RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 K7EP13 123 aa6.92□□□□□ -1.3
VIPAS39-201ENST00000327028 SS18Q15532 418 aa6.92□□□□□ -1.3
VIPAS39-201ENST00000327028 ENHOQ6UWT2 76 aa6.92□□□□□ -1.3
VIPAS39-201ENST00000327028 C10orf126Q8N4M7 172 aa6.92□□□□□ -1.3
VIPAS39-201ENST00000327028 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
VIPAS39-201ENST00000327028 EREGO14944 169 aa6.91□□□□□ -1.3
VIPAS39-201ENST00000327028 HERVK_113P63121 156 aa6.91□□□□□ -1.3
VIPAS39-201ENST00000327028 ATOH7Q8N100 152 aa6.91□□□□□ -1.3
VIPAS39-201ENST00000327028 UBE2WQ96B02 151 aa6.91□□□□□ -1.3
VIPAS39-201ENST00000327028 TRAV9-2A0A087WT02 112 aa6.91□□□□□ -1.3
VIPAS39-201ENST00000327028 GEMIN7Q9H840 131 aaKnown RBP6.91□□□□□ -1.3
VIPAS39-201ENST00000327028 DNAH1Q9P2D7 4330 aa6.9□□□□□ -1.3
VIPAS39-201ENST00000327028 IGLV5-45A0A087WSX0 123 aa6.9□□□□□ -1.3
VIPAS39-201ENST00000327028 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.3
VIPAS39-201ENST00000327028 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
VIPAS39-201ENST00000327028 MIAQ16674 131 aa6.9□□□□□ -1.3
VIPAS39-201ENST00000327028 TRAV8-4A0A0B4J246 113 aa6.9□□□□□ -1.31
VIPAS39-201ENST00000327028 COX6A2Q02221 97 aa6.89□□□□□ -1.31
VIPAS39-201ENST00000327028 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
VIPAS39-201ENST00000327028 LYSTQ99698 3801 aa6.89□□□□□ -1.31
VIPAS39-201ENST00000327028 DLEU1O43261 78 aa6.89□□□□□ -1.31
VIPAS39-201ENST00000327028 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
VIPAS39-201ENST00000327028 IGLV10-54A0A075B6I4 117 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 XCL1P47992 114 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 TMEM170BQ5T4T1 132 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 TRAV8-3A0A0A6YYJ7 113 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 hDV102S1A0JD36 115 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 LINC00476Q8WZB0 136 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 VAMP8Q9BV40 100 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
VIPAS39-201ENST00000327028 IGHV3OR16-9A0A0B4J2B5 98 aa6.87□□□□□ -1.31
VIPAS39-201ENST00000327028 NBDYA0A0U1RRE5 68 aa6.87□□□□□ -1.31
VIPAS39-201ENST00000327028 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
VIPAS39-201ENST00000327028 H3BRM9 83 aa6.87□□□□□ -1.31
VIPAS39-201ENST00000327028 TMEM223A0PJW6 202 aa6.87□□□□□ -1.31
VIPAS39-201ENST00000327028 STPG4Q8N801 248 aa6.87□□□□□ -1.31
VIPAS39-201ENST00000327028 Q9HAA7 133 aa6.87□□□□□ -1.31
VIPAS39-201ENST00000327028 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 HERVK_113P61574 105 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 FOXI1Q12951 378 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 RMI2Q96E14 147 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 A0A087WZ39 114 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 KRTAP26-1Q6PEX3 210 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 SNHG12Q9BXW3 62 aa6.86□□□□□ -1.31
VIPAS39-201ENST00000327028 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
VIPAS39-201ENST00000327028 IGKV2D-24A0A075B6R9 120 aa6.85□□□□□ -1.31
VIPAS39-201ENST00000327028 COX7A2LO14548 114 aa6.85□□□□□ -1.31
VIPAS39-201ENST00000327028 LY6G6CO95867 125 aa6.85□□□□□ -1.31
VIPAS39-201ENST00000327028 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
VIPAS39-201ENST00000327028 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
VIPAS39-201ENST00000327028 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
VIPAS39-201ENST00000327028 E9PLD3 99 aa6.84□□□□□ -1.31
VIPAS39-201ENST00000327028 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
VIPAS39-201ENST00000327028 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
VIPAS39-201ENST00000327028 IGLV5-39A0A0G2JS06 123 aa6.84□□□□□ -1.31
VIPAS39-201ENST00000327028 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
VIPAS39-201ENST00000327028 LEPROTO15243 131 aa6.83□□□□□ -1.32
VIPAS39-201ENST00000327028 COX11Q9Y6N1 276 aa6.83□□□□□ -1.32
VIPAS39-201ENST00000327028 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
VIPAS39-201ENST00000327028 IGKV2D-26A0A0A0MRZ7 120 aa6.82□□□□□ -1.32
VIPAS39-201ENST00000327028 MALP21145 153 aa6.82□□□□□ -1.32
VIPAS39-201ENST00000327028 Q6ZR54 194 aa6.82□□□□□ -1.32
VIPAS39-201ENST00000327028 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
VIPAS39-201ENST00000327028 TM2D2Q9BX73 214 aa6.82□□□□□ -1.32
VIPAS39-201ENST00000327028 M0R143 59 aa6.82□□□□□ -1.32
VIPAS39-201ENST00000327028 NMUP48645 174 aa6.81□□□□□ -1.32
VIPAS39-201ENST00000327028 APOMO95445 188 aa6.81□□□□□ -1.32
VIPAS39-201ENST00000327028 TSPEAR-AS2P59090 65 aa6.81□□□□□ -1.32
VIPAS39-201ENST00000327028 J3QQQ9 107 aa6.8□□□□□ -1.32
VIPAS39-201ENST00000327028 M0R2N4 97 aa6.8□□□□□ -1.32
VIPAS39-201ENST00000327028 ORAOV1Q8WV07 137 aa6.8□□□□□ -1.32
VIPAS39-201ENST00000327028 LGALS3P17931 250 aaKnown RBP6.8□□□□□ -1.32
VIPAS39-201ENST00000327028 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
VIPAS39-201ENST00000327028 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
VIPAS39-201ENST00000327028 COX8AP10176 69 aa6.79□□□□□ -1.32
VIPAS39-201ENST00000327028 Q6ZRN7 208 aaPredicted RBP6.79□□□□□ -1.32
VIPAS39-201ENST00000327028 PCP2Q8IVA1 136 aa6.79□□□□□ -1.32
VIPAS39-201ENST00000327028 Q8IZM0 81 aa6.79□□□□□ -1.32
VIPAS39-201ENST00000327028 MAPKAPK5-AS1Q8N8E1 139 aa6.79□□□□□ -1.32
VIPAS39-201ENST00000327028 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
VIPAS39-201ENST00000327028 C6orf223Q8N319 242 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 TOMM7Q9P0U1 55 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 LCE6AA0A183 80 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 PSCAO43653 123 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 PRSS2P07478 247 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
VIPAS39-201ENST00000327028 GVQW2A0A096LPI5 108 aaPredicted RBP6.77□□□□□ -1.33
VIPAS39-201ENST00000327028 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
VIPAS39-201ENST00000327028 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
VIPAS39-201ENST00000327028 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
VIPAS39-201ENST00000327028 MYMXA0A1B0GTQ4 84 aa6.77□□□□□ -1.33
VIPAS39-201ENST00000327028 ZNF815PA8K554 130 aa6.77□□□□□ -1.33
VIPAS39-201ENST00000327028 NDUFA1O15239 70 aa6.77□□□□□ -1.33
VIPAS39-201ENST00000327028 SLC25A34Q6PIV7 304 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms