RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
CUL4A-201ENST00000326335 LINC00158P58513 81 aa7.54□□□□□ -1.2
CUL4A-201ENST00000326335 PLAC8L1A1L4L8 177 aa7.53□□□□□ -1.2
CUL4A-201ENST00000326335 UBE2D1P51668 147 aa7.53□□□□□ -1.2
CUL4A-201ENST00000326335 RPL32P62910 135 aaKnown RBP7.53□□□□□ -1.2
CUL4A-201ENST00000326335 SPANXA1Q9NS26 97 aa7.53□□□□□ -1.2
CUL4A-201ENST00000326335 STAB2Q8WWQ8 2551 aa7.53□□□□□ -1.2
CUL4A-201ENST00000326335 MRPS36P82909 103 aaKnown RBP7.53□□□□□ -1.2
CUL4A-201ENST00000326335 TAL2Q16559 108 aa7.53□□□□□ -1.2
CUL4A-201ENST00000326335 BEAN1Q3B7T3 259 aa7.53□□□□□ -1.2
CUL4A-201ENST00000326335 TRAV26-1A0A087WT03 109 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
CUL4A-201ENST00000326335 UBE2D3P61077 147 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 UBE2D2P62837 147 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 C2orf82Q6UX34 121 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 PAX4O43316 350 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 MRAPQ8TCY5 172 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 CELA1Q9UNI1 258 aa7.52□□□□□ -1.21
CUL4A-201ENST00000326335 FHL2Q14192 279 aa7.51□□□□□ -1.21
CUL4A-201ENST00000326335 ANGP03950 147 aaKnown RBP7.51□□□□□ -1.21
CUL4A-201ENST00000326335 DAD1P61803 113 aa7.51□□□□□ -1.21
CUL4A-201ENST00000326335 ATP6V0E2Q8NHE4 81 aa7.5□□□□□ -1.21
CUL4A-201ENST00000326335 CDC42SE2Q9NRR3 84 aa7.5□□□□□ -1.21
CUL4A-201ENST00000326335 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
CUL4A-201ENST00000326335 TRIAP1O43715 76 aa7.5□□□□□ -1.21
CUL4A-201ENST00000326335 CSNK1G2-AS1Q8NCQ2 148 aa7.5□□□□□ -1.21
CUL4A-201ENST00000326335 DAZ2Q13117 558 aaKnown RBP7.5□□□□□ -1.21
CUL4A-201ENST00000326335 CIRBPQ14011 172 aaKnown RBP7.5□□□□□ -1.21
CUL4A-201ENST00000326335 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
CUL4A-201ENST00000326335 C16orf95Q9H693 158 aa7.5□□□□□ -1.21
CUL4A-201ENST00000326335 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
CUL4A-201ENST00000326335 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
CUL4A-201ENST00000326335 PYGO1Q9Y3Y4 419 aa7.5□□□□□ -1.21
CUL4A-201ENST00000326335 IGHV4-28A0A0C4DH34 117 aa7.49□□□□□ -1.21
CUL4A-201ENST00000326335 IGHV3-33P01772 117 aa7.49□□□□□ -1.21
CUL4A-201ENST00000326335 SMCPP49901 116 aaPredicted RBP7.49□□□□□ -1.21
CUL4A-201ENST00000326335 C6orf226Q5I0X4 101 aa7.49□□□□□ -1.21
CUL4A-201ENST00000326335 LINC00269Q8N2A0 174 aa7.49□□□□□ -1.21
CUL4A-201ENST00000326335 A8MTW9 85 aa7.49□□□□□ -1.21
CUL4A-201ENST00000326335 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
CUL4A-201ENST00000326335 TRBV6-8A0A0A6YYG3 113 aa7.48□□□□□ -1.21
CUL4A-201ENST00000326335 G3V4G9 280 aa7.48□□□□□ -1.21
CUL4A-201ENST00000326335 HERVK_113P63121 156 aa7.48□□□□□ -1.21
CUL4A-201ENST00000326335 PRR3P79522 188 aaKnown RBP7.48□□□□□ -1.21
CUL4A-201ENST00000326335 NTN5Q8WTR8 489 aaPredicted RBP7.48□□□□□ -1.21
CUL4A-201ENST00000326335 C9orf116Q5BN46 136 aaPredicted RBP7.48□□□□□ -1.21
CUL4A-201ENST00000326335 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
CUL4A-201ENST00000326335 ANKRD29Q8N6D5 301 aa7.48□□□□□ -1.21
CUL4A-201ENST00000326335 F8W1H4 67 aa7.47□□□□□ -1.21
CUL4A-201ENST00000326335 SLC25A20O43772 301 aa7.47□□□□□ -1.21
CUL4A-201ENST00000326335 IGHV4-30-4P0DP06 118 aa7.47□□□□□ -1.21
CUL4A-201ENST00000326335 C3orf56Q8N813 242 aa7.47□□□□□ -1.21
CUL4A-201ENST00000326335 X6R8D5 127 aa7.47□□□□□ -1.21
CUL4A-201ENST00000326335 TEX49A0A1B0GTD5 131 aa7.46□□□□□ -1.22
CUL4A-201ENST00000326335 C9orf66Q5T8R8 295 aa7.46□□□□□ -1.22
CUL4A-201ENST00000326335 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
CUL4A-201ENST00000326335 Q9HAA7 133 aa7.46□□□□□ -1.22
CUL4A-201ENST00000326335 CSMD3Q7Z407 3707 aa7.46□□□□□ -1.22
CUL4A-201ENST00000326335 TRBV10-1A0A0K0K1A3 114 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 MIAQ16674 131 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 ZFAND6Q6FIF0 208 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 LITAFQ99732 161 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 ICOSQ9Y6W8 199 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 J3QR89 54 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 CLUHP3Q96NS8 147 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 KLK12Q9UKR0 248 aa7.45□□□□□ -1.22
CUL4A-201ENST00000326335 GAGE12HA6NDE8 117 aa7.44□□□□□ -1.22
CUL4A-201ENST00000326335 ATP5G1P05496 136 aa7.44□□□□□ -1.22
CUL4A-201ENST00000326335 LINC00308Q8TCZ7 52 aa7.44□□□□□ -1.22
CUL4A-201ENST00000326335 MALP21145 153 aa7.44□□□□□ -1.22
CUL4A-201ENST00000326335 DEFB121Q5J5C9 76 aa7.44□□□□□ -1.22
CUL4A-201ENST00000326335 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.44□□□□□ -1.22
CUL4A-201ENST00000326335 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
CUL4A-201ENST00000326335 COX7B2Q8TF08 81 aa7.43□□□□□ -1.22
CUL4A-201ENST00000326335 PRO0255Q9UI72 69 aa7.43□□□□□ -1.22
CUL4A-201ENST00000326335 COX6CP09669 75 aa7.43□□□□□ -1.22
CUL4A-201ENST00000326335 CMC4P56277 68 aaPredicted RBP7.43□□□□□ -1.22
CUL4A-201ENST00000326335 PRO0461Q9UI25 63 aa7.43□□□□□ -1.22
CUL4A-201ENST00000326335 LYRM7Q5U5X0 104 aa7.43□□□□□ -1.22
CUL4A-201ENST00000326335 IL17DQ8TAD2 202 aa7.43□□□□□ -1.22
CUL4A-201ENST00000326335 CRYBA4P53673 196 aa7.42□□□□□ -1.22
CUL4A-201ENST00000326335 FOXI1Q12951 378 aa7.42□□□□□ -1.22
CUL4A-201ENST00000326335 UBE2WQ96B02 151 aa7.42□□□□□ -1.22
CUL4A-201ENST00000326335 CKS1BP61024 79 aa7.41□□□□□ -1.22
CUL4A-201ENST00000326335 C6orf223Q8N319 242 aa7.41□□□□□ -1.22
CUL4A-201ENST00000326335 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
CUL4A-201ENST00000326335 LINC00959A0A1B0GUT2 108 aa7.41□□□□□ -1.22
CUL4A-201ENST00000326335 LINC01620Q4KN68 170 aa7.41□□□□□ -1.22
CUL4A-201ENST00000326335 NDUFA1O15239 70 aa7.41□□□□□ -1.22
CUL4A-201ENST00000326335 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
CUL4A-201ENST00000326335 CYSRT1A8MQ03 144 aa7.4□□□□□ -1.22
CUL4A-201ENST00000326335 SLPIP03973 132 aa7.4□□□□□ -1.22
CUL4A-201ENST00000326335 APOC4P55056 127 aa7.4□□□□□ -1.23
CUL4A-201ENST00000326335 TIRAPP58753 221 aa7.4□□□□□ -1.23
CUL4A-201ENST00000326335 SS18Q15532 418 aa7.4□□□□□ -1.23
CUL4A-201ENST00000326335 ATXN8Q156A1 80 aa7.4□□□□□ -1.23
CUL4A-201ENST00000326335 SIGMAR1Q99720 223 aa7.39□□□□□ -1.23
CUL4A-201ENST00000326335 OVOL2Q9BRP0 275 aa7.39□□□□□ -1.23
CUL4A-201ENST00000326335 ANK2Q01484 3957 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms