RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
RPGR-201ENST00000318842 LRRC75A-AS1Q8N1F1 130 aa6.89□□□□□ -1.31
RPGR-201ENST00000318842 A0A087WYN8 130 aa6.89□□□□□ -1.31
RPGR-201ENST00000318842 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
RPGR-201ENST00000318842 A0A096LPF7 62 aa6.88□□□□□ -1.31
RPGR-201ENST00000318842 TIRAPP58753 221 aa6.88□□□□□ -1.31
RPGR-201ENST00000318842 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
RPGR-201ENST00000318842 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
RPGR-201ENST00000318842 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
RPGR-201ENST00000318842 SPANXCQ9NY87 97 aa6.87□□□□□ -1.31
RPGR-201ENST00000318842 F5H768 121 aa6.87□□□□□ -1.31
RPGR-201ENST00000318842 J3KT08 172 aa6.87□□□□□ -1.31
RPGR-201ENST00000318842 UBR5O95071 2799 aaPredicted RBP6.87□□□□□ -1.31
RPGR-201ENST00000318842 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
RPGR-201ENST00000318842 OR13C6PQ8NH95 151 aa6.87□□□□□ -1.31
RPGR-201ENST00000318842 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 ITPR2Q14571 2701 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 NCR3O14931 201 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 A0A1B0GX51 115 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 PRB1P04280 392 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 C9orf153Q5TBE3 101 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 C11orf72Q8NBR9 251 aa6.86□□□□□ -1.31
RPGR-201ENST00000318842 NBL1P41271 181 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 EDA2RQ9HAV5 297 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
RPGR-201ENST00000318842 H3BT86 120 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 K7EMT4 169 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 MRAPQ8TCY5 172 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 MAP6D1Q9H9H5 199 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 hADV29S1A0JD25 119 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 KIR2DL5BQ8NHK3 375 aa6.85□□□□□ -1.31
RPGR-201ENST00000318842 NDUFA1O15239 70 aa6.84□□□□□ -1.31
RPGR-201ENST00000318842 RPL35AP18077 110 aaKnown RBP6.84□□□□□ -1.31
RPGR-201ENST00000318842 PYGO1Q9Y3Y4 419 aa6.84□□□□□ -1.31
RPGR-201ENST00000318842 CR1P17927 2039 aa6.84□□□□□ -1.31
RPGR-201ENST00000318842 UCNP55089 124 aa6.84□□□□□ -1.31
RPGR-201ENST00000318842 IGLV4-60A0A075B6I1 120 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 COX7A2LO14548 114 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 LINC00158P58513 81 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 KRTAP10-9P60411 292 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 Q8N3U1 123 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 ESM1Q9NQ30 184 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 HILS1P60008 231 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
RPGR-201ENST00000318842 DYNLRB2Q8TF09 96 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 ZNF702PQ9H963 129 aa6.83□□□□□ -1.32
RPGR-201ENST00000318842 TENM1Q9UKZ4 2725 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 A8MTW9 85 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 CIRBPQ14011 172 aaKnown RBP6.82□□□□□ -1.32
RPGR-201ENST00000318842 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 C1orf158Q8N1D5 194 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 HIVEP1P15822 2718 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 LECT2O14960 151 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 HERVK_113P63121 156 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 UNC79Q9P2D8 2635 aa6.82□□□□□ -1.32
RPGR-201ENST00000318842 H3BUA1 57 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 TMEM89A2RUT3 159 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 ODF3L2Q3SX64 289 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 WFDC11Q8NEX6 87 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 SPATA3Q8NHX4 192 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 SND1-IT1Q9HBX3 110 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 LINC00846Q9NV44 126 aa6.81□□□□□ -1.32
RPGR-201ENST00000318842 TRRAPQ9Y4A5 3859 aa6.8□□□□□ -1.32
RPGR-201ENST00000318842 HIST2H2BCQ6DN03 193 aa6.8□□□□□ -1.32
RPGR-201ENST00000318842 PAX4O43316 350 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 DSCR8Q96T75 97 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
RPGR-201ENST00000318842 TRGV2A0A075B6R0 118 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 TRBV7-7A0A0K0K1E9 115 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 XCL1P47992 114 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 HIST1H4AP62805 103 aaKnown RBP6.79□□□□□ -1.32
RPGR-201ENST00000318842 C9orf116Q5BN46 136 aaPredicted RBP6.79□□□□□ -1.32
RPGR-201ENST00000318842 IGLV10-54A0A075B6I4 117 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 DEFB4AO15263 64 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
RPGR-201ENST00000318842 DEFB130BP0DP73 79 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 DEFB130AP0DP74 79 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 MALP21145 153 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 CCL18P55774 89 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 RPL36AP83881 106 aaKnown RBP6.78□□□□□ -1.32
RPGR-201ENST00000318842 RPL36ALQ969Q0 106 aaKnown RBP6.78□□□□□ -1.32
RPGR-201ENST00000318842 TENM4Q6N022 2769 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 UBE2L6O14933 153 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 INSP01308 110 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 CRPP02741 224 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 CXCL5P42830 114 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 STHQ8IWL8 128 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
RPGR-201ENST00000318842 RNF152Q8N8N0 203 aa6.77□□□□□ -1.33
RPGR-201ENST00000318842 DNAL4O96015 105 aa6.76□□□□□ -1.33
RPGR-201ENST00000318842 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
RPGR-201ENST00000318842 DEFB121Q5J5C9 76 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms