RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C5orf38Q86SI9 138 aa10.31□□□□□ -0.76
PDLIM5-202ENST00000318007 IGHV3-64A0A075B6Q5 118 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 GAGE12HA6NDE8 117 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 C11orf86A6NJI1 115 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 MIAQ16674 131 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 TTC32Q5I0X7 151 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 GEMIN7Q9H840 131 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 F8VRH5 84 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 LECT2O14960 151 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
PDLIM5-202ENST00000318007 TRAV8-3A0A0A6YYJ7 113 aa10.29□□□□□ -0.76
PDLIM5-202ENST00000318007 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
PDLIM5-202ENST00000318007 NPSP0C0P6 89 aa10.29□□□□□ -0.76
PDLIM5-202ENST00000318007 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
PDLIM5-202ENST00000318007 CDKN2A-AS1Q9UH64 79 aa10.28□□□□□ -0.76
PDLIM5-202ENST00000318007 LCE6AA0A183 80 aa10.28□□□□□ -0.76
PDLIM5-202ENST00000318007 PSCAO43653 123 aa10.28□□□□□ -0.76
PDLIM5-202ENST00000318007 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.77
PDLIM5-202ENST00000318007 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
PDLIM5-202ENST00000318007 DPM2O94777 84 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 IGKCP01834 107 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 MAJINQ3KP22 176 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 TINCRA0A1B0GVN0 87 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 C20orf202A1L168 122 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 FOXI1Q12951 378 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 CDPF1Q6NVV7 123 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 Q6ZR54 194 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 CBY1Q9Y3M2 126 aa10.26□□□□□ -0.77
PDLIM5-202ENST00000318007 TRAV8-4A0A0B4J246 113 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 HERVK_113P63121 156 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 LBHQ53QV2 105 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 MALP21145 153 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 PYY3Q5JQD4 70 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 STPG4Q8N801 248 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 LINC00526Q96FQ7 95 aa10.25□□□□□ -0.77
PDLIM5-202ENST00000318007 IGHV3OR16-9A0A0B4J2B5 98 aa10.24□□□□□ -0.77
PDLIM5-202ENST00000318007 hDV102S1A0JD36 115 aa10.24□□□□□ -0.77
PDLIM5-202ENST00000318007 K7EP13 123 aa10.24□□□□□ -0.77
PDLIM5-202ENST00000318007 PLNP26678 52 aa10.24□□□□□ -0.77
PDLIM5-202ENST00000318007 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
PDLIM5-202ENST00000318007 RYR2Q92736 4967 aa10.24□□□□□ -0.77
PDLIM5-202ENST00000318007 COX7A2LO14548 114 aa10.23□□□□□ -0.77
PDLIM5-202ENST00000318007 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
PDLIM5-202ENST00000318007 RYR3Q15413 4870 aa10.23□□□□□ -0.77
PDLIM5-202ENST00000318007 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
PDLIM5-202ENST00000318007 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
PDLIM5-202ENST00000318007 TOMM7Q9P0U1 55 aa10.23□□□□□ -0.77
PDLIM5-202ENST00000318007 SEC11AP67812 179 aa10.22□□□□□ -0.77
PDLIM5-202ENST00000318007 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
PDLIM5-202ENST00000318007 RMI2Q96E14 147 aa10.22□□□□□ -0.77
PDLIM5-202ENST00000318007 WFDC2Q14508 124 aa10.21□□□□□ -0.77
PDLIM5-202ENST00000318007 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.77
PDLIM5-202ENST00000318007 JOSD1Q15040 202 aaPredicted RBP10.21□□□□□ -0.78
PDLIM5-202ENST00000318007 Q6ZRN7 208 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-202ENST00000318007 FAM19A3Q7Z5A8 133 aa10.2□□□□□ -0.78
PDLIM5-202ENST00000318007 A0A087WZ39 114 aa10.19□□□□□ -0.78
PDLIM5-202ENST00000318007 SMIM1B2RUZ4 78 aa10.19□□□□□ -0.78
PDLIM5-202ENST00000318007 FUSP35637 526 aaKnown RBP eCLIP10.19□□□□□ -0.78
PDLIM5-202ENST00000318007 ORAOV1Q8WV07 137 aa10.19□□□□□ -0.78
PDLIM5-202ENST00000318007 TM2D2Q9BX73 214 aa10.19□□□□□ -0.78
PDLIM5-202ENST00000318007 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
PDLIM5-202ENST00000318007 H3BRM9 83 aa10.18□□□□□ -0.78
PDLIM5-202ENST00000318007 PAM16Q9Y3D7 125 aa10.18□□□□□ -0.78
PDLIM5-202ENST00000318007 A0A1B0GV90 55 aa10.17□□□□□ -0.78
PDLIM5-202ENST00000318007 TMEM223A0PJW6 202 aa10.17□□□□□ -0.78
PDLIM5-202ENST00000318007 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
PDLIM5-202ENST00000318007 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-202ENST00000318007 C15orf56Q8N910 161 aa10.17□□□□□ -0.78
PDLIM5-202ENST00000318007 TTTY13Q9BZ97 58 aa10.17□□□□□ -0.78
PDLIM5-202ENST00000318007 NMUP48645 174 aa10.16□□□□□ -0.78
PDLIM5-202ENST00000318007 COX11Q9Y6N1 276 aa10.16□□□□□ -0.78
PDLIM5-202ENST00000318007 IGKV2D-26A0A0A0MRZ7 120 aa10.15□□□□□ -0.78
PDLIM5-202ENST00000318007 RTL8CO15255 209 aa10.15□□□□□ -0.78
PDLIM5-202ENST00000318007 TP73-AS1Q9UF72 201 aa10.15□□□□□ -0.78
PDLIM5-202ENST00000318007 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
PDLIM5-202ENST00000318007 C2orf82Q6UX34 121 aa10.15□□□□□ -0.78
PDLIM5-202ENST00000318007 C14orf144Q96I85 54 aa10.15□□□□□ -0.78
PDLIM5-202ENST00000318007 DNAH17Q9UFH2 4485 aa10.15□□□□□ -0.78
PDLIM5-202ENST00000318007 TNP2Q05952 138 aa10.14□□□□□ -0.79
PDLIM5-202ENST00000318007 SPAG11BQ08648 103 aa10.14□□□□□ -0.79
PDLIM5-202ENST00000318007 FAT2Q9NYQ8 4349 aa10.14□□□□□ -0.79
PDLIM5-202ENST00000318007 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
PDLIM5-202ENST00000318007 HERVK_113P61574 105 aa10.14□□□□□ -0.79
PDLIM5-202ENST00000318007 VAMP8Q9BV40 100 aa10.14□□□□□ -0.79
PDLIM5-202ENST00000318007 IGHV1-58A0A0C4DH39 117 aa10.13□□□□□ -0.79
PDLIM5-202ENST00000318007 ZNF561-AS1K7EIQ3 104 aa10.13□□□□□ -0.79
PDLIM5-202ENST00000318007 APOMO95445 188 aa10.13□□□□□ -0.79
PDLIM5-202ENST00000318007 PRSS2P07478 247 aa10.13□□□□□ -0.79
PDLIM5-202ENST00000318007 ZNF625Q96I27 306 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-202ENST00000318007 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
PDLIM5-202ENST00000318007 COX7B2Q8TF08 81 aa10.12□□□□□ -0.79
PDLIM5-202ENST00000318007 PCP4P48539 62 aa10.12□□□□□ -0.79
PDLIM5-202ENST00000318007 SPATA45Q537H7 98 aa10.12□□□□□ -0.79
PDLIM5-202ENST00000318007 LRCOL1A6NCL2 159 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms