RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 WIPF1O43516 503 aa7.32□□□□□ -1.24
COL12A1-201ENST00000322507 NEXN-AS1Q8NBZ9 246 aa7.32□□□□□ -1.24
COL12A1-201ENST00000322507 RNASE3P12724 160 aaKnown RBP7.32□□□□□ -1.24
COL12A1-201ENST00000322507 A0A0J9YY99 117 aa7.32□□□□□ -1.24
COL12A1-201ENST00000322507 WFDC13Q8IUB5 93 aa7.32□□□□□ -1.24
COL12A1-201ENST00000322507 H3BS24 57 aa7.31□□□□□ -1.24
COL12A1-201ENST00000322507 H0Y9P7 68 aa7.31□□□□□ -1.24
COL12A1-201ENST00000322507 CEP295Q9C0D2 2601 aa7.3□□□□□ -1.24
COL12A1-201ENST00000322507 C2orf91Q6ZV80 131 aa7.3□□□□□ -1.24
COL12A1-201ENST00000322507 C22orf34Q6ZV56 151 aa7.3□□□□□ -1.24
COL12A1-201ENST00000322507 P0C879 139 aa7.3□□□□□ -1.24
COL12A1-201ENST00000322507 TNFRSF13BO14836 293 aaPredicted RBP7.3□□□□□ -1.24
COL12A1-201ENST00000322507 PATE2Q6UY27 113 aa7.3□□□□□ -1.24
COL12A1-201ENST00000322507 RPL39P62891 51 aaKnown RBP7.29□□□□□ -1.24
COL12A1-201ENST00000322507 ZFAND2AQ8N6M9 145 aa7.29□□□□□ -1.24
COL12A1-201ENST00000322507 H3BPC8 53 aa7.29□□□□□ -1.24
COL12A1-201ENST00000322507 PRR15Q8IV56 129 aa7.29□□□□□ -1.24
COL12A1-201ENST00000322507 A0A096LPF7 62 aa7.29□□□□□ -1.24
COL12A1-201ENST00000322507 F8W735 103 aaPredicted RBP7.29□□□□□ -1.24
COL12A1-201ENST00000322507 Q8N3U1 123 aa7.29□□□□□ -1.24
COL12A1-201ENST00000322507 MTORP42345 2549 aa7.29□□□□□ -1.24
COL12A1-201ENST00000322507 SRCAPQ6ZRS2 3230 aa7.29□□□□□ -1.24
COL12A1-201ENST00000322507 DEFB136Q30KP8 78 aa7.28□□□□□ -1.24
COL12A1-201ENST00000322507 LINC01548A6NM66 108 aa7.28□□□□□ -1.24
COL12A1-201ENST00000322507 IGLV2-14P01704 120 aa7.28□□□□□ -1.24
COL12A1-201ENST00000322507 ODF3L1Q8IXM7 274 aa7.28□□□□□ -1.24
COL12A1-201ENST00000322507 MUC22E2RYF6 1773 aaPredicted RBP7.28□□□□□ -1.24
COL12A1-201ENST00000322507 MRGPRG-AS1Q2M3A8 158 aa7.28□□□□□ -1.24
COL12A1-201ENST00000322507 IGLV10-54A0A075B6I4 117 aa7.27□□□□□ -1.24
COL12A1-201ENST00000322507 ODF3BA8MYP8 253 aa7.27□□□□□ -1.25
COL12A1-201ENST00000322507 ACYP2P14621 99 aa7.27□□□□□ -1.25
COL12A1-201ENST00000322507 TP53AIP1Q9HCN2 124 aa7.27□□□□□ -1.25
COL12A1-201ENST00000322507 U3KQK5 164 aa7.27□□□□□ -1.25
COL12A1-201ENST00000322507 C11orf1Q9H5F2 150 aa7.27□□□□□ -1.25
COL12A1-201ENST00000322507 MAPK1IP1LQ8NDC0 245 aa7.26□□□□□ -1.25
COL12A1-201ENST00000322507 ELOF1P60002 83 aaKnown RBP7.26□□□□□ -1.25
COL12A1-201ENST00000322507 NTM-AS1Q6ZSK4 140 aa7.26□□□□□ -1.25
COL12A1-201ENST00000322507 TRBV6-4A0A1B0GX49 114 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 MAP6D1Q9H9H5 199 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 IGHV4-30-4P0DP06 118 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 IGHV4-31P0DP07 118 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 LINC01554Q52M75 96 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 C11orf45Q8TAV5 145 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 TTTY13Q9BZ97 58 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 REG3AQ06141 175 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 MSRB1Q9NZV6 116 aa7.25□□□□□ -1.25
COL12A1-201ENST00000322507 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
COL12A1-201ENST00000322507 A6NDX4 124 aa7.24□□□□□ -1.25
COL12A1-201ENST00000322507 LINC00474Q9P2X8 69 aa7.24□□□□□ -1.25
COL12A1-201ENST00000322507 A0A087WVE0 104 aa7.24□□□□□ -1.25
COL12A1-201ENST00000322507 A0A1B0GW54 56 aa7.24□□□□□ -1.25
COL12A1-201ENST00000322507 DEFB135Q30KP9 77 aa7.24□□□□□ -1.25
COL12A1-201ENST00000322507 C10orf25Q5T742 122 aa7.23□□□□□ -1.25
COL12A1-201ENST00000322507 SLPIP03973 132 aa7.23□□□□□ -1.25
COL12A1-201ENST00000322507 NHLRC4P0CG21 123 aaPredicted RBP7.23□□□□□ -1.25
COL12A1-201ENST00000322507 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
COL12A1-201ENST00000322507 ZNF80P51504 273 aaPredicted RBP7.22□□□□□ -1.25
COL12A1-201ENST00000322507 Q8N7P7 452 aa7.22□□□□□ -1.25
COL12A1-201ENST00000322507 AVPP01185 164 aa7.22□□□□□ -1.25
COL12A1-201ENST00000322507 RITA1Q96K30 269 aa7.22□□□□□ -1.25
COL12A1-201ENST00000322507 A0A087WZ39 114 aa7.22□□□□□ -1.25
COL12A1-201ENST00000322507 DNAJC9-AS1A6NH13 148 aa7.22□□□□□ -1.25
COL12A1-201ENST00000322507 SSBP3-AS1Q7Z2R9 100 aa7.22□□□□□ -1.25
COL12A1-201ENST00000322507 IGKV1D-37A0A075B6S9 117 aa7.22□□□□□ -1.25
COL12A1-201ENST00000322507 PRRC2CQ9Y520 2896 aaKnown RBP7.21□□□□□ -1.25
COL12A1-201ENST00000322507 K7EQG2 157 aa7.21□□□□□ -1.26
COL12A1-201ENST00000322507 ADORA2A-AS1P86434 159 aa7.21□□□□□ -1.26
COL12A1-201ENST00000322507 PCSK5Q92824 1860 aa7.21□□□□□ -1.26
COL12A1-201ENST00000322507 CNFNQ9BYD5 112 aa7.21□□□□□ -1.26
COL12A1-201ENST00000322507 TRAV10A0A0B4J240 114 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 PRAC2D3DTV9 90 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 M0R378 163 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 UQCR11O14957 56 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 Q8N814 137 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 C1orf64Q8NEQ6 169 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 ZFP36P26651 326 aaKnown RBP7.2□□□□□ -1.26
COL12A1-201ENST00000322507 Q6YL49 198 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 CDIP1Q9H305 208 aa7.2□□□□□ -1.26
COL12A1-201ENST00000322507 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
COL12A1-201ENST00000322507 C9orf116Q5BN46 136 aaPredicted RBP7.19□□□□□ -1.26
COL12A1-201ENST00000322507 M0QY20 66 aa7.19□□□□□ -1.26
COL12A1-201ENST00000322507 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
COL12A1-201ENST00000322507 CHD8Q9HCK8 2581 aa7.19□□□□□ -1.26
COL12A1-201ENST00000322507 PLA2G1BP04054 148 aaKnown RBP7.19□□□□□ -1.26
COL12A1-201ENST00000322507 ZNF22P17026 224 aaPredicted RBP7.19□□□□□ -1.26
COL12A1-201ENST00000322507 MBD6Q96DN6 1003 aa7.19□□□□□ -1.26
COL12A1-201ENST00000322507 LINC01547P58512 204 aaPredicted RBP7.18□□□□□ -1.26
COL12A1-201ENST00000322507 UNQ9165/PRO28630Q6UXU0 137 aa7.18□□□□□ -1.26
COL12A1-201ENST00000322507 LINC00322Q6ZN03 302 aaPredicted RBP7.18□□□□□ -1.26
COL12A1-201ENST00000322507 Q6ZTC4 211 aa7.18□□□□□ -1.26
COL12A1-201ENST00000322507 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
COL12A1-201ENST00000322507 GRNP28799 593 aaKnown RBP7.17□□□□□ -1.26
COL12A1-201ENST00000322507 IGLV4-3A0A075B6K6 122 aa7.17□□□□□ -1.26
COL12A1-201ENST00000322507 DEFB114Q30KQ6 69 aa7.17□□□□□ -1.26
COL12A1-201ENST00000322507 COL4A3Q01955 1670 aa7.17□□□□□ -1.26
COL12A1-201ENST00000322507 CHCHD7Q9BUK0 85 aa7.17□□□□□ -1.26
COL12A1-201ENST00000322507 IGLV2-8P01709 118 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms