RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CDH23Q9H251 3354 aa9.39□□□□□ -0.91
VSTM4-202ENST00000332853 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
VSTM4-202ENST00000332853 CHCHD7Q9BUK0 85 aa9.39□□□□□ -0.91
VSTM4-202ENST00000332853 UNC80Q8N2C7 3258 aa9.39□□□□□ -0.91
VSTM4-202ENST00000332853 A0A0J9YWU9 116 aa9.38□□□□□ -0.91
VSTM4-202ENST00000332853 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
VSTM4-202ENST00000332853 ZNF580Q9UK33 172 aa9.38□□□□□ -0.91
VSTM4-202ENST00000332853 NREPQ16612 68 aa9.38□□□□□ -0.91
VSTM4-202ENST00000332853 SPANXDQ9BXN6 97 aa9.38□□□□□ -0.91
VSTM4-202ENST00000332853 SS18L2Q9UHA2 77 aa9.37□□□□□ -0.91
VSTM4-202ENST00000332853 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
VSTM4-202ENST00000332853 KIR2DL5BQ8NHK3 375 aa9.37□□□□□ -0.91
VSTM4-202ENST00000332853 TLN2Q9Y4G6 2542 aa9.37□□□□□ -0.91
VSTM4-202ENST00000332853 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
VSTM4-202ENST00000332853 A0A1B0GX51 115 aa9.37□□□□□ -0.91
VSTM4-202ENST00000332853 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
VSTM4-202ENST00000332853 TRBV30A0A0K0K1B3 111 aa9.36□□□□□ -0.91
VSTM4-202ENST00000332853 MT-ATP8P03928 68 aa9.36□□□□□ -0.91
VSTM4-202ENST00000332853 LINC00242Q5T6M2 205 aa9.36□□□□□ -0.91
VSTM4-202ENST00000332853 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
VSTM4-202ENST00000332853 C16orf95Q9H693 158 aa9.36□□□□□ -0.91
VSTM4-202ENST00000332853 LELP1Q5T871 98 aa9.35□□□□□ -0.91
VSTM4-202ENST00000332853 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
VSTM4-202ENST00000332853 MYO18BQ8IUG5 2567 aa9.35□□□□□ -0.91
VSTM4-202ENST00000332853 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
VSTM4-202ENST00000332853 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
VSTM4-202ENST00000332853 PKIGQ9Y2B9 76 aa9.34□□□□□ -0.91
VSTM4-202ENST00000332853 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
VSTM4-202ENST00000332853 AGRNO00468 2067 aa9.34□□□□□ -0.91
VSTM4-202ENST00000332853 IGKV2-28A0A075B6P5 120 aa9.33□□□□□ -0.92
VSTM4-202ENST00000332853 IGKV2D-28P01615 120 aa9.33□□□□□ -0.92
VSTM4-202ENST00000332853 FHL2Q14192 279 aa9.33□□□□□ -0.92
VSTM4-202ENST00000332853 PRUNE2Q8WUY3 3088 aa9.33□□□□□ -0.92
VSTM4-202ENST00000332853 USP9XQ93008 2570 aaPredicted RBP9.33□□□□□ -0.92
VSTM4-202ENST00000332853 TIMM17BO60830 172 aa9.33□□□□□ -0.92
VSTM4-202ENST00000332853 M0R2N4 97 aa9.32□□□□□ -0.92
VSTM4-202ENST00000332853 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
VSTM4-202ENST00000332853 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
VSTM4-202ENST00000332853 A0A096LNI7 61 aa9.32□□□□□ -0.92
VSTM4-202ENST00000332853 ABCA12Q86UK0 2595 aa9.32□□□□□ -0.92
VSTM4-202ENST00000332853 H3BQ85 93 aa9.31□□□□□ -0.92
VSTM4-202ENST00000332853 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
VSTM4-202ENST00000332853 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
VSTM4-202ENST00000332853 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
VSTM4-202ENST00000332853 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
VSTM4-202ENST00000332853 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
VSTM4-202ENST00000332853 TRAV23DV6A0A075B6W5 121 aa9.29□□□□□ -0.92
VSTM4-202ENST00000332853 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
VSTM4-202ENST00000332853 RNF183Q96D59 192 aa9.29□□□□□ -0.92
VSTM4-202ENST00000332853 ZNF462Q96JM2 2506 aa9.29□□□□□ -0.92
VSTM4-202ENST00000332853 ATOX1O00244 68 aa9.29□□□□□ -0.92
VSTM4-202ENST00000332853 USP9YO00507 2555 aaPredicted RBP9.28□□□□□ -0.92
VSTM4-202ENST00000332853 BEAN1Q3B7T3 259 aa9.28□□□□□ -0.92
VSTM4-202ENST00000332853 CITED1Q99966 193 aa9.28□□□□□ -0.92
VSTM4-202ENST00000332853 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
VSTM4-202ENST00000332853 CYSRT1A8MQ03 144 aa9.28□□□□□ -0.92
VSTM4-202ENST00000332853 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
VSTM4-202ENST00000332853 LINC00643Q86TS7 51 aa9.27□□□□□ -0.92
VSTM4-202ENST00000332853 AMELXQ99217 191 aa9.27□□□□□ -0.92
VSTM4-202ENST00000332853 A0A087WZ39 114 aa9.27□□□□□ -0.93
VSTM4-202ENST00000332853 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.93
VSTM4-202ENST00000332853 UNQ6190/PRO20217Q6UXQ8 127 aa9.27□□□□□ -0.93
VSTM4-202ENST00000332853 Q6ZTC4 211 aa9.27□□□□□ -0.93
VSTM4-202ENST00000332853 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
VSTM4-202ENST00000332853 LST1O00453 97 aa9.27□□□□□ -0.93
VSTM4-202ENST00000332853 Q8IZM0 81 aa9.26□□□□□ -0.93
VSTM4-202ENST00000332853 Q8N2B8 174 aa9.26□□□□□ -0.93
VSTM4-202ENST00000332853 B9D2Q9BPU9 175 aa9.26□□□□□ -0.93
VSTM4-202ENST00000332853 CHKB-CPT1BH3BT56 60 aa9.26□□□□□ -0.93
VSTM4-202ENST00000332853 UPK3BQ9BT76 320 aa9.26□□□□□ -0.93
VSTM4-202ENST00000332853 SETD2Q9BYW2 2564 aaPredicted RBP9.26□□□□□ -0.93
VSTM4-202ENST00000332853 TRANK1O15050 2925 aa9.25□□□□□ -0.93
VSTM4-202ENST00000332853 IL17DQ8TAD2 202 aa9.25□□□□□ -0.93
VSTM4-202ENST00000332853 JMJD1CQ15652 2540 aa9.25□□□□□ -0.93
VSTM4-202ENST00000332853 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
VSTM4-202ENST00000332853 Q6ZQY7 126 aa9.24□□□□□ -0.93
VSTM4-202ENST00000332853 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
VSTM4-202ENST00000332853 POLQO75417 2590 aa9.24□□□□□ -0.93
VSTM4-202ENST00000332853 H0Y9J4 135 aa9.23□□□□□ -0.93
VSTM4-202ENST00000332853 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
VSTM4-202ENST00000332853 NDUFB1O75438 58 aa9.23□□□□□ -0.93
VSTM4-202ENST00000332853 C6orf223Q8N319 242 aa9.23□□□□□ -0.93
VSTM4-202ENST00000332853 XIRP2A4UGR9 3374 aa9.23□□□□□ -0.93
VSTM4-202ENST00000332853 FN1P02751 2386 aaKnown RBP9.23□□□□□ -0.93
VSTM4-202ENST00000332853 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
VSTM4-202ENST00000332853 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
VSTM4-202ENST00000332853 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
VSTM4-202ENST00000332853 ZFYVE26Q68DK2 2539 aa9.22□□□□□ -0.93
VSTM4-202ENST00000332853 PDE6GP18545 87 aa9.22□□□□□ -0.93
VSTM4-202ENST00000332853 LINC00315P59091 139 aa9.22□□□□□ -0.93
VSTM4-202ENST00000332853 Q9UF83 564 aa9.22□□□□□ -0.93
VSTM4-202ENST00000332853 LRRK2Q5S007 2527 aa9.21□□□□□ -0.93
VSTM4-202ENST00000332853 ANKRD17O75179 2603 aaKnown RBP9.21□□□□□ -0.93
VSTM4-202ENST00000332853 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.93
VSTM4-202ENST00000332853 COX17Q14061 63 aa9.21□□□□□ -0.93
VSTM4-202ENST00000332853 C3orf84H3BNL1 204 aa9.21□□□□□ -0.93
VSTM4-202ENST00000332853 BPY2O14599 106 aa9.21□□□□□ -0.93
VSTM4-202ENST00000332853 M0R378 163 aa9.21□□□□□ -0.94
VSTM4-202ENST00000332853 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
VSTM4-202ENST00000332853 C5orf47Q569G3 176 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms