RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SDIM1Q6ZPB5 146 aa10.69□□□□□ -0.7
LRRC42-201ENST00000319223 VCX2Q9H322 139 aa10.69□□□□□ -0.7
LRRC42-201ENST00000319223 A0A096LNJ9 63 aa10.68□□□□□ -0.7
LRRC42-201ENST00000319223 LINC00614P0C842 121 aa10.68□□□□□ -0.7
LRRC42-201ENST00000319223 MALP21145 153 aa10.68□□□□□ -0.7
LRRC42-201ENST00000319223 G0S2P27469 103 aa10.68□□□□□ -0.7
LRRC42-201ENST00000319223 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
LRRC42-201ENST00000319223 TIMM17AQ99595 171 aa10.68□□□□□ -0.7
LRRC42-201ENST00000319223 COLCA2A8K830 154 aa10.67□□□□□ -0.7
LRRC42-201ENST00000319223 SCO1O75880 301 aa10.67□□□□□ -0.7
LRRC42-201ENST00000319223 SMR3BP02814 79 aaPredicted RBP10.67□□□□□ -0.7
LRRC42-201ENST00000319223 NPSP0C0P6 89 aa10.67□□□□□ -0.7
LRRC42-201ENST00000319223 Q6ZN92 141 aa10.67□□□□□ -0.7
LRRC42-201ENST00000319223 ERASQ7Z444 233 aa10.67□□□□□ -0.7
LRRC42-201ENST00000319223 PANO1I0J062 215 aa10.67□□□□□ -0.7
LRRC42-201ENST00000319223 TRGC2P03986 189 aa10.66□□□□□ -0.7
LRRC42-201ENST00000319223 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
LRRC42-201ENST00000319223 Q8N1X5 172 aa10.66□□□□□ -0.7
LRRC42-201ENST00000319223 C2orf88Q9BSF0 95 aa10.66□□□□□ -0.7
LRRC42-201ENST00000319223 IGLV4-69A0A075B6H9 119 aa10.65□□□□□ -0.7
LRRC42-201ENST00000319223 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.65□□□□□ -0.7
LRRC42-201ENST00000319223 SCXQ7RTU7 201 aa10.65□□□□□ -0.7
LRRC42-201ENST00000319223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.65□□□□□ -0.7
LRRC42-201ENST00000319223 IGHV3-64A0A075B6Q5 118 aa10.64□□□□□ -0.71
LRRC42-201ENST00000319223 ZNF561-AS1K7EIQ3 104 aa10.64□□□□□ -0.71
LRRC42-201ENST00000319223 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
LRRC42-201ENST00000319223 CIRBP-AS1Q8TBR5 109 aa10.63□□□□□ -0.71
LRRC42-201ENST00000319223 A0A087WZ39 114 aa10.62□□□□□ -0.71
LRRC42-201ENST00000319223 APOMO95445 188 aa10.62□□□□□ -0.71
LRRC42-201ENST00000319223 CHTF8P0CG12 524 aa10.62□□□□□ -0.71
LRRC42-201ENST00000319223 PAPPA-AS1Q5QFB9 102 aa10.62□□□□□ -0.71
LRRC42-201ENST00000319223 FAM19A3Q7Z5A8 133 aa10.62□□□□□ -0.71
LRRC42-201ENST00000319223 A0A0J9YXV3 536 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 RAB5BP61020 215 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 SPAG11BQ08648 103 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 Q6ZRU5 148 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 ORAOV1Q8WV07 137 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 LINC01549A6NIU2 74 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 CARD19Q96LW7 228 aa10.61□□□□□ -0.71
LRRC42-201ENST00000319223 HBDP02042 147 aa10.6□□□□□ -0.71
LRRC42-201ENST00000319223 PDZD11Q5EBL8 140 aa10.6□□□□□ -0.71
LRRC42-201ENST00000319223 CST9LQ9H4G1 147 aa10.6□□□□□ -0.71
LRRC42-201ENST00000319223 OR10D4PQ8NGN7 298 aa10.59□□□□□ -0.71
LRRC42-201ENST00000319223 CAMK2N2Q96S95 79 aa10.59□□□□□ -0.71
LRRC42-201ENST00000319223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
LRRC42-201ENST00000319223 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
LRRC42-201ENST00000319223 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
LRRC42-201ENST00000319223 FAT1Q14517 4588 aa10.58□□□□□ -0.72
LRRC42-201ENST00000319223 CIRBPQ14011 172 aaKnown RBP10.58□□□□□ -0.72
LRRC42-201ENST00000319223 PMVKQ15126 192 aa10.58□□□□□ -0.72
LRRC42-201ENST00000319223 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.72
LRRC42-201ENST00000319223 C2orf48Q96LS8 159 aa10.58□□□□□ -0.72
LRRC42-201ENST00000319223 LINC00310P59036 64 aa10.57□□□□□ -0.72
LRRC42-201ENST00000319223 C10orf25Q5T742 122 aa10.57□□□□□ -0.72
LRRC42-201ENST00000319223 Q5VSD8 79 aa10.57□□□□□ -0.72
LRRC42-201ENST00000319223 A0A096LNI7 61 aa10.56□□□□□ -0.72
LRRC42-201ENST00000319223 EPM2AB3EWF7 344 aa10.56□□□□□ -0.72
LRRC42-201ENST00000319223 HERVK_113P63121 156 aa10.56□□□□□ -0.72
LRRC42-201ENST00000319223 BAGE3Q86Y29 109 aa10.56□□□□□ -0.72
LRRC42-201ENST00000319223 GEMIN7Q9H840 131 aaKnown RBP10.56□□□□□ -0.72
LRRC42-201ENST00000319223 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 SEC11AP67812 179 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 LINC01561Q8N1V8 128 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 SPACA4Q8TDM5 124 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 NDUFA6P56556 154 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 FAM19A2Q8N3H0 131 aa10.55□□□□□ -0.72
LRRC42-201ENST00000319223 ABCA13Q86UQ4 5058 aa10.54□□□□□ -0.72
LRRC42-201ENST00000319223 NUPR1O60356 82 aa10.54□□□□□ -0.72
LRRC42-201ENST00000319223 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
LRRC42-201ENST00000319223 DPH3Q96FX2 82 aa10.54□□□□□ -0.72
LRRC42-201ENST00000319223 PCLOQ9Y6V0 5065 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 A0A087WYN8 130 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 SERF1AO75920 110 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 LINC00469Q8N7U9 141 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 ATP5LO75964 103 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 MAJINQ3KP22 176 aa10.53□□□□□ -0.72
LRRC42-201ENST00000319223 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
LRRC42-201ENST00000319223 NDUFA1O15239 70 aa10.52□□□□□ -0.73
LRRC42-201ENST00000319223 HSBP1O75506 76 aa10.52□□□□□ -0.73
LRRC42-201ENST00000319223 MRPL35Q9NZE8 188 aaKnown RBP10.52□□□□□ -0.73
LRRC42-201ENST00000319223 TOMM7Q9P0U1 55 aa10.52□□□□□ -0.73
LRRC42-201ENST00000319223 C6orf48Q9UBA6 75 aa10.52□□□□□ -0.73
LRRC42-201ENST00000319223 LOC107984640A0A0U1RRK4 108 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 F8WDY8 70 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 IGLC3P0DOY3 106 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 PTTG1IPP53801 180 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 GAGE2BQ13066 116 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 RNF151Q2KHN1 245 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 IFI27L1Q96BM0 104 aa10.5□□□□□ -0.73
LRRC42-201ENST00000319223 PACRGQ96M98 296 aaPredicted RBP10.5□□□□□ -0.73
LRRC42-201ENST00000319223 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
LRRC42-201ENST00000319223 SPINK8P0C7L1 97 aa10.49□□□□□ -0.73
LRRC42-201ENST00000319223 STPG4Q8N801 248 aa10.49□□□□□ -0.73
LRRC42-201ENST00000319223 PLAC8Q9NZF1 115 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms