RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 HRCT1Q6UXD1 115 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 PRIMA1Q86XR5 153 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 CHCHD7Q9BUK0 85 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 WIPF1O43516 503 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 WNK1Q9H4A3 2382 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 PIK3CD-AS1Q5SR53 167 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 C9orf129Q5T035 196 aaKnown RBP13.06□□□□□ -0.32
SPSB4-201ENST00000310546 DGAT2L7PQ6IED9 249 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 SERP2Q8N6R1 65 aa13.06□□□□□ -0.32
SPSB4-201ENST00000310546 PRM2P04554 102 aa13.05□□□□□ -0.32
SPSB4-201ENST00000310546 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
SPSB4-201ENST00000310546 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
SPSB4-201ENST00000310546 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
SPSB4-201ENST00000310546 SYNJ2BPP57105 145 aa13.03□□□□□ -0.32
SPSB4-201ENST00000310546 Q6ZSN1 163 aa13.03□□□□□ -0.32
SPSB4-201ENST00000310546 LINC00846Q9NV44 126 aa13.03□□□□□ -0.32
SPSB4-201ENST00000310546 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
SPSB4-201ENST00000310546 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.33
SPSB4-201ENST00000310546 SNRPD3P62318 126 aaKnown RBP13.01□□□□□ -0.33
SPSB4-201ENST00000310546 COPS9Q8WXC6 57 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 F5H768 121 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 UPK3BQ9BT76 320 aa13.01□□□□□ -0.33
SPSB4-201ENST00000310546 LINC01561Q8N1V8 128 aa13□□□□□ -0.33
SPSB4-201ENST00000310546 H3BUX3 64 aa13□□□□□ -0.33
SPSB4-201ENST00000310546 MSMBP08118 114 aa12.99□□□□□ -0.33
SPSB4-201ENST00000310546 BLCAPP62952 87 aa12.99□□□□□ -0.33
SPSB4-201ENST00000310546 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
SPSB4-201ENST00000310546 A0A087WYN8 130 aa12.98□□□□□ -0.33
SPSB4-201ENST00000310546 PDZD2O15018 2839 aa12.98□□□□□ -0.33
SPSB4-201ENST00000310546 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 Q5XG85 94 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 JMJD1CQ15652 2540 aa12.97□□□□□ -0.33
SPSB4-201ENST00000310546 RBMY1A1P0DJD3 496 aaKnown RBP12.96□□□□□ -0.33
SPSB4-201ENST00000310546 RBMY1CP0DJD4 496 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 RBMY1FQ15415 496 aaKnown RBP12.96□□□□□ -0.33
SPSB4-201ENST00000310546 SMIM1B2RUZ4 78 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 CRPP02741 224 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 Q6JHZ5 121 aa12.96□□□□□ -0.33
SPSB4-201ENST00000310546 NCR3O14931 201 aa12.95□□□□□ -0.34
SPSB4-201ENST00000310546 FHL2Q14192 279 aa12.94□□□□□ -0.34
SPSB4-201ENST00000310546 Q96MF0 132 aa12.94□□□□□ -0.34
SPSB4-201ENST00000310546 RPL28P46779 137 aaKnown RBP12.94□□□□□ -0.34
SPSB4-201ENST00000310546 LINC00337Q8N6G1 96 aa12.94□□□□□ -0.34
SPSB4-201ENST00000310546 TRAV13-2A0A0B4J235 113 aa12.93□□□□□ -0.34
SPSB4-201ENST00000310546 B4DSR2 109 aa12.93□□□□□ -0.34
SPSB4-201ENST00000310546 HILS1P60008 231 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 ZNF415Q09FC8 603 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 WFDC9Q8NEX5 89 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
SPSB4-201ENST00000310546 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 K7EMT4 169 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 SLPIP03973 132 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 SMIM11BQ8TCY0 68 aa12.91□□□□□ -0.34
SPSB4-201ENST00000310546 LECT2O14960 151 aa12.9□□□□□ -0.34
SPSB4-201ENST00000310546 K7EQG2 157 aa12.9□□□□□ -0.34
SPSB4-201ENST00000310546 DEFB112Q30KQ8 113 aa12.9□□□□□ -0.34
SPSB4-201ENST00000310546 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 TRAV23DV6A0A075B6W5 121 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 H3BUA1 57 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 MIR7-3HGQ8N6C7 128 aa12.89□□□□□ -0.35
SPSB4-201ENST00000310546 IGKV2-28A0A075B6P5 120 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 IGKV2D-28P01615 120 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 GHRHP01286 108 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 DEFB113Q30KQ7 82 aa12.88□□□□□ -0.35
SPSB4-201ENST00000310546 PF4P02776 101 aa12.87□□□□□ -0.35
SPSB4-201ENST00000310546 FN1P02751 2386 aaKnown RBP12.87□□□□□ -0.35
SPSB4-201ENST00000310546 OVOL2Q9BRP0 275 aa12.87□□□□□ -0.35
SPSB4-201ENST00000310546 HIVEP2P31629 2446 aa12.87□□□□□ -0.35
SPSB4-201ENST00000310546 IGLV1-40P01703 118 aa12.86□□□□□ -0.35
SPSB4-201ENST00000310546 TOMM7Q9P0U1 55 aa12.86□□□□□ -0.35
SPSB4-201ENST00000310546 C20orf197Q8N268 126 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 AKAP9Q99996 3911 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 IGHV3-53P01767 116 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 RPL36AP83881 106 aaKnown RBP12.85□□□□□ -0.35
SPSB4-201ENST00000310546 RPL36ALQ969Q0 106 aaKnown RBP12.85□□□□□ -0.35
SPSB4-201ENST00000310546 TMEM243Q9BU79 118 aa12.85□□□□□ -0.35
SPSB4-201ENST00000310546 A0A096LNT2 108 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 CFHR3Q02985 330 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 OBSCN-AS1Q96MR7 158 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 TEP1Q99973 2627 aaKnown RBP12.84□□□□□ -0.35
SPSB4-201ENST00000310546 LINC00158P58513 81 aa12.84□□□□□ -0.35
SPSB4-201ENST00000310546 CR1P17927 2039 aa12.83□□□□□ -0.36
SPSB4-201ENST00000310546 DSCR9P59020 149 aa12.83□□□□□ -0.36
SPSB4-201ENST00000310546 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.36
SPSB4-201ENST00000310546 FAM19A1Q7Z5A9 133 aa12.82□□□□□ -0.36
SPSB4-201ENST00000310546 H0YGX0 51 aa12.82□□□□□ -0.36
SPSB4-201ENST00000310546 IGHV4-31P0DP07 118 aa12.82□□□□□ -0.36
SPSB4-201ENST00000310546 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
SPSB4-201ENST00000310546 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
SPSB4-201ENST00000310546 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
SPSB4-201ENST00000310546 PFN2P35080 140 aa12.81□□□□□ -0.36
SPSB4-201ENST00000310546 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
SPSB4-201ENST00000310546 C11orf44Q8N8P7 122 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms