RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 KIR2DL4Q99706 377 aa11.5□□□□□ -0.57
SSNA1-201ENST00000322310 RETNLBQ9BQ08 111 aa11.5□□□□□ -0.57
SSNA1-201ENST00000322310 TIMM21Q9BVV7 248 aa11.5□□□□□ -0.57
SSNA1-201ENST00000322310 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
SSNA1-201ENST00000322310 FAM231DQ6ZW35 169 aa11.49□□□□□ -0.57
SSNA1-201ENST00000322310 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
SSNA1-201ENST00000322310 CT83Q5H943 113 aa11.48□□□□□ -0.57
SSNA1-201ENST00000322310 KIAA0087Q14695 138 aa11.47□□□□□ -0.57
SSNA1-201ENST00000322310 TYMSOSQ8TAI1 123 aa11.47□□□□□ -0.57
SSNA1-201ENST00000322310 C2orf82Q6UX34 121 aa11.46□□□□□ -0.57
SSNA1-201ENST00000322310 TMEM18Q96B42 140 aa11.46□□□□□ -0.57
SSNA1-201ENST00000322310 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
SSNA1-201ENST00000322310 CDIP1Q9H305 208 aa11.45□□□□□ -0.58
SSNA1-201ENST00000322310 TAGLN2P37802 199 aaKnown RBP11.44□□□□□ -0.58
SSNA1-201ENST00000322310 CTDSP1Q9GZU7 261 aa11.44□□□□□ -0.58
SSNA1-201ENST00000322310 TRBV30A0A0K0K1B3 111 aa11.43□□□□□ -0.58
SSNA1-201ENST00000322310 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
SSNA1-201ENST00000322310 PPP1R17O96001 155 aa11.43□□□□□ -0.58
SSNA1-201ENST00000322310 CRYGAP11844 174 aa11.43□□□□□ -0.58
SSNA1-201ENST00000322310 NUPR1O60356 82 aa11.42□□□□□ -0.58
SSNA1-201ENST00000322310 RGS21Q2M5E4 152 aa11.42□□□□□ -0.58
SSNA1-201ENST00000322310 ANAPC11Q9NYG5 84 aa11.42□□□□□ -0.58
SSNA1-201ENST00000322310 TGIF2-C20orf24A0A0A6YYL0 155 aa11.41□□□□□ -0.58
SSNA1-201ENST00000322310 PPP1R2P9O14990 202 aa11.41□□□□□ -0.58
SSNA1-201ENST00000322310 HBBP68871 147 aa11.41□□□□□ -0.58
SSNA1-201ENST00000322310 SPANXA1Q9NS26 97 aa11.41□□□□□ -0.58
SSNA1-201ENST00000322310 C22orf24Q9Y442 160 aa11.41□□□□□ -0.58
SSNA1-201ENST00000322310 CEBPGP53567 150 aa11.4□□□□□ -0.58
SSNA1-201ENST00000322310 TPRXLQ17RH7 258 aa11.4□□□□□ -0.58
SSNA1-201ENST00000322310 PACRGQ96M98 296 aaPredicted RBP11.4□□□□□ -0.58
SSNA1-201ENST00000322310 TMEM250H0YL14 139 aa11.39□□□□□ -0.59
SSNA1-201ENST00000322310 MRPS36P82909 103 aaKnown RBP11.39□□□□□ -0.59
SSNA1-201ENST00000322310 MRPL51Q4U2R6 128 aaKnown RBP11.39□□□□□ -0.59
SSNA1-201ENST00000322310 LINC00469Q8N7U9 141 aa11.39□□□□□ -0.59
SSNA1-201ENST00000322310 RIGQ13278 110 aa11.38□□□□□ -0.59
SSNA1-201ENST00000322310 KRTAP13-2Q52LG2 175 aa11.38□□□□□ -0.59
SSNA1-201ENST00000322310 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
SSNA1-201ENST00000322310 C20orf78Q9BR46 151 aa11.37□□□□□ -0.59
SSNA1-201ENST00000322310 XAGE1AQ9HD64 81 aa11.37□□□□□ -0.59
SSNA1-201ENST00000322310 IGLV7-46A0A075B6I9 117 aa11.36□□□□□ -0.59
SSNA1-201ENST00000322310 LINC00242Q5T6M2 205 aa11.36□□□□□ -0.59
SSNA1-201ENST00000322310 LINC01551Q86U37 167 aa11.36□□□□□ -0.59
SSNA1-201ENST00000322310 BCE1O60756 84 aa11.35□□□□□ -0.59
SSNA1-201ENST00000322310 LBHQ53QV2 105 aaPredicted RBP11.35□□□□□ -0.59
SSNA1-201ENST00000322310 LCE2DQ5TA82 110 aaPredicted RBP11.35□□□□□ -0.59
SSNA1-201ENST00000322310 FAM104BQ5XKR9 115 aa11.35□□□□□ -0.59
SSNA1-201ENST00000322310 CRCT1Q9UGL9 99 aa11.35□□□□□ -0.59
SSNA1-201ENST00000322310 TRBV24-1A0A075B6N3 115 aa11.34□□□□□ -0.59
SSNA1-201ENST00000322310 ZNF727A8MUV8 499 aa11.34□□□□□ -0.59
SSNA1-201ENST00000322310 TCAPO15273 167 aa11.34□□□□□ -0.59
SSNA1-201ENST00000322310 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
SSNA1-201ENST00000322310 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
SSNA1-201ENST00000322310 OSTCQ9NRP0 149 aa11.34□□□□□ -0.59
SSNA1-201ENST00000322310 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
SSNA1-201ENST00000322310 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.6
SSNA1-201ENST00000322310 LINC00304Q8N9R0 145 aa11.33□□□□□ -0.6
SSNA1-201ENST00000322310 V9GYV3 84 aa11.33□□□□□ -0.6
SSNA1-201ENST00000322310 CKS2P33552 79 aa11.32□□□□□ -0.6
SSNA1-201ENST00000322310 SMIM7Q9BQ49 75 aa11.32□□□□□ -0.6
SSNA1-201ENST00000322310 BATF3Q9NR55 127 aa11.32□□□□□ -0.6
SSNA1-201ENST00000322310 FSIP2Q5CZC0 6907 aa11.32□□□□□ -0.6
SSNA1-201ENST00000322310 LINC00862A6NCI5 91 aa11.31□□□□□ -0.6
SSNA1-201ENST00000322310 MRPL55Q7Z7F7 128 aaKnown RBP11.31□□□□□ -0.6
SSNA1-201ENST00000322310 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
SSNA1-201ENST00000322310 TOMM7Q9P0U1 55 aa11.3□□□□□ -0.6
SSNA1-201ENST00000322310 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
SSNA1-201ENST00000322310 RPL37AP8A6NKH3 93 aa11.29□□□□□ -0.6
SSNA1-201ENST00000322310 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
SSNA1-201ENST00000322310 NPYP01303 97 aa11.28□□□□□ -0.6
SSNA1-201ENST00000322310 CKS1BP61024 79 aa11.28□□□□□ -0.6
SSNA1-201ENST00000322310 TP73-AS1Q9UF72 201 aa11.28□□□□□ -0.6
SSNA1-201ENST00000322310 NAT8BQ9UHF3 227 aa11.28□□□□□ -0.6
SSNA1-201ENST00000322310 D6R8Y8 96 aa11.27□□□□□ -0.61
SSNA1-201ENST00000322310 PRSS2P07478 247 aa11.27□□□□□ -0.61
SSNA1-201ENST00000322310 ZC2HC1BQ5TFG8 222 aa11.26□□□□□ -0.61
SSNA1-201ENST00000322310 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
SSNA1-201ENST00000322310 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
SSNA1-201ENST00000322310 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
SSNA1-201ENST00000322310 PPDPFQ9H3Y8 114 aa11.26□□□□□ -0.61
SSNA1-201ENST00000322310 LINC01547P58512 204 aaPredicted RBP11.25□□□□□ -0.61
SSNA1-201ENST00000322310 FAM229BQ4G0N7 80 aa11.25□□□□□ -0.61
SSNA1-201ENST00000322310 C6orf226Q5I0X4 101 aa11.25□□□□□ -0.61
SSNA1-201ENST00000322310 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
SSNA1-201ENST00000322310 PYGO1Q9Y3Y4 419 aa11.25□□□□□ -0.61
SSNA1-201ENST00000322310 GAGE10A6NGK3 116 aa11.24□□□□□ -0.61
SSNA1-201ENST00000322310 FAM74A3Q4VXF1 159 aa11.24□□□□□ -0.61
SSNA1-201ENST00000322310 UBE2AP49459 152 aa11.23□□□□□ -0.61
SSNA1-201ENST00000322310 Q6ZN92 141 aa11.23□□□□□ -0.61
SSNA1-201ENST00000322310 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
SSNA1-201ENST00000322310 EIF5A2Q9GZV4 153 aaKnown RBP11.23□□□□□ -0.61
SSNA1-201ENST00000322310 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
SSNA1-201ENST00000322310 Q8IZM0 81 aa11.22□□□□□ -0.61
SSNA1-201ENST00000322310 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
SSNA1-201ENST00000322310 RAB5AP20339 215 aa11.21□□□□□ -0.61
SSNA1-201ENST00000322310 BLOC1S1P78537 153 aa11.21□□□□□ -0.61
SSNA1-201ENST00000322310 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
SSNA1-201ENST00000322310 ALKAL2Q6UX46 152 aa11.2□□□□□ -0.62
SSNA1-201ENST00000322310 C2orf88Q9BSF0 95 aa11.2□□□□□ -0.62
SSNA1-201ENST00000322310 F8VRH5 84 aa11.19□□□□□ -0.62
SSNA1-201ENST00000322310 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms