RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 DAZ2Q13117 558 aaKnown RBP6.23□□□□□ -1.41
SNCA-201ENST00000336904 MEIG1Q5JSS6 88 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 CDC42SE2Q9NRR3 84 aa6.23□□□□□ -1.41
SNCA-201ENST00000336904 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
SNCA-201ENST00000336904 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
SNCA-201ENST00000336904 FAM222AQ5U5X8 452 aa6.22□□□□□ -1.41
SNCA-201ENST00000336904 ERG28Q9UKR5 140 aa6.22□□□□□ -1.41
SNCA-201ENST00000336904 C9JAW5 83 aa6.22□□□□□ -1.41
SNCA-201ENST00000336904 PRIMA1Q86XR5 153 aa6.22□□□□□ -1.41
SNCA-201ENST00000336904 COL6A5A8TX70 2615 aa6.22□□□□□ -1.41
SNCA-201ENST00000336904 IGLV10-54A0A075B6I4 117 aa6.21□□□□□ -1.41
SNCA-201ENST00000336904 DAZ4Q86SG3 579 aaKnown RBP6.21□□□□□ -1.41
SNCA-201ENST00000336904 C1QTNF4Q9BXJ3 329 aa6.21□□□□□ -1.41
SNCA-201ENST00000336904 DAZ3Q9NR90 486 aaKnown RBP6.21□□□□□ -1.41
SNCA-201ENST00000336904 X6R8D5 127 aa6.21□□□□□ -1.41
SNCA-201ENST00000336904 TRIAP1O43715 76 aa6.21□□□□□ -1.42
SNCA-201ENST00000336904 SBSPONQ8IVN8 264 aa6.21□□□□□ -1.42
SNCA-201ENST00000336904 CLUHP3Q96NS8 147 aa6.21□□□□□ -1.42
SNCA-201ENST00000336904 CELA1Q9UNI1 258 aa6.21□□□□□ -1.42
SNCA-201ENST00000336904 ANK2Q01484 3957 aa6.21□□□□□ -1.42
SNCA-201ENST00000336904 F8W1H4 67 aa6.2□□□□□ -1.42
SNCA-201ENST00000336904 XCL1P47992 114 aa6.2□□□□□ -1.42
SNCA-201ENST00000336904 ZFAND6Q6FIF0 208 aa6.2□□□□□ -1.42
SNCA-201ENST00000336904 SOSTDC1Q6X4U4 206 aa6.2□□□□□ -1.42
SNCA-201ENST00000336904 TRBV10-1A0A0K0K1A3 114 aa6.2□□□□□ -1.42
SNCA-201ENST00000336904 MIAQ16674 131 aa6.2□□□□□ -1.42
SNCA-201ENST00000336904 OXLD1Q5BKU9 147 aa6.2□□□□□ -1.42
SNCA-201ENST00000336904 PFN2P35080 140 aa6.19□□□□□ -1.42
SNCA-201ENST00000336904 RPL13AP40429 203 aaKnown RBP6.19□□□□□ -1.42
SNCA-201ENST00000336904 SMAGPQ0VAQ4 97 aa6.19□□□□□ -1.42
SNCA-201ENST00000336904 FAM110AQ9BQ89 295 aa6.19□□□□□ -1.42
SNCA-201ENST00000336904 RETNQ9HD89 108 aa6.19□□□□□ -1.42
SNCA-201ENST00000336904 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
SNCA-201ENST00000336904 HERVK_113P63121 156 aa6.19□□□□□ -1.42
SNCA-201ENST00000336904 F5H768 121 aa6.18□□□□□ -1.42
SNCA-201ENST00000336904 ANKRD29Q8N6D5 301 aa6.18□□□□□ -1.42
SNCA-201ENST00000336904 IGHV4-28A0A0C4DH34 117 aa6.18□□□□□ -1.42
SNCA-201ENST00000336904 TRBV6-4A0A1B0GX49 114 aa6.18□□□□□ -1.42
SNCA-201ENST00000336904 OVOL2Q9BRP0 275 aa6.18□□□□□ -1.42
SNCA-201ENST00000336904 NBEAL1Q6ZS30 2694 aa6.18□□□□□ -1.42
SNCA-201ENST00000336904 LINC00526Q96FQ7 95 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 NDUFA1O15239 70 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 TIRAPP58753 221 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 ATP6V0E2Q8NHE4 81 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 C2orf82Q6UX34 121 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 ICOSQ9Y6W8 199 aa6.17□□□□□ -1.42
SNCA-201ENST00000336904 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
SNCA-201ENST00000336904 TRAV26-1A0A087WT03 109 aa6.16□□□□□ -1.42
SNCA-201ENST00000336904 PAX4O43316 350 aa6.16□□□□□ -1.42
SNCA-201ENST00000336904 SLC25A20O43772 301 aa6.16□□□□□ -1.42
SNCA-201ENST00000336904 CRYBA4P53673 196 aa6.16□□□□□ -1.42
SNCA-201ENST00000336904 CMC4P56277 68 aaPredicted RBP6.16□□□□□ -1.42
SNCA-201ENST00000336904 A0A0B4J2C4 111 aa6.16□□□□□ -1.42
SNCA-201ENST00000336904 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
SNCA-201ENST00000336904 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.15□□□□□ -1.42
SNCA-201ENST00000336904 A0A1B0GV72 72 aa6.15□□□□□ -1.42
SNCA-201ENST00000336904 GAGE12HA6NDE8 117 aa6.15□□□□□ -1.42
SNCA-201ENST00000336904 PRB2P02812 416 aaPredicted RBP6.15□□□□□ -1.42
SNCA-201ENST00000336904 FOXI1Q12951 378 aa6.15□□□□□ -1.42
SNCA-201ENST00000336904 C9orf66Q5T8R8 295 aa6.15□□□□□ -1.42
SNCA-201ENST00000336904 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.43
SNCA-201ENST00000336904 LINC00158P58513 81 aa6.15□□□□□ -1.43
SNCA-201ENST00000336904 MIR7-3HGQ8N6C7 128 aa6.15□□□□□ -1.43
SNCA-201ENST00000336904 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.43
SNCA-201ENST00000336904 SPANXDQ9BXN6 97 aa6.15□□□□□ -1.43
SNCA-201ENST00000336904 SPANXCQ9NY87 97 aa6.15□□□□□ -1.43
SNCA-201ENST00000336904 LINC00269Q8N2A0 174 aa6.15□□□□□ -1.43
SNCA-201ENST00000336904 IGHV4-30-4P0DP06 118 aa6.14□□□□□ -1.43
SNCA-201ENST00000336904 DAD1P61803 113 aa6.14□□□□□ -1.43
SNCA-201ENST00000336904 CIRBPQ14011 172 aaKnown RBP6.14□□□□□ -1.43
SNCA-201ENST00000336904 COX7B2Q8TF08 81 aa6.14□□□□□ -1.43
SNCA-201ENST00000336904 ANGP03950 147 aaKnown RBP6.13□□□□□ -1.43
SNCA-201ENST00000336904 LINC01620Q4KN68 170 aa6.13□□□□□ -1.43
SNCA-201ENST00000336904 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
SNCA-201ENST00000336904 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
SNCA-201ENST00000336904 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
SNCA-201ENST00000336904 PRO0255Q9UI72 69 aa6.13□□□□□ -1.43
SNCA-201ENST00000336904 CSDC2Q9Y534 153 aaKnown RBP6.13□□□□□ -1.43
SNCA-201ENST00000336904 LYRM7Q5U5X0 104 aa6.12□□□□□ -1.43
SNCA-201ENST00000336904 CITED1Q99966 193 aa6.12□□□□□ -1.43
SNCA-201ENST00000336904 IGHV3OR16-9A0A0B4J2B5 98 aa6.12□□□□□ -1.43
SNCA-201ENST00000336904 TEN1Q86WV5 123 aa6.12□□□□□ -1.43
SNCA-201ENST00000336904 TRBV20-1A0A075B6N2 111 aa6.12□□□□□ -1.43
SNCA-201ENST00000336904 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
SNCA-201ENST00000336904 C6orf226Q5I0X4 101 aa6.11□□□□□ -1.43
SNCA-201ENST00000336904 KIR2DL5BQ8NHK3 375 aa6.11□□□□□ -1.43
SNCA-201ENST00000336904 MGAM2Q2M2H8 2515 aa6.11□□□□□ -1.43
SNCA-201ENST00000336904 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
SNCA-201ENST00000336904 Q9HAA7 133 aa6.11□□□□□ -1.43
SNCA-201ENST00000336904 H7C423 109 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 J3QR89 54 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 KRTAP10-11P60412 298 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 Q8NAQ8 132 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 BAHCC1Q9P281 2608 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 CYSRT1A8MQ03 144 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 LINC00337Q8N6G1 96 aa6.1□□□□□ -1.43
SNCA-201ENST00000336904 FAM218AQ96MZ4 157 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms