RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CDKN2A-AS1Q9UH64 79 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 IGIPA6NJ69 53 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 M0QY20 66 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 NDUFA7O95182 113 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 LY6G6DO95868 133 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
HMG20A-201ENST00000336216 K7EQD1 137 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 COX8CQ7Z4L0 72 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 IGHV4-4A0A075B6R2 117 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 LGALS9O00182 355 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 POLR2KP53803 58 aaKnown RBP4.75□□□□□ -1.65
HMG20A-201ENST00000336216 PSMG3-AS1Q96PY0 264 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 TMEM223A0PJW6 202 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 APOC4P55056 127 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 RPL32P62910 135 aaKnown RBP4.74□□□□□ -1.65
HMG20A-201ENST00000336216 HERVK_113P63121 156 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 CSMD2Q7Z408 3487 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 FBN2P35556 2912 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 IGLV4-3A0A075B6K6 122 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 IGKV3D-7A0A0C4DH55 119 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 TINCRA0A1B0GVN0 87 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 ZNF561-AS1K7EIQ3 104 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 BAALC-AS2P0C853 105 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 TMEM263Q8WUH6 116 aaKnown RBP4.74□□□□□ -1.65
HMG20A-201ENST00000336216 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 KLK12Q9UKR0 248 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 ANK3Q12955 4377 aaKnown RBP4.74□□□□□ -1.65
HMG20A-201ENST00000336216 FAM222AQ5U5X8 452 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 SHISA2Q6UWI4 295 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 LINC00526Q96FQ7 95 aa4.74□□□□□ -1.65
HMG20A-201ENST00000336216 KLLNB2CW77 178 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 UBE2DNLQ8IWF7 75 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 ADAMTSL4-AS1Q5T5F5 129 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 ZNF575Q86XF7 245 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 IGKV2D-24A0A075B6R9 120 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 H7C423 109 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 ODF3L2Q3SX64 289 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 OXLD1Q5BKU9 147 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 C16orf74Q96GX8 76 aa4.73□□□□□ -1.65
HMG20A-201ENST00000336216 A0A0B4J2C4 111 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 TMEM89A2RUT3 159 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 PSCAO43653 123 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 SPANXA1Q9NS26 97 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 Q9UF83 564 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 IGHV1-58A0A0C4DH39 117 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 C9orf66Q5T8R8 295 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 TRBV27A0A0K0K1C4 114 aa4.72□□□□□ -1.65
HMG20A-201ENST00000336216 ATP5G1P05496 136 aa4.71□□□□□ -1.65
HMG20A-201ENST00000336216 POM121L12Q8N7R1 296 aa4.71□□□□□ -1.65
HMG20A-201ENST00000336216 LINC01546A6NGU7 62 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 SPART-AS1P0CW21 52 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 H3BT86 120 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 DAZ2Q13117 558 aaKnown RBP4.71□□□□□ -1.66
HMG20A-201ENST00000336216 MIAQ16674 131 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 PIK3CD-AS1Q5SR53 167 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 DAZ4Q86SG3 579 aaKnown RBP4.71□□□□□ -1.66
HMG20A-201ENST00000336216 LRRC75A-AS1Q8N1F1 130 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 MIR7-3HGQ8N6C7 128 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 SND1-IT1Q9HBX3 110 aa4.71□□□□□ -1.66
HMG20A-201ENST00000336216 DAZ3Q9NR90 486 aaKnown RBP4.71□□□□□ -1.66
HMG20A-201ENST00000336216 MED14OSP0DP75 135 aa4.7□□□□□ -1.66
HMG20A-201ENST00000336216 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
HMG20A-201ENST00000336216 KLK5Q9Y337 293 aaPredicted RBP4.7□□□□□ -1.66
HMG20A-201ENST00000336216 NIPBLQ6KC79 2804 aaeCLIP4.7□□□□□ -1.66
HMG20A-201ENST00000336216 TRBV30A0A0K0K1B3 111 aa4.7□□□□□ -1.66
HMG20A-201ENST00000336216 TRAV25A0A0B4J276 109 aa4.7□□□□□ -1.66
HMG20A-201ENST00000336216 ODF3Q96PU9 254 aa4.7□□□□□ -1.66
HMG20A-201ENST00000336216 SDIM1Q6ZPB5 146 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 Q6ZSN1 163 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 PRO0255Q9UI72 69 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 NHLRC4P0CG21 123 aaPredicted RBP4.69□□□□□ -1.66
HMG20A-201ENST00000336216 LINC00315P59091 139 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 C14orf132Q9NPU4 83 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 RNF152Q8N8N0 203 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 DNAJC30Q96LL9 226 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 KIF25-AS1Q9Y6Z4 181 aa4.69□□□□□ -1.66
HMG20A-201ENST00000336216 A0A1B0GX51 115 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 SOCS3O14543 225 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 HIGD2BQ4VC39 106 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-201ENST00000336216 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 LST1O00453 97 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 COX7B2Q8TF08 81 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 hADV29S1A0JD25 119 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 COX7A2LO14548 114 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 SLPIP03973 132 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 LINC00694P0DN24 101 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 LINC00308Q8TCZ7 52 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 C9orf85Q96MD7 179 aa4.68□□□□□ -1.66
HMG20A-201ENST00000336216 INAFM2P0DMQ5 153 aa4.67□□□□□ -1.66
HMG20A-201ENST00000336216 HILS1P60008 231 aa4.67□□□□□ -1.66
HMG20A-201ENST00000336216 PPDPFQ9H3Y8 114 aa4.67□□□□□ -1.66
HMG20A-201ENST00000336216 EIF4EBP3O60516 100 aaPredicted RBP4.67□□□□□ -1.66
HMG20A-201ENST00000336216 RBMY1FQ15415 496 aaKnown RBP4.67□□□□□ -1.66
HMG20A-201ENST00000336216 C1orf158Q8N1D5 194 aa4.67□□□□□ -1.66
HMG20A-201ENST00000336216 TRBV6-5A0A0K0K1A5 114 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms