RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 DAND5Q8N907 189 aa5.68□□□□□ -1.5
ATP2B4-201ENST00000341360 COX8CQ7Z4L0 72 aa5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 BBC3Q96PG8 261 aaPredicted RBP5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 F8P00451 2351 aa5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 SETD2Q9BYW2 2564 aaPredicted RBP5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 RNASE3P12724 160 aaKnown RBP5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 CRIP1P50238 77 aa5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 UBE2D3P61077 147 aa5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 UBE2D2P62837 147 aa5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 CHD7Q9P2D1 2997 aa5.67□□□□□ -1.5
ATP2B4-201ENST00000341360 XIRP2A4UGR9 3374 aa5.66□□□□□ -1.5
ATP2B4-201ENST00000341360 RNF185Q96GF1 192 aa5.66□□□□□ -1.5
ATP2B4-201ENST00000341360 C5orf42Q9H799 3197 aa5.66□□□□□ -1.5
ATP2B4-201ENST00000341360 EGFEM1PQ0D2K5 195 aa5.66□□□□□ -1.5
ATP2B4-201ENST00000341360 TRAV23DV6A0A075B6W5 121 aa5.66□□□□□ -1.5
ATP2B4-201ENST00000341360 LINC00959A0A1B0GUT2 108 aa5.65□□□□□ -1.5
ATP2B4-201ENST00000341360 TSHBP01222 138 aa5.65□□□□□ -1.5
ATP2B4-201ENST00000341360 IGHV4-30-4P0DP06 118 aa5.65□□□□□ -1.5
ATP2B4-201ENST00000341360 WFDC9Q8NEX5 89 aa5.65□□□□□ -1.5
ATP2B4-201ENST00000341360 TCL1BO95988 128 aa5.65□□□□□ -1.5
ATP2B4-201ENST00000341360 CEMP1Q6PRD7 247 aaPredicted RBP5.65□□□□□ -1.5
ATP2B4-201ENST00000341360 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
ATP2B4-201ENST00000341360 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.65□□□□□ -1.51
ATP2B4-201ENST00000341360 CSDC2Q9Y534 153 aaKnown RBP5.65□□□□□ -1.51
ATP2B4-201ENST00000341360 UBE2D1P51668 147 aa5.65□□□□□ -1.51
ATP2B4-201ENST00000341360 RANBP2P49792 3224 aaKnown RBP5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 CLEC2BQ92478 149 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 ODF3L2Q3SX64 289 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 NRACQ8N912 160 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 UBE2D4Q9Y2X8 147 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 REV3LO60673 3130 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 SPTBN5Q9NRC6 3674 aaKnown RBP5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 CHD9Q3L8U1 2897 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 IGKV3D-7A0A0C4DH55 119 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 FAM236AA0A1B0GUQ0 79 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 FAM236BA0A1B0GV22 79 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 J3KT08 172 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 C14orf132Q9NPU4 83 aa5.64□□□□□ -1.51
ATP2B4-201ENST00000341360 IGKV2D-26A0A0A0MRZ7 120 aa5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 TTTY13Q9BZ97 58 aa5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 SZT2Q5T011 3432 aa5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 UNC80Q8N2C7 3258 aa5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 TANC2Q9HCD6 1990 aa5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 RPL28P46779 137 aaKnown RBP5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 C10orf99Q6UWK7 81 aa5.63□□□□□ -1.51
ATP2B4-201ENST00000341360 USP17L23D6RBM5 183 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 MRPS12O15235 138 aaKnown RBP5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 C6orf99Q4VX62 202 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 IMUPQ9GZP8 106 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 TET2Q6N021 2002 aaPredicted RBP5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 A0A096LNJ9 63 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 NDUFC1O43677 76 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 FAM19A5Q7Z5A7 132 aaPredicted RBP5.62□□□□□ -1.51
ATP2B4-201ENST00000341360 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
ATP2B4-201ENST00000341360 BEAN1Q3B7T3 259 aa5.61□□□□□ -1.51
ATP2B4-201ENST00000341360 AVPP01185 164 aa5.61□□□□□ -1.51
ATP2B4-201ENST00000341360 K7ERS5 55 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 EYSQ5T1H1 3165 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 Q8N2B8 174 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 XAGE1AQ9HD64 81 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 A0A0J9YWU9 116 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 A0A1B0GUV1 79 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 MAPKAPK5-AS1Q8N8E1 139 aa5.6□□□□□ -1.51
ATP2B4-201ENST00000341360 Q6JHZ5 121 aa5.59□□□□□ -1.51
ATP2B4-201ENST00000341360 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.59□□□□□ -1.51
ATP2B4-201ENST00000341360 ZNF73O43830 326 aaPredicted RBP5.59□□□□□ -1.51
ATP2B4-201ENST00000341360 LY6G6CO95867 125 aa5.59□□□□□ -1.51
ATP2B4-201ENST00000341360 CCKP06307 115 aa5.59□□□□□ -1.51
ATP2B4-201ENST00000341360 RETNQ9HD89 108 aa5.59□□□□□ -1.51
ATP2B4-201ENST00000341360 C11orf21Q9P2W6 132 aa5.59□□□□□ -1.52
ATP2B4-201ENST00000341360 PRR9Q5T870 116 aa5.58□□□□□ -1.52
ATP2B4-201ENST00000341360 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
ATP2B4-201ENST00000341360 LST1O00453 97 aa5.58□□□□□ -1.52
ATP2B4-201ENST00000341360 UQCRQO14949 82 aa5.58□□□□□ -1.52
ATP2B4-201ENST00000341360 FSHBP01225 129 aa5.58□□□□□ -1.52
ATP2B4-201ENST00000341360 CDSNQ15517 529 aa5.58□□□□□ -1.52
ATP2B4-201ENST00000341360 B5MCH6 92 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 TRIAP1O43715 76 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 TRANK1O15050 2925 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 PLAC8L1A1L4L8 177 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 IGIPA6NJ69 53 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 PROK1P58294 105 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 Q6ZQY7 126 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 Q6ZS46 218 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 ACANP16112 2415 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 NANOS2P60321 138 aaKnown RBP5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 C1orf195Q5TG92 126 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 PLXNB1O43157 2135 aa5.57□□□□□ -1.52
ATP2B4-201ENST00000341360 CYSRT1A8MQ03 144 aa5.56□□□□□ -1.52
ATP2B4-201ENST00000341360 SMR3AQ99954 134 aa5.56□□□□□ -1.52
ATP2B4-201ENST00000341360 KRTAP10-9P60411 292 aa5.56□□□□□ -1.52
ATP2B4-201ENST00000341360 C18orf65Q6ZTR6 163 aa5.56□□□□□ -1.52
ATP2B4-201ENST00000341360 HECTD1Q9ULT8 2610 aa5.56□□□□□ -1.52
ATP2B4-201ENST00000341360 LRCOL1A6NCL2 159 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms