RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 USMG5Q96IX5 58 aa13.16□□□□□ -0.3
PKP3-201ENST00000331563 IGKV3D-7A0A0C4DH55 119 aa13.15□□□□□ -0.3
PKP3-201ENST00000331563 DNAL4O96015 105 aa13.15□□□□□ -0.3
PKP3-201ENST00000331563 Q9UF83 564 aa13.15□□□□□ -0.3
PKP3-201ENST00000331563 UBE2D4Q9Y2X8 147 aa13.15□□□□□ -0.3
PKP3-201ENST00000331563 IGHV4-59P01825 116 aa13.15□□□□□ -0.3
PKP3-201ENST00000331563 IGHG2P01859 326 aa13.14□□□□□ -0.31
PKP3-201ENST00000331563 SNRPD3P62318 126 aaKnown RBP13.14□□□□□ -0.31
PKP3-201ENST00000331563 DEFB112Q30KQ8 113 aa13.14□□□□□ -0.31
PKP3-201ENST00000331563 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
PKP3-201ENST00000331563 C19orf54Q5BKX5 351 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 C10orf99Q6UWK7 81 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 FAM218AQ96MZ4 157 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 UNC79Q9P2D8 2635 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 USP17L23D6RBM5 183 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 COPS9Q8WXC6 57 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
PKP3-201ENST00000331563 CR1P17927 2039 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 A0A087WVE0 104 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 A0A096LNT2 108 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 BEAN1Q3B7T3 259 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 PRIMA1Q86XR5 153 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 FHL2Q14192 279 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 SOSTDC1Q6X4U4 206 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 CHCHD7Q9BUK0 85 aa13.12□□□□□ -0.31
PKP3-201ENST00000331563 A6NDX4 124 aa13.11□□□□□ -0.31
PKP3-201ENST00000331563 FAM222AQ5U5X8 452 aa13.11□□□□□ -0.31
PKP3-201ENST00000331563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
PKP3-201ENST00000331563 LINC01356Q8N9X3 169 aa13.11□□□□□ -0.31
PKP3-201ENST00000331563 NIPBLQ6KC79 2804 aaeCLIP13.11□□□□□ -0.312e-6■■■■□ 19.3
PKP3-201ENST00000331563 PKIGQ9Y2B9 76 aa13.1□□□□□ -0.31
PKP3-201ENST00000331563 PDZD2O15018 2839 aa13.1□□□□□ -0.31
PKP3-201ENST00000331563 NDUFC2-KCTD14E9PQ53 114 aa13.1□□□□□ -0.31
PKP3-201ENST00000331563 COX6A2Q02221 97 aa13.1□□□□□ -0.31
PKP3-201ENST00000331563 LINC01561Q8N1V8 128 aa13.1□□□□□ -0.31
PKP3-201ENST00000331563 Q6JHZ5 121 aa13.09□□□□□ -0.31
PKP3-201ENST00000331563 C14orf132Q9NPU4 83 aa13.09□□□□□ -0.31
PKP3-201ENST00000331563 NDUFC2O95298 119 aa13.08□□□□□ -0.31
PKP3-201ENST00000331563 PIK3CD-AS1Q5SR53 167 aa13.08□□□□□ -0.31
PKP3-201ENST00000331563 PRM2P04554 102 aa13.08□□□□□ -0.32
PKP3-201ENST00000331563 Q96MF0 132 aa13.08□□□□□ -0.32
PKP3-201ENST00000331563 WNK1Q9H4A3 2382 aa13.07□□□□□ -0.32
PKP3-201ENST00000331563 DSCR9P59020 149 aa13.07□□□□□ -0.32
PKP3-201ENST00000331563 HIST2H2BDQ6DRA6 164 aa13.07□□□□□ -0.32
PKP3-201ENST00000331563 Q6ZSN1 163 aa13.07□□□□□ -0.32
PKP3-201ENST00000331563 AKAP9Q99996 3911 aa13.07□□□□□ -0.32
PKP3-201ENST00000331563 DEFB113Q30KQ7 82 aa13.06□□□□□ -0.32
PKP3-201ENST00000331563 TMEM86BQ8N661 226 aa13.05□□□□□ -0.32
PKP3-201ENST00000331563 IGHV4-31P0DP07 118 aa13.05□□□□□ -0.32
PKP3-201ENST00000331563 SEC61GP60059 68 aa13.05□□□□□ -0.32
PKP3-201ENST00000331563 CRPP02741 224 aa13.04□□□□□ -0.32
PKP3-201ENST00000331563 H3BUA1 57 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 K7EMT4 169 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 PSMB8P28062 276 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 TMEM243Q9BU79 118 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 LINC00846Q9NV44 126 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 FAM236DA0A1B0GTK5 79 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 EPM2AB3EWF7 344 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 FAM236CP0DP71 79 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 ZNF415Q09FC8 603 aa13.03□□□□□ -0.32
PKP3-201ENST00000331563 IGHV3OR16-12A0A075B7B8 117 aa13.02□□□□□ -0.33
PKP3-201ENST00000331563 IGLV5-45A0A087WSX0 123 aa13.02□□□□□ -0.33
PKP3-201ENST00000331563 LINC00242Q5T6M2 205 aa13.02□□□□□ -0.33
PKP3-201ENST00000331563 C9orf129Q5T035 196 aaKnown RBP13.02□□□□□ -0.33
PKP3-201ENST00000331563 WFDC11Q8NEX6 87 aa13.02□□□□□ -0.33
PKP3-201ENST00000331563 IGLV5-39A0A0G2JS06 123 aa13.01□□□□□ -0.33
PKP3-201ENST00000331563 TRAV13-2A0A0B4J235 113 aa13.01□□□□□ -0.33
PKP3-201ENST00000331563 RBMY1A1P0DJD3 496 aaKnown RBP13.01□□□□□ -0.33
PKP3-201ENST00000331563 RBMY1CP0DJD4 496 aa13.01□□□□□ -0.33
PKP3-201ENST00000331563 RBMY1FQ15415 496 aaKnown RBP13.01□□□□□ -0.33
PKP3-201ENST00000331563 SERP1Q9Y6X1 66 aa13.01□□□□□ -0.33
PKP3-201ENST00000331563 SMIM1B2RUZ4 78 aa13□□□□□ -0.33
PKP3-201ENST00000331563 A0A087WYN8 130 aa13□□□□□ -0.33
PKP3-201ENST00000331563 K7EQG2 157 aa13□□□□□ -0.33
PKP3-201ENST00000331563 V9GYY9 64 aa12.98□□□□□ -0.33
PKP3-201ENST00000331563 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
PKP3-201ENST00000331563 RPL28P46779 137 aaKnown RBP12.98□□□□□ -0.33
PKP3-201ENST00000331563 NOTCH3Q9UM47 2321 aa12.97□□□□□ -0.33
PKP3-201ENST00000331563 PLA2G2AP14555 144 aa12.97□□□□□ -0.33
PKP3-201ENST00000331563 NCR3O14931 201 aa12.97□□□□□ -0.33
PKP3-201ENST00000331563 GHRHP01286 108 aa12.97□□□□□ -0.33
PKP3-201ENST00000331563 IGLV1-40P01703 118 aa12.97□□□□□ -0.33
PKP3-201ENST00000331563 OVOL2Q9BRP0 275 aa12.97□□□□□ -0.33
PKP3-201ENST00000331563 C2CD3Q4AC94 2353 aa12.97□□□□□ -0.33
PKP3-201ENST00000331563 C20orf197Q8N268 126 aa12.96□□□□□ -0.33
PKP3-201ENST00000331563 RBMY1BA6NDE4 496 aaKnown RBP12.96□□□□□ -0.34
PKP3-201ENST00000331563 RBMY1EA6NEQ0 496 aaKnown RBP12.96□□□□□ -0.34
PKP3-201ENST00000331563 RBMY1DP0C7P1 496 aaKnown RBP12.96□□□□□ -0.34
PKP3-201ENST00000331563 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
PKP3-201ENST00000331563 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
PKP3-201ENST00000331563 C16orf95Q9H693 158 aa12.95□□□□□ -0.34
PKP3-201ENST00000331563 LECT2O14960 151 aa12.94□□□□□ -0.34
PKP3-201ENST00000331563 PF4P02776 101 aa12.94□□□□□ -0.34
PKP3-201ENST00000331563 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
PKP3-201ENST00000331563 SMIM11BQ8TCY0 68 aa12.94□□□□□ -0.34
PKP3-201ENST00000331563 CFHR3Q02985 330 aa12.94□□□□□ -0.34
PKP3-201ENST00000331563 TOMM7Q9P0U1 55 aa12.94□□□□□ -0.34
PKP3-201ENST00000331563 J3QKU1 62 aa12.93□□□□□ -0.34
PKP3-201ENST00000331563 IGHV3-53P01767 116 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms