RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
LIMS1-201ENST00000332345 VCX2Q9H322 139 aa9.05□□□□□ -0.96
LIMS1-201ENST00000332345 EPM2AB3EWF7 344 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 APOMO95445 188 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 SMR3BP02814 79 aaPredicted RBP9.04□□□□□ -0.96
LIMS1-201ENST00000332345 HAMPP81172 84 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 TOMM6Q96B49 74 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 SMCO4Q9NRQ5 59 aa9.04□□□□□ -0.96
LIMS1-201ENST00000332345 LINC01546A6NGU7 62 aa9.03□□□□□ -0.96
LIMS1-201ENST00000332345 IGIPA6NJ69 53 aa9.03□□□□□ -0.96
LIMS1-201ENST00000332345 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
LIMS1-201ENST00000332345 IGHV3OR16-9A0A0B4J2B5 98 aa9.02□□□□□ -0.97
LIMS1-201ENST00000332345 ERASQ7Z444 233 aa9.02□□□□□ -0.97
LIMS1-201ENST00000332345 TIMM17AQ99595 171 aa9.02□□□□□ -0.97
LIMS1-201ENST00000332345 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
LIMS1-201ENST00000332345 DPH3Q96FX2 82 aa9.01□□□□□ -0.97
LIMS1-201ENST00000332345 YPEL4Q96NS1 127 aa9.01□□□□□ -0.97
LIMS1-201ENST00000332345 SCGB3A1Q96QR1 104 aa9.01□□□□□ -0.97
LIMS1-201ENST00000332345 AMELXQ99217 191 aa9.01□□□□□ -0.97
LIMS1-201ENST00000332345 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
LIMS1-201ENST00000332345 SYCNQ0VAF6 134 aa9□□□□□ -0.97
LIMS1-201ENST00000332345 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
LIMS1-201ENST00000332345 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
LIMS1-201ENST00000332345 LINC00526Q96FQ7 95 aa9□□□□□ -0.97
LIMS1-201ENST00000332345 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
LIMS1-201ENST00000332345 IGLV4-69A0A075B6H9 119 aa8.99□□□□□ -0.97
LIMS1-201ENST00000332345 LINC00614P0C842 121 aa8.99□□□□□ -0.97
LIMS1-201ENST00000332345 UBE2D1P51668 147 aa8.99□□□□□ -0.97
LIMS1-201ENST00000332345 RAB5BP61020 215 aa8.99□□□□□ -0.97
LIMS1-201ENST00000332345 OR10D4PQ8NGN7 298 aa8.99□□□□□ -0.97
LIMS1-201ENST00000332345 CARD19Q96LW7 228 aa8.99□□□□□ -0.97
LIMS1-201ENST00000332345 A0A087WZ39 114 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 SEC11AP67812 179 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 COX6A2Q02221 97 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 ZC2HC1BQ5TFG8 222 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 Q5VSD8 79 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 CBLN2Q8IUK8 224 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 C18orf32Q8TCD1 76 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 C2orf48Q96LS8 159 aa8.98□□□□□ -0.97
LIMS1-201ENST00000332345 F8WDY8 70 aa8.97□□□□□ -0.97
LIMS1-201ENST00000332345 SPAG11BQ08648 103 aa8.97□□□□□ -0.97
LIMS1-201ENST00000332345 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
LIMS1-201ENST00000332345 ORAOV1Q8WV07 137 aa8.97□□□□□ -0.97
LIMS1-201ENST00000332345 CAMK2N2Q96S95 79 aa8.97□□□□□ -0.97
LIMS1-201ENST00000332345 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-201ENST00000332345 CIRBPQ14011 172 aaKnown RBP8.96□□□□□ -0.98
LIMS1-201ENST00000332345 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.98
LIMS1-201ENST00000332345 LINC01561Q8N1V8 128 aa8.96□□□□□ -0.98
LIMS1-201ENST00000332345 FAT1Q14517 4588 aa8.96□□□□□ -0.98
LIMS1-201ENST00000332345 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.95□□□□□ -0.98
LIMS1-201ENST00000332345 PLA2G1BP04054 148 aaKnown RBP8.95□□□□□ -0.98
LIMS1-201ENST00000332345 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
LIMS1-201ENST00000332345 HERVK_113P63121 156 aa8.95□□□□□ -0.98
LIMS1-201ENST00000332345 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
LIMS1-201ENST00000332345 LINC00474Q9P2X8 69 aa8.95□□□□□ -0.98
LIMS1-201ENST00000332345 PANO1I0J062 215 aa8.94□□□□□ -0.98
LIMS1-201ENST00000332345 Q6ZRU5 148 aa8.94□□□□□ -0.98
LIMS1-201ENST00000332345 SPACA4Q8TDM5 124 aa8.94□□□□□ -0.98
LIMS1-201ENST00000332345 HBDP02042 147 aa8.93□□□□□ -0.98
LIMS1-201ENST00000332345 CHTF8P0CG12 524 aa8.93□□□□□ -0.98
LIMS1-201ENST00000332345 RNF151Q2KHN1 245 aa8.93□□□□□ -0.98
LIMS1-201ENST00000332345 MAJINQ3KP22 176 aa8.93□□□□□ -0.98
LIMS1-201ENST00000332345 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
LIMS1-201ENST00000332345 CST9LQ9H4G1 147 aa8.93□□□□□ -0.98
LIMS1-201ENST00000332345 PCLOQ9Y6V0 5065 aa8.92□□□□□ -0.98
LIMS1-201ENST00000332345 A0A087WYN8 130 aa8.92□□□□□ -0.98
LIMS1-201ENST00000332345 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
LIMS1-201ENST00000332345 LOC107984640A0A0U1RRK4 108 aa8.92□□□□□ -0.98
LIMS1-201ENST00000332345 NDUFA1O15239 70 aa8.92□□□□□ -0.98
LIMS1-201ENST00000332345 INAFM2P0DMQ5 153 aa8.92□□□□□ -0.98
LIMS1-201ENST00000332345 PMVKQ15126 192 aa8.92□□□□□ -0.98
LIMS1-201ENST00000332345 VPS13BQ7Z7G8 4022 aa8.91□□□□□ -0.98
LIMS1-201ENST00000332345 A0A0J9YXV3 536 aa8.91□□□□□ -0.98
LIMS1-201ENST00000332345 TINCRA0A1B0GVN0 87 aa8.91□□□□□ -0.98
LIMS1-201ENST00000332345 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
LIMS1-201ENST00000332345 PACRGQ96M98 296 aaPredicted RBP8.91□□□□□ -0.98
LIMS1-201ENST00000332345 MRPL35Q9NZE8 188 aaKnown RBP8.91□□□□□ -0.98
LIMS1-201ENST00000332345 ABCA13Q86UQ4 5058 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 A0A096LNI7 61 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 A0A096LNJ9 63 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 ATP5LO75964 103 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 TRGC2P03986 189 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 PRSS2P07478 247 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 KIAA0087Q14695 138 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 PMCHL1Q16048 86 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 STPG4Q8N801 248 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 PLAC8Q9NZF1 115 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 CDKN2A-AS1Q9UH64 79 aa8.9□□□□□ -0.98
LIMS1-201ENST00000332345 COLCA2A8K830 154 aa8.89□□□□□ -0.99
LIMS1-201ENST00000332345 NDUFA6P56556 154 aa8.89□□□□□ -0.99
LIMS1-201ENST00000332345 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
LIMS1-201ENST00000332345 PDZD11Q5EBL8 140 aa8.89□□□□□ -0.99
LIMS1-201ENST00000332345 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
LIMS1-201ENST00000332345 UNQ6190/PRO20217Q6UXQ8 127 aa8.89□□□□□ -0.99
LIMS1-201ENST00000332345 BAGE3Q86Y29 109 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms