RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 F8WEM9 126 aa10.28□□□□□ -0.76
EPHB3-201ENST00000330394 EPG5Q9HCE0 2579 aa10.28□□□□□ -0.76
EPHB3-201ENST00000330394 F8P00451 2351 aa10.28□□□□□ -0.76
EPHB3-201ENST00000330394 TMEM258P61165 79 aa10.28□□□□□ -0.76
EPHB3-201ENST00000330394 REV3LO60673 3130 aa10.28□□□□□ -0.76
EPHB3-201ENST00000330394 SMIM11BQ8TCY0 68 aa10.27□□□□□ -0.76
EPHB3-201ENST00000330394 LOC107984640A0A0U1RRK4 108 aa10.27□□□□□ -0.77
EPHB3-201ENST00000330394 LOC100131303A0A0U1RQF7 123 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 SERP2Q8N6R1 65 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 BRK1Q8WUW1 75 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 SPAG11BQ08648 103 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 NREPQ16612 68 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 C5orf47Q569G3 176 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 LINC00242Q5T6M2 205 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 C6orf99Q4VX62 202 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
EPHB3-201ENST00000330394 TIMM17BO60830 172 aa10.25□□□□□ -0.77
EPHB3-201ENST00000330394 LINC00269Q8N2A0 174 aa10.25□□□□□ -0.77
EPHB3-201ENST00000330394 CAMK2N2Q96S95 79 aa10.25□□□□□ -0.77
EPHB3-201ENST00000330394 COX6A2Q02221 97 aa10.25□□□□□ -0.77
EPHB3-201ENST00000330394 LINC00526Q96FQ7 95 aa10.25□□□□□ -0.77
EPHB3-201ENST00000330394 FAM240AA0A1B0GVK7 77 aa10.24□□□□□ -0.77
EPHB3-201ENST00000330394 CXCL5P42830 114 aa10.24□□□□□ -0.77
EPHB3-201ENST00000330394 PKIGQ9Y2B9 76 aa10.24□□□□□ -0.77
EPHB3-201ENST00000330394 SNURFQ9Y675 71 aa10.24□□□□□ -0.77
EPHB3-201ENST00000330394 USP34Q70CQ2 3546 aa10.24□□□□□ -0.77
EPHB3-201ENST00000330394 DEFB114Q30KQ6 69 aa10.24□□□□□ -0.77
EPHB3-201ENST00000330394 PPDPFQ9H3Y8 114 aa10.24□□□□□ -0.77
EPHB3-201ENST00000330394 A0A1W2PPR1 153 aa10.23□□□□□ -0.77
EPHB3-201ENST00000330394 MPLKIPQ8TAP9 179 aa10.23□□□□□ -0.77
EPHB3-201ENST00000330394 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 FAM236DA0A1B0GTK5 79 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 FAM236CP0DP71 79 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 PCSK5Q92824 1860 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 XAGE1AQ9HD64 81 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 A0A0U1RQV1 116 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 DEFB135Q30KP9 77 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 IBA57-AS1B1ANH7 110 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 CCL18P55774 89 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
EPHB3-201ENST00000330394 WFDC10AQ9H1F0 79 aa10.21□□□□□ -0.77
EPHB3-201ENST00000330394 TMEM89A2RUT3 159 aa10.21□□□□□ -0.78
EPHB3-201ENST00000330394 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.78
EPHB3-201ENST00000330394 AVPP01185 164 aa10.21□□□□□ -0.78
EPHB3-201ENST00000330394 SPTBN5Q9NRC6 3674 aaKnown RBP10.2□□□□□ -0.78
EPHB3-201ENST00000330394 Q6ZSN1 163 aa10.2□□□□□ -0.78
EPHB3-201ENST00000330394 ANKRD17O75179 2603 aaKnown RBP10.2□□□□□ -0.78
EPHB3-201ENST00000330394 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
EPHB3-201ENST00000330394 CHCHD7Q9BUK0 85 aa10.19□□□□□ -0.78
EPHB3-201ENST00000330394 IGLV1-40P01703 118 aa10.19□□□□□ -0.78
EPHB3-201ENST00000330394 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 FHL3Q13643 280 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 FAM19A5Q7Z5A7 132 aaPredicted RBP10.18□□□□□ -0.78
EPHB3-201ENST00000330394 AMELXQ99217 191 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 FUSP35637 526 aaKnown RBP eCLIP10.18□□□□□ -0.78
EPHB3-201ENST00000330394 LINC00315P59091 139 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 PRR3P79522 188 aaKnown RBP10.18□□□□□ -0.78
EPHB3-201ENST00000330394 Q9UF83 564 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 PRO0255Q9UI72 69 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 A0A087WYN8 130 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 HIGD2BQ4VC39 106 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 C4orf3Q8WVX3 66 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 FAM110AQ9BQ89 295 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 CDC42SE2Q9NRR3 84 aa10.18□□□□□ -0.78
EPHB3-201ENST00000330394 CFAP47Q6ZTR5 3102 aa10.17□□□□□ -0.78
EPHB3-201ENST00000330394 Q6ZQY7 126 aa10.17□□□□□ -0.78
EPHB3-201ENST00000330394 Q8N2B8 174 aa10.16□□□□□ -0.78
EPHB3-201ENST00000330394 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
EPHB3-201ENST00000330394 LRRC75A-AS1Q8N1F1 130 aa10.16□□□□□ -0.78
EPHB3-201ENST00000330394 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
EPHB3-201ENST00000330394 COL4A2P08572 1712 aa10.16□□□□□ -0.78
EPHB3-201ENST00000330394 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
EPHB3-201ENST00000330394 UBE2BP63146 152 aa10.16□□□□□ -0.78
EPHB3-201ENST00000330394 FAM222AQ5U5X8 452 aa10.15□□□□□ -0.78
EPHB3-201ENST00000330394 APOC4P55056 127 aa10.15□□□□□ -0.78
EPHB3-201ENST00000330394 REG3AQ06141 175 aa10.15□□□□□ -0.78
EPHB3-201ENST00000330394 USP24Q9UPU5 2620 aa10.15□□□□□ -0.79
EPHB3-201ENST00000330394 ETDCA0A1B0GVM5 59 aa10.14□□□□□ -0.79
EPHB3-201ENST00000330394 PSCAO43653 123 aa10.14□□□□□ -0.79
EPHB3-201ENST00000330394 LINC00846Q9NV44 126 aa10.13□□□□□ -0.79
EPHB3-201ENST00000330394 COX7BP24311 80 aa10.13□□□□□ -0.79
EPHB3-201ENST00000330394 BPY2O14599 106 aa10.12□□□□□ -0.79
EPHB3-201ENST00000330394 DEFB113Q30KQ7 82 aa10.12□□□□□ -0.79
EPHB3-201ENST00000330394 DEFB121Q5J5C9 76 aa10.12□□□□□ -0.79
EPHB3-201ENST00000330394 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
EPHB3-201ENST00000330394 ADGRG4Q8IZF6 3080 aa10.12□□□□□ -0.79
EPHB3-201ENST00000330394 Q6JHZ5 121 aa10.12□□□□□ -0.79
EPHB3-201ENST00000330394 IGLV4-60A0A075B6I1 120 aa10.11□□□□□ -0.79
EPHB3-201ENST00000330394 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
EPHB3-201ENST00000330394 NDUFC2O95298 119 aa10.11□□□□□ -0.79
EPHB3-201ENST00000330394 RPL28P46779 137 aaKnown RBP10.11□□□□□ -0.79
EPHB3-201ENST00000330394 C9orf116Q5BN46 136 aaPredicted RBP10.11□□□□□ -0.79
EPHB3-201ENST00000330394 FAM19A1Q7Z5A9 133 aa10.11□□□□□ -0.79
EPHB3-201ENST00000330394 SPART-AS1P0CW21 52 aa10.11□□□□□ -0.79
EPHB3-201ENST00000330394 ATP5EP2Q5VTU8 51 aa10.11□□□□□ -0.79
EPHB3-201ENST00000330394 Q6YL49 198 aa10.1□□□□□ -0.79
EPHB3-201ENST00000330394 BBC3Q96PG8 261 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms