RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 COX6CP09669 75 aa12.42□□□□□ -0.42
PTP4A3-201ENST00000329397 PLA2G2AP14555 144 aa12.42□□□□□ -0.42
PTP4A3-201ENST00000329397 SOSTDC1Q6X4U4 206 aa12.42□□□□□ -0.42
PTP4A3-201ENST00000329397 NBEAL2Q6ZNJ1 2754 aa12.42□□□□□ -0.42
PTP4A3-201ENST00000329397 NDUFA1O15239 70 aa12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 Q8N2B8 174 aa12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 HRCT1Q6UXD1 115 aa12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 GCN1Q92616 2671 aaKnown RBP12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 IGKV3OR2-268A0A0C4DH90 116 aa12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 SNCGO76070 127 aa12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 C4orf26Q17RF5 130 aa12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 LINC00308Q8TCZ7 52 aa12.41□□□□□ -0.42
PTP4A3-201ENST00000329397 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
PTP4A3-201ENST00000329397 NOP10Q9NPE3 64 aaKnown RBP12.4□□□□□ -0.42
PTP4A3-201ENST00000329397 SMIM1B2RUZ4 78 aa12.4□□□□□ -0.43
PTP4A3-201ENST00000329397 LST1O00453 97 aa12.4□□□□□ -0.43
PTP4A3-201ENST00000329397 IGLV5-45A0A087WSX0 123 aa12.39□□□□□ -0.43
PTP4A3-201ENST00000329397 TIRAPP58753 221 aa12.39□□□□□ -0.43
PTP4A3-201ENST00000329397 PIK3CD-AS1Q5SR53 167 aa12.39□□□□□ -0.43
PTP4A3-201ENST00000329397 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
PTP4A3-201ENST00000329397 C15orf53Q8NAA6 179 aa12.39□□□□□ -0.43
PTP4A3-201ENST00000329397 KLK5Q9Y337 293 aaPredicted RBP12.38□□□□□ -0.43
PTP4A3-201ENST00000329397 HERVK_113P63121 156 aa12.37□□□□□ -0.43
PTP4A3-201ENST00000329397 C1orf43Q9BWL3 253 aa12.37□□□□□ -0.43
PTP4A3-201ENST00000329397 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
PTP4A3-201ENST00000329397 K7EQD1 137 aa12.37□□□□□ -0.43
PTP4A3-201ENST00000329397 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
PTP4A3-201ENST00000329397 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
PTP4A3-201ENST00000329397 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
PTP4A3-201ENST00000329397 DEFB113Q30KQ7 82 aa12.36□□□□□ -0.43
PTP4A3-201ENST00000329397 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
PTP4A3-201ENST00000329397 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
PTP4A3-201ENST00000329397 CHCHD5Q9BSY4 110 aa12.35□□□□□ -0.43
PTP4A3-201ENST00000329397 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
PTP4A3-201ENST00000329397 TIMM17BO60830 172 aa12.35□□□□□ -0.43
PTP4A3-201ENST00000329397 A0A1B0GX51 115 aa12.34□□□□□ -0.43
PTP4A3-201ENST00000329397 PKIGQ9Y2B9 76 aa12.34□□□□□ -0.43
PTP4A3-201ENST00000329397 CCL24O00175 119 aa12.34□□□□□ -0.43
PTP4A3-201ENST00000329397 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
PTP4A3-201ENST00000329397 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
PTP4A3-201ENST00000329397 DNAJC9-AS1A6NH13 148 aa12.33□□□□□ -0.44
PTP4A3-201ENST00000329397 H3BT86 120 aa12.33□□□□□ -0.44
PTP4A3-201ENST00000329397 Q6Q795 121 aa12.33□□□□□ -0.44
PTP4A3-201ENST00000329397 ESM1Q9NQ30 184 aa12.33□□□□□ -0.44
PTP4A3-201ENST00000329397 TOMM7Q9P0U1 55 aa12.33□□□□□ -0.44
PTP4A3-201ENST00000329397 ITPR2Q14571 2701 aa12.32□□□□□ -0.44
PTP4A3-201ENST00000329397 WFDC11Q8NEX6 87 aa12.32□□□□□ -0.44
PTP4A3-201ENST00000329397 TRGV2A0A075B6R0 118 aa12.31□□□□□ -0.44
PTP4A3-201ENST00000329397 GIG44P09565 113 aaPredicted RBP12.31□□□□□ -0.44
PTP4A3-201ENST00000329397 KRTAP1-3Q8IUG1 177 aa12.31□□□□□ -0.44
PTP4A3-201ENST00000329397 UBE2L6O14933 153 aa12.3□□□□□ -0.44
PTP4A3-201ENST00000329397 FAM218AQ96MZ4 157 aa12.3□□□□□ -0.44
PTP4A3-201ENST00000329397 V9GYY9 64 aa12.3□□□□□ -0.44
PTP4A3-201ENST00000329397 FAM236AA0A1B0GUQ0 79 aa12.29□□□□□ -0.44
PTP4A3-201ENST00000329397 FAM236BA0A1B0GV22 79 aa12.29□□□□□ -0.44
PTP4A3-201ENST00000329397 DAZ2Q13117 558 aaKnown RBP12.29□□□□□ -0.44
PTP4A3-201ENST00000329397 C9orf153Q5TBE3 101 aa12.29□□□□□ -0.44
PTP4A3-201ENST00000329397 DAZ4Q86SG3 579 aaKnown RBP12.29□□□□□ -0.44
PTP4A3-201ENST00000329397 LINC01600Q96MT4 127 aa12.29□□□□□ -0.44
PTP4A3-201ENST00000329397 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
PTP4A3-201ENST00000329397 ZNF843Q8N446 348 aa12.28□□□□□ -0.44
PTP4A3-201ENST00000329397 COX7A2LO14548 114 aa12.28□□□□□ -0.44
PTP4A3-201ENST00000329397 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
PTP4A3-201ENST00000329397 PLAC8L1A1L4L8 177 aa12.27□□□□□ -0.44
PTP4A3-201ENST00000329397 RPS28P62857 69 aaKnown RBP12.27□□□□□ -0.44
PTP4A3-201ENST00000329397 IGLV4-60A0A075B6I1 120 aa12.27□□□□□ -0.45
PTP4A3-201ENST00000329397 TRBV10-1A0A0K0K1A3 114 aa12.27□□□□□ -0.45
PTP4A3-201ENST00000329397 Q9HAA7 133 aa12.27□□□□□ -0.45
PTP4A3-201ENST00000329397 HIVEP2P31629 2446 aa12.26□□□□□ -0.45
PTP4A3-201ENST00000329397 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
PTP4A3-201ENST00000329397 MIR7-3HGQ8N6C7 128 aa12.25□□□□□ -0.45
PTP4A3-201ENST00000329397 PRO0628Q9UI54 55 aa12.25□□□□□ -0.45
PTP4A3-201ENST00000329397 VWFP04275 2813 aa12.25□□□□□ -0.45
PTP4A3-201ENST00000329397 MALP21145 153 aa12.24□□□□□ -0.45
PTP4A3-201ENST00000329397 Q5XG85 94 aa12.24□□□□□ -0.45
PTP4A3-201ENST00000329397 TRGV4A0A0C4DH28 118 aa12.24□□□□□ -0.45
PTP4A3-201ENST00000329397 LINC00337Q8N6G1 96 aa12.23□□□□□ -0.45
PTP4A3-201ENST00000329397 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
PTP4A3-201ENST00000329397 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
PTP4A3-201ENST00000329397 SMCR5Q8TEV8 140 aa12.22□□□□□ -0.45
PTP4A3-201ENST00000329397 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.45
PTP4A3-201ENST00000329397 PFN2P35080 140 aa12.21□□□□□ -0.45
PTP4A3-201ENST00000329397 LINC00158P58513 81 aa12.21□□□□□ -0.46
PTP4A3-201ENST00000329397 COX7B2Q8TF08 81 aa12.21□□□□□ -0.46
PTP4A3-201ENST00000329397 IGKV2-28A0A075B6P5 120 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 OXTP01178 125 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 IGKV2D-28P01615 120 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 C22orf24Q9Y442 160 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 LINC01006Q8NI28 216 aa12.2□□□□□ -0.46
PTP4A3-201ENST00000329397 CLPSL2Q6UWE3 100 aa12.19□□□□□ -0.46
PTP4A3-201ENST00000329397 C3orf22Q8N5N4 141 aa12.19□□□□□ -0.46
PTP4A3-201ENST00000329397 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
PTP4A3-201ENST00000329397 ANK3Q12955 4377 aaKnown RBP12.19□□□□□ -0.46
PTP4A3-201ENST00000329397 TMEM86BQ8N661 226 aa12.18□□□□□ -0.46
PTP4A3-201ENST00000329397 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
PTP4A3-201ENST00000329397 HELZ2Q9BYK8 2649 aaKnown RBP12.18□□□□□ -0.46
PTP4A3-201ENST00000329397 A0A096LPF7 62 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms