RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
PSPC1-201ENST00000338910 C3orf56Q8N813 242 aa13.5□□□□□ -0.25
PSPC1-201ENST00000338910 NDUFA1O15239 70 aa13.49□□□□□ -0.25
PSPC1-201ENST00000338910 ODF3L2Q3SX64 289 aa13.49□□□□□ -0.25
PSPC1-201ENST00000338910 Q9UF83 564 aa13.49□□□□□ -0.25
PSPC1-201ENST00000338910 SMCR5Q8TEV8 140 aa13.49□□□□□ -0.25
PSPC1-201ENST00000338910 JMJD1CQ15652 2540 aa13.48□□□□□ -0.25
PSPC1-201ENST00000338910 COX7A2LO14548 114 aa13.48□□□□□ -0.25
PSPC1-201ENST00000338910 CDKN2A-AS1Q9UH64 79 aa13.48□□□□□ -0.25
PSPC1-201ENST00000338910 NDUFA7O95182 113 aa13.47□□□□□ -0.25
PSPC1-201ENST00000338910 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.47□□□□□ -0.25
PSPC1-201ENST00000338910 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
PSPC1-201ENST00000338910 IGKV2-29A2NJV5 120 aaPredicted RBP13.47□□□□□ -0.25
PSPC1-201ENST00000338910 WIPF1O43516 503 aa13.47□□□□□ -0.25
PSPC1-201ENST00000338910 LINC00308Q8TCZ7 52 aa13.47□□□□□ -0.25
PSPC1-201ENST00000338910 XCL2Q9UBD3 114 aa13.47□□□□□ -0.25
PSPC1-201ENST00000338910 NACAE9PAV3 2078 aa13.46□□□□□ -0.25
PSPC1-201ENST00000338910 IGLV5-45A0A087WSX0 123 aa13.46□□□□□ -0.25
PSPC1-201ENST00000338910 LINC00643Q86TS7 51 aa13.45□□□□□ -0.26
PSPC1-201ENST00000338910 LINC00467Q9BRT7 94 aa13.45□□□□□ -0.26
PSPC1-201ENST00000338910 SDIM1Q6ZPB5 146 aa13.45□□□□□ -0.26
PSPC1-201ENST00000338910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.45□□□□□ -0.26
PSPC1-201ENST00000338910 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
PSPC1-201ENST00000338910 Q6ZSN1 163 aa13.44□□□□□ -0.26
PSPC1-201ENST00000338910 STHQ8IWL8 128 aa13.44□□□□□ -0.26
PSPC1-201ENST00000338910 TIRAPP58753 221 aa13.44□□□□□ -0.26
PSPC1-201ENST00000338910 IGHV3OR16-12A0A075B7B8 117 aa13.43□□□□□ -0.26
PSPC1-201ENST00000338910 INSP01308 110 aa13.43□□□□□ -0.26
PSPC1-201ENST00000338910 BEAN1Q3B7T3 259 aa13.43□□□□□ -0.26
PSPC1-201ENST00000338910 KRTAP10-3P60369 221 aa13.42□□□□□ -0.26
PSPC1-201ENST00000338910 ZNF415Q09FC8 603 aa13.42□□□□□ -0.26
PSPC1-201ENST00000338910 DAZ2Q13117 558 aaKnown RBP13.42□□□□□ -0.26
PSPC1-201ENST00000338910 DAZ4Q86SG3 579 aaKnown RBP13.42□□□□□ -0.26
PSPC1-201ENST00000338910 C3orf22Q8N5N4 141 aa13.42□□□□□ -0.26
PSPC1-201ENST00000338910 DAZ3Q9NR90 486 aaKnown RBP13.42□□□□□ -0.26
PSPC1-201ENST00000338910 IGLV5-39A0A0G2JS06 123 aa13.41□□□□□ -0.26
PSPC1-201ENST00000338910 Q9H8V8 135 aa13.41□□□□□ -0.26
PSPC1-201ENST00000338910 TENM1Q9UKZ4 2725 aa13.41□□□□□ -0.26
PSPC1-201ENST00000338910 SOSTDC1Q6X4U4 206 aa13.41□□□□□ -0.26
PSPC1-201ENST00000338910 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.26
PSPC1-201ENST00000338910 TRACP01848 142 aa13.4□□□□□ -0.26
PSPC1-201ENST00000338910 C11orf72Q8NBR9 251 aa13.4□□□□□ -0.26
PSPC1-201ENST00000338910 PPDPFQ9H3Y8 114 aa13.4□□□□□ -0.26
PSPC1-201ENST00000338910 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
PSPC1-201ENST00000338910 COX6A2Q02221 97 aa13.4□□□□□ -0.26
PSPC1-201ENST00000338910 C9orf153Q5TBE3 101 aa13.4□□□□□ -0.26
PSPC1-201ENST00000338910 VWFP04275 2813 aa13.39□□□□□ -0.27
PSPC1-201ENST00000338910 IGHV3-38A0A0C4DH36 116 aa13.39□□□□□ -0.27
PSPC1-201ENST00000338910 UQCRQO14949 82 aa13.39□□□□□ -0.27
PSPC1-201ENST00000338910 ATP5G1P05496 136 aa13.38□□□□□ -0.27
PSPC1-201ENST00000338910 PIK3CD-AS1Q5SR53 167 aa13.38□□□□□ -0.27
PSPC1-201ENST00000338910 ZNF625Q96I27 306 aaPredicted RBP13.38□□□□□ -0.27
PSPC1-201ENST00000338910 A0A0U1RRA0 63 aa13.38□□□□□ -0.27
PSPC1-201ENST00000338910 BAALC-AS2P0C853 105 aa13.38□□□□□ -0.27
PSPC1-201ENST00000338910 C5orf38Q86SI9 138 aa13.38□□□□□ -0.27
PSPC1-201ENST00000338910 C1orf158Q8N1D5 194 aa13.38□□□□□ -0.27
PSPC1-201ENST00000338910 WFDC10AQ9H1F0 79 aa13.38□□□□□ -0.27
PSPC1-201ENST00000338910 LINC00526Q96FQ7 95 aa13.37□□□□□ -0.27
PSPC1-201ENST00000338910 CXCL5P42830 114 aa13.37□□□□□ -0.27
PSPC1-201ENST00000338910 COPS9Q8WXC6 57 aa13.37□□□□□ -0.27
PSPC1-201ENST00000338910 LINC00694P0DN24 101 aa13.36□□□□□ -0.27
PSPC1-201ENST00000338910 FAM222AQ5U5X8 452 aa13.36□□□□□ -0.27
PSPC1-201ENST00000338910 F8P00451 2351 aa13.36□□□□□ -0.27
PSPC1-201ENST00000338910 ATRQ13535 2644 aa13.36□□□□□ -0.27
PSPC1-201ENST00000338910 IGLV1-51P01701 117 aa13.35□□□□□ -0.27
PSPC1-201ENST00000338910 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
PSPC1-201ENST00000338910 HERVK_113P63121 156 aa13.35□□□□□ -0.27
PSPC1-201ENST00000338910 LINC00242Q5T6M2 205 aa13.35□□□□□ -0.27
PSPC1-201ENST00000338910 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
PSPC1-201ENST00000338910 FAM218AQ96MZ4 157 aa13.35□□□□□ -0.27
PSPC1-201ENST00000338910 CSDC2Q9Y534 153 aaKnown RBP13.34□□□□□ -0.27
PSPC1-201ENST00000338910 DGAT2L7PQ6IED9 249 aa13.34□□□□□ -0.27
PSPC1-201ENST00000338910 SMIM1B2RUZ4 78 aa13.33□□□□□ -0.27
PSPC1-201ENST00000338910 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
PSPC1-201ENST00000338910 FAM19A3Q7Z5A8 133 aa13.32□□□□□ -0.28
PSPC1-201ENST00000338910 INAFM2P0DMQ5 153 aa13.31□□□□□ -0.28
PSPC1-201ENST00000338910 PF4P02776 101 aa13.31□□□□□ -0.28
PSPC1-201ENST00000338910 PRIMA1Q86XR5 153 aa13.31□□□□□ -0.28
PSPC1-201ENST00000338910 TEP1Q99973 2627 aaKnown RBP13.31□□□□□ -0.28
PSPC1-201ENST00000338910 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
PSPC1-201ENST00000338910 COX7CP15954 63 aa13.3□□□□□ -0.28
PSPC1-201ENST00000338910 CMC4P56277 68 aaPredicted RBP13.3□□□□□ -0.28
PSPC1-201ENST00000338910 C19orf73Q9NVV2 129 aa13.3□□□□□ -0.28
PSPC1-201ENST00000338910 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
PSPC1-201ENST00000338910 HIST1H4AP62805 103 aaKnown RBP13.3□□□□□ -0.28
PSPC1-201ENST00000338910 C2orf48Q96LS8 159 aa13.3□□□□□ -0.28
PSPC1-201ENST00000338910 GAGE2AQ6NT46 116 aa13.29□□□□□ -0.28
PSPC1-201ENST00000338910 RS1O15537 224 aa13.28□□□□□ -0.28
PSPC1-201ENST00000338910 KLK5Q9Y337 293 aaPredicted RBP13.28□□□□□ -0.28
PSPC1-201ENST00000338910 MALP21145 153 aa13.27□□□□□ -0.29
PSPC1-201ENST00000338910 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.29
PSPC1-201ENST00000338910 Q9HAA7 133 aa13.27□□□□□ -0.29
PSPC1-201ENST00000338910 F5H768 121 aa13.27□□□□□ -0.29
PSPC1-201ENST00000338910 RPL28P46779 137 aaKnown RBP13.26□□□□□ -0.29
PSPC1-201ENST00000338910 Q6ZTI0 123 aa13.26□□□□□ -0.29
PSPC1-201ENST00000338910 LOC107984640A0A0U1RRK4 108 aa13.25□□□□□ -0.29
PSPC1-201ENST00000338910 CRYGAP11844 174 aa13.25□□□□□ -0.29
PSPC1-201ENST00000338910 TRAV13-1A0A0B4J241 112 aa13.25□□□□□ -0.29
PSPC1-201ENST00000338910 IL17DQ8TAD2 202 aa13.25□□□□□ -0.29
PSPC1-201ENST00000338910 A0A1B0GX51 115 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms