 aa11.03□□□□□ -0.64
COL11A2-201ENST00000341947 ODF3L2Q3SX64 289 aa11.03□□□□□ -0.64
COL11A2-201ENST00000341947 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
COL11A2-201ENST00000341947 IMUPQ9GZP8 106 aa11.03□□□□□ -0.64
COL11A2-201ENST00000341947 A6NED7 52 aa11.03□□□□□ -0.64
COL11A2-201ENST00000341947 PRR4Q16378 134 aa11.03□□□□□ -0.64
COL11A2-201ENST00000341947 DSCAMO60469 2012 aa11.03□□□□□ -0.64
COL11A2-201ENST00000341947 POM121L12Q8N7R1 296 aa11.02□□□□□ -0.64
COL11A2-201ENST00000341947 CDSNQ15517 529 aa11.02□□□□□ -0.65
COL11A2-201ENST00000341947 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.65
COL11A2-201ENST00000341947 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.65
COL11A2-201ENST00000341947 ARHGAP21Q5T5U3 1957 aa11.01□□□□□ -0.65
COL11A2-201ENST00000341947 C6orf223Q8N319 242 aa11.01□□□□□ -0.65
COL11A2-201ENST00000341947 ESRGQ1W209 222 aa11.01□□□□□ -0.65
COL11A2-201ENST00000341947 IGLV1-51P01701 117 aa11.01□□□□□ -0.65
COL11A2-201ENST00000341947 EDN2P20800 178 aa11□□□□□ -0.65
COL11A2-201ENST00000341947 FREM1Q5H8C1 2179 aa11□□□□□ -0.65
COL11A2-201ENST00000341947 A0A0U1RQV1 116 aa11□□□□□ -0.65
COL11A2-201ENST00000341947 BRI3O95415 125 aa11□□□□□ -0.65
COL11A2-201ENST00000341947 GAS8-AS1O95177 125 aa10.99□□□□□ -0.65
COL11A2-201ENST00000341947 LINC00242Q5T6M2 205 aa10.99□□□□□ -0.65
COL11A2-201ENST00000341947 KRTAP10-9P60411 292 aa10.99□□□□□ -0.65
COL11A2-201ENST00000341947 C2orf91Q6ZV80 131 aa10.98□□□□□ -0.65
COL11A2-201ENST00000341947 Q6JHZ5 121 aa10.98□□□□□ -0.65
COL11A2-201ENST00000341947 NTM-AS1Q6ZSK4 140 aa10.98□□□□□ -0.65
COL11A2-201ENST00000341947 CNFNQ9BYD5 112 aa10.98□□□□□ -0.65
COL11A2-201ENST00000341947 C16orf95Q9H693 158 aa10.98□□□□□ -0.65
COL11A2-201ENST00000341947 FSHBP01225 129 aa10.98□□□□□ -0.65
COL11A2-201ENST00000341947 TRBV10-3A0A0K0K1G6 114 aa10.97□□□□□ -0.65
COL11A2-201ENST00000341947 IGIPA6NJ69 53 aa10.97□□□□□ -0.65
COL11A2-201ENST00000341947 C1orf137Q5JT78 98 aa10.97□□□□□ -0.65
COL11A2-201ENST00000341947 Q6ZTC4 211 aa10.97□□□□□ -0.65
COL11A2-201ENST00000341947 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
COL11A2-201ENST00000341947 C9orf116Q5BN46 136 aaPredicted RBP10.96□□□□□ -0.65
COL11A2-201ENST00000341947 SMIM1B2RUZ4 78 aa10.95□□□□□ -0.66
COL11A2-201ENST00000341947 LINC01556Q5JQF7 62 aa10.95□□□□□ -0.66
COL11A2-201ENST00000341947 CRIP2P52943 208 aaPredicted RBP10.95□□□□□ -0.66
COL11A2-201ENST00000341947 FHL2Q14192 279 aa10.95□□□□□ -0.66
COL11A2-201ENST00000341947 Q8N814 137 aa10.95□□□□□ -0.66
COL11A2-201ENST00000341947 IGHV6-1A0A0B4J1U7 121 aa10.95□□□□□ -0.66
COL11A2-201ENST00000341947 CELA1Q9UNI1 258 aa10.95□□□□□ -0.66
COL11A2-201ENST00000341947 C1orf134Q5TEV5 83 aa10.94□□□□□ -0.66
COL11A2-201ENST00000341947 COX7CP15954 63 aa10.94□□□□□ -0.66
COL11A2-201ENST00000341947 F8WDY8 70 aa10.94□□□□□ -0.66
COL11A2-201ENST00000341947 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
COL11A2-201ENST00000341947 OTOGLQ3ZCN5 2332 aa10.93□□□□□ -0.66
COL11A2-201ENST00000341947 IGLV4-60A0A075B6I1 120 aa10.93□□□□□ -0.66
COL11A2-201ENST00000341947 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
COL11A2-201ENST00000341947 COX6A2Q02221 97 aa10.92□□□□□ -0.66
COL11A2-201ENST00000341947 ANKHD1Q8IWZ3 2542 aaKnown RBP10.92□□□□□ -0.66
COL11A2-201ENST00000341947 Q9BRP9 147 aa10.91□□□□□ -0.66
COL11A2-201ENST00000341947 LINC00208Q96KT6 92 aa10.9□□□□□ -0.67
COL11A2-201ENST00000341947 RETNLBQ9BQ08 111 aa10.9□□□□□ -0.67
COL11A2-201ENST00000341947 LINC00694P0DN24 101 aa10.89□□□□□ -0.67
COL11A2-201ENST00000341947 X6R8D5 127 aa10.89□□□□□ -0.67
COL11A2-201ENST00000341947 PRYO14603 147 aa10.88□□□□□ -0.67
COL11A2-201ENST00000341947 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
COL11A2-201ENST00000341947 A0A087WYN8 130 aa10.87□□□□□ -0.67
COL11A2-201ENST00000341947 C2orf48Q96LS8 159 aa10.87□□□□□ -0.67
COL11A2-201ENST00000341947 TRAV7A0A075B6U4 112 aa10.87□□□□□ -0.67
COL11A2-201ENST00000341947 CSDC2Q9Y534 153 aaKnown RBP10.87□□□□□ -0.67
COL11A2-201ENST00000341947 TRBV7-6A0A0J9YX20 115 aa10.87□□□□□ -0.67
COL11A2-201ENST00000341947 ZNF580Q9UK33 172 aa10.87□□□□□ -0.67
COL11A2-201ENST00000341947 ACACBO00763 2458 aa10.86□□□□□ -0.67
COL11A2-201ENST00000341947 LYPD5Q6UWN5 251 aa10.86□□□□□ -0.67
COL11A2-201ENST00000341947 PCDH15Q96QU1 1955 aa10.86□□□□□ -0.67
COL11A2-201ENST00000341947 CCDC179H3BU77 68 aa10.85□□□□□ -0.67
COL11A2-201ENST00000341947 CEP192Q8TEP8 1941 aa10.85□□□□□ -0.67
COL11A2-201ENST00000341947 PRR14LQ5THK1 2151 aa10.85□□□□□ -0.67
COL11A2-201ENST00000341947 LINC01547P58512 204 aaPredicted RBP10.85□□□□□ -0.67
COL11A2-201ENST00000341947 XGP55808 180 aa10.84□□□□□ -0.67
COL11A2-201ENST00000341947 NHLRC4P0CG21 123 aaPredicted RBP10.84□□□□□ -0.67
COL11A2-201ENST00000341947 BEAN1Q3B7T3 259 aa10.83□□□□□ -0.68
COL11A2-201ENST00000341947 LIMD2Q9BT23 127 aa10.83□□□□□ -0.68
COL11A2-201ENST00000341947 AMELXQ99217 191 aa10.83□□□□□ -0.68
COL11A2-201ENST00000341947 CUL9Q8IWT3 2517 aa10.83□□□□□ -0.68
COL11A2-201ENST00000341947 Q6Q795 121 aa10.83□□□□□ -0.68
COL11A2-201ENST00000341947 A0A1B0GUV1 79 aa10.83□□□□□ -0.68
COL11A2-201ENST00000341947 BDP1A6H8Y1 2624 aa10.82□□□□□ -0.68
COL11A2-201ENST00000341947 NOTCH2Q04721 2471 aa10.82□□□□□ -0.68
COL11A2-201ENST00000341947 MUC22E2RYF6 1773 aaPredicted RBP10.82□□□□□ -0.68
COL11A2-201ENST00000341947 TSPEAR-AS2P59090 65 aa10.82□□□□□ -0.68
COL11A2-201ENST00000341947 A0A087WSZ3 146 aa10.81□□□□□ -0.68
COL11A2-201ENST00000341947 CSPG4Q6UVK1 2322 aa10.81□□□□□ -0.68
COL11A2-201ENST00000341947 SORL1Q92673 2214 aa10.81□□□□□ -0.68
COL11A2-201ENST00000341947 SPG11Q96JI7 2443 aa10.81□□□□□ -0.68
COL11A2-201ENST00000341947 LINC00575Q6W349 94 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms