RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 IGLV10-54A0A075B6I4 117 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 B4DSR2 109 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 LST1O00453 97 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 INSP01308 110 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 RBMY1FQ15415 496 aaKnown RBP5.57□□□□□ -1.52
CDHR3-201ENST00000317716 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 LINC00308Q8TCZ7 52 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 MGAM2Q2M2H8 2515 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 ODF3BA8MYP8 253 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 DAD1P61803 113 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 DEFB113Q30KQ7 82 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 NOP10Q9NPE3 64 aaKnown RBP5.56□□□□□ -1.52
CDHR3-201ENST00000317716 VPREB3Q9UKI3 123 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 PKIGQ9Y2B9 76 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 COX7A2LO14548 114 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 ACYP1P07311 99 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 TIRAPP58753 221 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 UBL5Q9BZL1 73 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 ESM1Q9NQ30 184 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 SPANXA1Q9NS26 97 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 PSMG3-AS1Q96PY0 264 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 FBN2P35556 2912 aa5.56□□□□□ -1.52
CDHR3-201ENST00000317716 TRAV13-2A0A0B4J235 113 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 TRBV27A0A0K0K1C4 114 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 GHRHP01286 108 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 A0A0J9YX75 114 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 LINC01619G3V211 115 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 NHLRC4P0CG21 123 aaPredicted RBP5.55□□□□□ -1.52
CDHR3-201ENST00000317716 FAM110AQ9BQ89 295 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 SIRPDQ9H106 197 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 SCXQ7RTU7 201 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 Q9UF83 564 aa5.55□□□□□ -1.52
CDHR3-201ENST00000317716 IGHV4OR15-8A0A075B7B6 117 aa5.54□□□□□ -1.52
CDHR3-201ENST00000317716 A0A087WW49 117 aa5.54□□□□□ -1.52
CDHR3-201ENST00000317716 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-201ENST00000317716 MUC4Q99102 2169 aa5.54□□□□□ -1.52
CDHR3-201ENST00000317716 TNFRSF13BO14836 293 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-201ENST00000317716 DEFB112Q30KQ8 113 aa5.54□□□□□ -1.52
CDHR3-201ENST00000317716 COX7B2Q8TF08 81 aa5.54□□□□□ -1.52
CDHR3-201ENST00000317716 TRAV25A0A0B4J276 109 aa5.53□□□□□ -1.52
CDHR3-201ENST00000317716 C5orf47Q569G3 176 aa5.53□□□□□ -1.52
CDHR3-201ENST00000317716 ENHOQ6UWT2 76 aa5.53□□□□□ -1.52
CDHR3-201ENST00000317716 DNAJC30Q96LL9 226 aa5.53□□□□□ -1.52
CDHR3-201ENST00000317716 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
CDHR3-201ENST00000317716 MED14OSP0DP75 135 aa5.52□□□□□ -1.53
CDHR3-201ENST00000317716 CUBNO60494 3623 aa5.52□□□□□ -1.53
CDHR3-201ENST00000317716 LMO4P61968 165 aa5.52□□□□□ -1.53
CDHR3-201ENST00000317716 SNURFQ9Y675 71 aa5.52□□□□□ -1.53
CDHR3-201ENST00000317716 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
CDHR3-201ENST00000317716 CITED2Q99967 270 aaPredicted RBP5.52□□□□□ -1.53
CDHR3-201ENST00000317716 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 COX7CP15954 63 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 Q8N6K4 173 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 NBEAL1Q6ZS30 2694 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 Q6ZTI0 123 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 Q8N2B8 174 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 EIF4EBP3O60516 100 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-201ENST00000317716 PSMB8P28062 276 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 COX6A2Q02221 97 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 COX8CQ7Z4L0 72 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 LINC01356Q8N9X3 169 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 KIR2DL5BQ8NHK3 375 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 OVOL2Q9BRP0 275 aa5.51□□□□□ -1.53
CDHR3-201ENST00000317716 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
CDHR3-201ENST00000317716 VPS13CQ709C8 3753 aa5.5□□□□□ -1.53
CDHR3-201ENST00000317716 IGHV4-28A0A0C4DH34 117 aa5.5□□□□□ -1.53
CDHR3-201ENST00000317716 CSDC2Q9Y534 153 aaKnown RBP5.5□□□□□ -1.53
CDHR3-201ENST00000317716 C11orf71Q6IPW1 123 aa5.5□□□□□ -1.53
CDHR3-201ENST00000317716 Q6Q795 121 aa5.5□□□□□ -1.53
CDHR3-201ENST00000317716 KLLNB2CW77 178 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 IGHG2P01859 326 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 CXCL5P42830 114 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 HILS1P60008 231 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 SS18Q15532 418 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 Q6ZSN1 163 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 TRBV6-5A0A0K0K1A5 114 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 LOC100131303A0A0U1RQF7 123 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 INAFM1C9JVW0 142 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 F5H768 121 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 ANGP03950 147 aaKnown RBP5.49□□□□□ -1.53
CDHR3-201ENST00000317716 RPL18AQ02543 176 aaKnown RBP5.49□□□□□ -1.53
CDHR3-201ENST00000317716 EBI3Q14213 229 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 LINC00526Q96FQ7 95 aa5.49□□□□□ -1.53
CDHR3-201ENST00000317716 OTOGQ6ZRI0 2925 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 PRR3P79522 188 aaKnown RBP5.48□□□□□ -1.53
CDHR3-201ENST00000317716 C18orf65Q6ZTR6 163 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 UBE2D4Q9Y2X8 147 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 NDUFA1O15239 70 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 DEFB4AO15263 64 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 AVPP01185 164 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 SMIM11BQ8TCY0 68 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 SPANXCQ9NY87 97 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 A0A087WYN8 130 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 K7EQG2 157 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 LINC00315P59091 139 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 MRPS36P82909 103 aaKnown RBP5.48□□□□□ -1.53
CDHR3-201ENST00000317716 DEFB105AQ8NG35 78 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms