RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 PNRC1Q12796 327 aaPredicted RBP8.72□□□□□ -1.01
COMMD4-202ENST00000338995 TIMM21Q9BVV7 248 aa8.72□□□□□ -1.01
COMMD4-202ENST00000338995 OSTCQ9NRP0 149 aa8.72□□□□□ -1.01
COMMD4-202ENST00000338995 UBE2D4Q9Y2X8 147 aa8.72□□□□□ -1.01
COMMD4-202ENST00000338995 APOC3P02656 99 aa8.71□□□□□ -1.02
COMMD4-202ENST00000338995 SPAG11BQ08648 103 aa8.71□□□□□ -1.02
COMMD4-202ENST00000338995 OR10D4PQ8NGN7 298 aa8.71□□□□□ -1.02
COMMD4-202ENST00000338995 OPRPNQ99935 248 aaPredicted RBP8.71□□□□□ -1.02
COMMD4-202ENST00000338995 A0A087WZ39 114 aa8.7□□□□□ -1.02
COMMD4-202ENST00000338995 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
COMMD4-202ENST00000338995 SMKR1H3BMG3 65 aa8.69□□□□□ -1.02
COMMD4-202ENST00000338995 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
COMMD4-202ENST00000338995 SVBPQ8N300 66 aa8.69□□□□□ -1.02
COMMD4-202ENST00000338995 C20orf78Q9BR46 151 aa8.69□□□□□ -1.02
COMMD4-202ENST00000338995 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
COMMD4-202ENST00000338995 NDUFA1O15239 70 aa8.68□□□□□ -1.02
COMMD4-202ENST00000338995 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
COMMD4-202ENST00000338995 S100A1P23297 94 aa8.68□□□□□ -1.02
COMMD4-202ENST00000338995 ORAOV1Q8WV07 137 aa8.68□□□□□ -1.02
COMMD4-202ENST00000338995 SNAPINO95295 136 aa8.67□□□□□ -1.02
COMMD4-202ENST00000338995 NRACQ8N912 160 aa8.67□□□□□ -1.02
COMMD4-202ENST00000338995 NAT8BQ9UHF3 227 aa8.67□□□□□ -1.02
COMMD4-202ENST00000338995 MT-ND4LP03901 98 aa8.66□□□□□ -1.02
COMMD4-202ENST00000338995 CKS2P33552 79 aa8.66□□□□□ -1.02
COMMD4-202ENST00000338995 RHEBQ15382 184 aa8.66□□□□□ -1.02
COMMD4-202ENST00000338995 FAM104BQ5XKR9 115 aa8.66□□□□□ -1.02
COMMD4-202ENST00000338995 Q6ZUT4 128 aa8.66□□□□□ -1.02
COMMD4-202ENST00000338995 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
COMMD4-202ENST00000338995 IGLV1-50A0A075B6I6 118 aa8.65□□□□□ -1.02
COMMD4-202ENST00000338995 A0A1B0GW15 77 aa8.65□□□□□ -1.02
COMMD4-202ENST00000338995 RPL32P62910 135 aaKnown RBP8.65□□□□□ -1.02
COMMD4-202ENST00000338995 SPANXA1Q9NS26 97 aa8.65□□□□□ -1.02
COMMD4-202ENST00000338995 TRBV24-1A0A075B6N3 115 aa8.64□□□□□ -1.03
COMMD4-202ENST00000338995 H0Y9J4 135 aa8.64□□□□□ -1.03
COMMD4-202ENST00000338995 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
COMMD4-202ENST00000338995 HBBP68871 147 aa8.64□□□□□ -1.03
COMMD4-202ENST00000338995 MRPL51Q4U2R6 128 aaKnown RBP8.64□□□□□ -1.03
COMMD4-202ENST00000338995 RPS10P5Q9NQ39 176 aa8.64□□□□□ -1.03
COMMD4-202ENST00000338995 V9GYV3 84 aa8.64□□□□□ -1.03
COMMD4-202ENST00000338995 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 IGHV3OR16-9A0A0B4J2B5 98 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 S100A8P05109 93 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 UBE2D1P51668 147 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 UBE2BP63146 152 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 MRPS36P82909 103 aaKnown RBP8.63□□□□□ -1.03
COMMD4-202ENST00000338995 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
COMMD4-202ENST00000338995 IFITM10A6NMD0 228 aa8.62□□□□□ -1.03
COMMD4-202ENST00000338995 UNQ6190/PRO20217Q6UXQ8 127 aa8.62□□□□□ -1.03
COMMD4-202ENST00000338995 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
COMMD4-202ENST00000338995 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
COMMD4-202ENST00000338995 RAB5AP20339 215 aa8.61□□□□□ -1.03
COMMD4-202ENST00000338995 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
COMMD4-202ENST00000338995 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
COMMD4-202ENST00000338995 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-202ENST00000338995 FAM168BA1KXE4 195 aa8.6□□□□□ -1.03
COMMD4-202ENST00000338995 PPBPP02775 128 aa8.6□□□□□ -1.03
COMMD4-202ENST00000338995 IFI27P40305 119 aaPredicted RBP8.6□□□□□ -1.03
COMMD4-202ENST00000338995 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
COMMD4-202ENST00000338995 PACRGQ96M98 296 aaPredicted RBP8.6□□□□□ -1.03
COMMD4-202ENST00000338995 SMIM2Q9BVW6 85 aa8.6□□□□□ -1.03
COMMD4-202ENST00000338995 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
COMMD4-202ENST00000338995 TRBV30A0A0K0K1B3 111 aa8.59□□□□□ -1.03
COMMD4-202ENST00000338995 SMIM27A0A1W2PRY6 76 aa8.59□□□□□ -1.03
COMMD4-202ENST00000338995 PRR4Q16378 134 aa8.59□□□□□ -1.03
COMMD4-202ENST00000338995 M0QXV9 152 aa8.58□□□□□ -1.04
COMMD4-202ENST00000338995 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
COMMD4-202ENST00000338995 D6R8Y8 96 aa8.57□□□□□ -1.04
COMMD4-202ENST00000338995 NDUFC2-KCTD14E9PQ53 114 aa8.57□□□□□ -1.04
COMMD4-202ENST00000338995 S100PP25815 95 aa8.57□□□□□ -1.04
COMMD4-202ENST00000338995 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
COMMD4-202ENST00000338995 SCO1O75880 301 aa8.56□□□□□ -1.04
COMMD4-202ENST00000338995 SMCO4Q9NRQ5 59 aa8.56□□□□□ -1.04
COMMD4-202ENST00000338995 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
COMMD4-202ENST00000338995 PRSS2P07478 247 aa8.55□□□□□ -1.04
COMMD4-202ENST00000338995 KIAA0087Q14695 138 aa8.55□□□□□ -1.04
COMMD4-202ENST00000338995 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
COMMD4-202ENST00000338995 LINC01561Q8N1V8 128 aa8.55□□□□□ -1.04
COMMD4-202ENST00000338995 FAM104AQ969W3 186 aa8.55□□□□□ -1.04
COMMD4-202ENST00000338995 C2orf88Q9BSF0 95 aa8.55□□□□□ -1.04
COMMD4-202ENST00000338995 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
COMMD4-202ENST00000338995 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
COMMD4-202ENST00000338995 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
COMMD4-202ENST00000338995 TEX43Q6ZNM6 134 aa8.54□□□□□ -1.04
COMMD4-202ENST00000338995 TMEM136Q6ZRR5 245 aa8.54□□□□□ -1.04
COMMD4-202ENST00000338995 ORMDL3Q8N138 153 aa8.54□□□□□ -1.04
COMMD4-202ENST00000338995 TMEM141Q96I45 108 aa8.54□□□□□ -1.04
COMMD4-202ENST00000338995 TRAV9-1A0A075B6T8 112 aa8.53□□□□□ -1.04
COMMD4-202ENST00000338995 NUPR1O60356 82 aa8.53□□□□□ -1.04
COMMD4-202ENST00000338995 ZNF861PO60384 105 aa8.53□□□□□ -1.04
COMMD4-202ENST00000338995 NPYP01303 97 aa8.53□□□□□ -1.04
COMMD4-202ENST00000338995 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
COMMD4-202ENST00000338995 CKS1BP61024 79 aa8.53□□□□□ -1.04
COMMD4-202ENST00000338995 Q6ZN92 141 aa8.53□□□□□ -1.04
COMMD4-202ENST00000338995 C6orf226Q5I0X4 101 aa8.52□□□□□ -1.05
COMMD4-202ENST00000338995 C2orf82Q6UX34 121 aa8.52□□□□□ -1.05
COMMD4-202ENST00000338995 PRELID3AQ96N28 172 aa8.52□□□□□ -1.05
COMMD4-202ENST00000338995 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
COMMD4-202ENST00000338995 YPEL4Q96NS1 127 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms