RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 EDN2P20800 178 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 STHQ8IWL8 128 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 LINC01356Q8N9X3 169 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 Q96MF0 132 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 CCL19Q99731 98 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 CSPG4Q6UVK1 2322 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 A0A087WYN8 130 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 XCL2Q9UBD3 114 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 SERP1Q9Y6X1 66 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 A0A087WVE0 104 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 LINC00167Q96N53 147 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 TRAV7A0A075B6U4 112 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 DEFB114Q30KQ6 69 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 MKI67P46013 3256 aaKnown RBP3.39□□□□□ -1.87
PTPN13-201ENST00000316707 SS18Q15532 418 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 NTM-AS1Q6ZSK4 140 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 Q9UF83 564 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 MUC4Q99102 2169 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 USP9XQ93008 2570 aaPredicted RBP3.39□□□□□ -1.87
PTPN13-201ENST00000316707 XIRP2A4UGR9 3374 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 Q8IZM0 81 aa3.39□□□□□ -1.87
PTPN13-201ENST00000316707 PFN2P35080 140 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 C20orf197Q8N268 126 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 IL17DQ8TAD2 202 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 NAV2Q8IVL1 2488 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 XCL1P47992 114 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 C16orf74Q96GX8 76 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 SMIM26A0A096LP01 95 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 TRGV4A0A0C4DH28 118 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 COX17Q14061 63 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 NCR3O14931 201 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 RBM3P98179 157 aaKnown RBP3.38□□□□□ -1.87
PTPN13-201ENST00000316707 Q6ZTI0 123 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 C1orf158Q8N1D5 194 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 Q8N814 137 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 C4orf3Q8WVX3 66 aa3.38□□□□□ -1.87
PTPN13-201ENST00000316707 IGHV4-30-2A0A087WSY4 118 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 TRBV6-8A0A0A6YYG3 113 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 EYSQ5T1H1 3165 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 ODF3L2Q3SX64 289 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 NOTCH3Q9UM47 2321 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 LOC110117498A0A087WWA1 95 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 ZNF561-AS1K7EIQ3 104 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 NDUFS5O43920 106 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 ZNF702PQ9H963 129 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 DOPEY1Q5JWR5 2465 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 ARHGAP32A7KAX9 2087 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 SZT2Q5T011 3432 aa3.37□□□□□ -1.87
PTPN13-201ENST00000316707 A0A1B0GUV1 79 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 C10orf99Q6UWK7 81 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 TRIOO75962 3097 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 SLURP1P55000 103 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 Q6YL49 198 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 AVPP01185 164 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 ENHOQ6UWT2 76 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 HRCT1Q6UXD1 115 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 KIR2DL5BQ8NHK3 375 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 PRRC2AP48634 2157 aaKnown RBP3.36□□□□□ -1.87
PTPN13-201ENST00000316707 TRAV23DV6A0A075B6W5 121 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 LAMTOR3Q9UHA4 124 aa3.36□□□□□ -1.87
PTPN13-201ENST00000316707 ZNF292O60281 2723 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 LINC00959A0A1B0GUT2 108 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 CXCL6P80162 114 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 FHL2Q14192 279 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 HAMPP81172 84 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 NOP10Q9NPE3 64 aaKnown RBP3.35□□□□□ -1.87
PTPN13-201ENST00000316707 FSHBP01225 129 aa3.35□□□□□ -1.87
PTPN13-201ENST00000316707 SORL1Q92673 2214 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 CCL24O00175 119 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 ERC2-IT1O76042 136 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 C6orf223Q8N319 242 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 SLPIP03973 132 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 NCOR2Q9Y618 2525 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 IGHV4-28A0A0C4DH34 117 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 CD164L2Q6UWJ8 174 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 PRR15LQ9BU68 103 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 C19orf84I3L1E1 186 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 C6orf99Q4VX62 202 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 LINC00575Q6W349 94 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 FAM19A1Q7Z5A9 133 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 UBE2DNLQ8IWF7 75 aa3.34□□□□□ -1.87
PTPN13-201ENST00000316707 C9orf66Q5T8R8 295 aa3.34□□□□□ -1.88
PTPN13-201ENST00000316707 WNK1Q9H4A3 2382 aa3.34□□□□□ -1.88
PTPN13-201ENST00000316707 LINC00482Q8N8I6 264 aa3.34□□□□□ -1.88
PTPN13-201ENST00000316707 H7BZZ5 65 aa3.33□□□□□ -1.88
PTPN13-201ENST00000316707 Q5XG85 94 aa3.33□□□□□ -1.88
PTPN13-201ENST00000316707 HIVEP3Q5T1R4 2406 aa3.33□□□□□ -1.88
PTPN13-201ENST00000316707 PRM2P04554 102 aa3.33□□□□□ -1.88
PTPN13-201ENST00000316707 C9orf129Q5T035 196 aaKnown RBP3.33□□□□□ -1.88
PTPN13-201ENST00000316707 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.33□□□□□ -1.88
PTPN13-201ENST00000316707 MDFIQ99750 246 aa3.33□□□□□ -1.88
PTPN13-201ENST00000316707 PLA2G1BP04054 148 aaKnown RBP3.33□□□□□ -1.88
PTPN13-201ENST00000316707 UBE2AP49459 152 aa3.33□□□□□ -1.88
PTPN13-201ENST00000316707 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
PTPN13-201ENST00000316707 DEFB136Q30KP8 78 aa3.33□□□□□ -1.88
PTPN13-201ENST00000316707 PTPN13Q12923 2485 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms