RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 OR10D4PQ8NGN7 298 aa12.84□□□□□ -0.35
VEGFB-201ENST00000309422 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
VEGFB-201ENST00000309422 EPM2AB3EWF7 344 aa12.83□□□□□ -0.36
VEGFB-201ENST00000309422 FAM229AH3BQW9 127 aa12.83□□□□□ -0.36
VEGFB-201ENST00000309422 HAMPP81172 84 aa12.83□□□□□ -0.36
VEGFB-201ENST00000309422 SPAG11BQ08648 103 aa12.83□□□□□ -0.36
VEGFB-201ENST00000309422 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.36
VEGFB-201ENST00000309422 DPH3Q96FX2 82 aa12.83□□□□□ -0.36
VEGFB-201ENST00000309422 LINC00614P0C842 121 aa12.82□□□□□ -0.36
VEGFB-201ENST00000309422 ORAOV1Q8WV07 137 aa12.82□□□□□ -0.36
VEGFB-201ENST00000309422 CAMK2N2Q96S95 79 aa12.82□□□□□ -0.36
VEGFB-201ENST00000309422 CHAC1Q9BUX1 264 aa12.82□□□□□ -0.36
VEGFB-201ENST00000309422 GEMIN7Q9H840 131 aaKnown RBP12.82□□□□□ -0.36
VEGFB-201ENST00000309422 LINC01546A6NGU7 62 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 UBE2D1P51668 147 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 SYCNQ0VAF6 134 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 PACRGQ96M98 296 aaPredicted RBP12.81□□□□□ -0.36
VEGFB-201ENST00000309422 FAM30AQ9NZY2 134 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 HBDP02042 147 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 HERVK_113P63121 156 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 SCXQ7RTU7 201 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 AMELXQ99217 191 aa12.81□□□□□ -0.36
VEGFB-201ENST00000309422 IGLV4-69A0A075B6H9 119 aa12.8□□□□□ -0.36
VEGFB-201ENST00000309422 IGHV3OR16-9A0A0B4J2B5 98 aa12.8□□□□□ -0.36
VEGFB-201ENST00000309422 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.8□□□□□ -0.36
VEGFB-201ENST00000309422 YPEL4Q96NS1 127 aa12.8□□□□□ -0.36
VEGFB-201ENST00000309422 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
VEGFB-201ENST00000309422 FAM104AQ969W3 186 aa12.79□□□□□ -0.36
VEGFB-201ENST00000309422 C2orf48Q96LS8 159 aa12.79□□□□□ -0.36
VEGFB-201ENST00000309422 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
VEGFB-201ENST00000309422 A0A087WZ39 114 aa12.78□□□□□ -0.36
VEGFB-201ENST00000309422 F8WDY8 70 aa12.78□□□□□ -0.36
VEGFB-201ENST00000309422 SMR3BP02814 79 aaPredicted RBP12.78□□□□□ -0.36
VEGFB-201ENST00000309422 LINC00526Q96FQ7 95 aa12.78□□□□□ -0.36
VEGFB-201ENST00000309422 LINC00474Q9P2X8 69 aa12.78□□□□□ -0.36
VEGFB-201ENST00000309422 SLPIP03973 132 aa12.77□□□□□ -0.37
VEGFB-201ENST00000309422 PRSS2P07478 247 aa12.77□□□□□ -0.37
VEGFB-201ENST00000309422 Q5VSD8 79 aa12.77□□□□□ -0.37
VEGFB-201ENST00000309422 NDUFA1O15239 70 aa12.76□□□□□ -0.37
VEGFB-201ENST00000309422 COX6A2Q02221 97 aa12.76□□□□□ -0.37
VEGFB-201ENST00000309422 SDIM1Q6ZPB5 146 aa12.76□□□□□ -0.37
VEGFB-201ENST00000309422 LINC00173Q6ZV60 143 aa12.76□□□□□ -0.37
VEGFB-201ENST00000309422 BAGE3Q86Y29 109 aa12.76□□□□□ -0.37
VEGFB-201ENST00000309422 LINC01561Q8N1V8 128 aa12.76□□□□□ -0.37
VEGFB-201ENST00000309422 CHCHD1Q96BP2 118 aaKnown RBP12.76□□□□□ -0.37
VEGFB-201ENST00000309422 ATP5LO75964 103 aa12.75□□□□□ -0.37
VEGFB-201ENST00000309422 PMVKQ15126 192 aa12.75□□□□□ -0.37
VEGFB-201ENST00000309422 ZC2HC1BQ5TFG8 222 aa12.75□□□□□ -0.37
VEGFB-201ENST00000309422 IGKV2-24A0A0C4DH68 120 aa12.74□□□□□ -0.37
VEGFB-201ENST00000309422 PLA2G1BP04054 148 aaKnown RBP12.74□□□□□ -0.37
VEGFB-201ENST00000309422 NDUFA6P56556 154 aa12.74□□□□□ -0.37
VEGFB-201ENST00000309422 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
VEGFB-201ENST00000309422 CIRBP-AS1Q8TBR5 109 aa12.74□□□□□ -0.37
VEGFB-201ENST00000309422 HSBP1O75506 76 aa12.73□□□□□ -0.37
VEGFB-201ENST00000309422 LINC00528Q8N1L1 170 aa12.73□□□□□ -0.37
VEGFB-201ENST00000309422 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
VEGFB-201ENST00000309422 TRGC2P03986 189 aa12.72□□□□□ -0.37
VEGFB-201ENST00000309422 Q6ZRU5 148 aa12.72□□□□□ -0.37
VEGFB-201ENST00000309422 FAM19A3Q7Z5A8 133 aa12.72□□□□□ -0.37
VEGFB-201ENST00000309422 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.72□□□□□ -0.37
VEGFB-201ENST00000309422 H3BRM9 83 aa12.71□□□□□ -0.37
VEGFB-201ENST00000309422 MAJINQ3KP22 176 aa12.71□□□□□ -0.37
VEGFB-201ENST00000309422 CST9LQ9H4G1 147 aa12.71□□□□□ -0.37
VEGFB-201ENST00000309422 TOMM7Q9P0U1 55 aa12.71□□□□□ -0.37
VEGFB-201ENST00000309422 TINCRA0A1B0GVN0 87 aa12.7□□□□□ -0.38
VEGFB-201ENST00000309422 CKS1BP61024 79 aa12.7□□□□□ -0.38
VEGFB-201ENST00000309422 PMCHL1Q16048 86 aa12.7□□□□□ -0.38
VEGFB-201ENST00000309422 A0A0J9YXV3 536 aa12.69□□□□□ -0.38
VEGFB-201ENST00000309422 CHTF8P0CG12 524 aa12.69□□□□□ -0.38
VEGFB-201ENST00000309422 RPL18AQ02543 176 aaKnown RBP12.69□□□□□ -0.38
VEGFB-201ENST00000309422 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
VEGFB-201ENST00000309422 MRPL35Q9NZE8 188 aaKnown RBP12.69□□□□□ -0.38
VEGFB-201ENST00000309422 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
VEGFB-201ENST00000309422 GAGE2BQ13066 116 aa12.68□□□□□ -0.38
VEGFB-201ENST00000309422 CIRBPQ14011 172 aaKnown RBP12.68□□□□□ -0.38
VEGFB-201ENST00000309422 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
VEGFB-201ENST00000309422 URB1-AS1Q96HZ7 61 aa12.68□□□□□ -0.38
VEGFB-201ENST00000309422 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
VEGFB-201ENST00000309422 C7orf33Q8WU49 177 aa12.67□□□□□ -0.38
VEGFB-201ENST00000309422 A0A096LNI7 61 aa12.66□□□□□ -0.38
VEGFB-201ENST00000309422 CXCL5P42830 114 aa12.66□□□□□ -0.38
VEGFB-201ENST00000309422 Q8IZM0 81 aa12.66□□□□□ -0.38
VEGFB-201ENST00000309422 A0A087WYN8 130 aa12.65□□□□□ -0.38
VEGFB-201ENST00000309422 A0A096LNJ9 63 aa12.65□□□□□ -0.38
VEGFB-201ENST00000309422 TRBV30A0A0K0K1B3 111 aa12.65□□□□□ -0.38
VEGFB-201ENST00000309422 COLCA2A8K830 154 aa12.65□□□□□ -0.38
VEGFB-201ENST00000309422 PDZD11Q5EBL8 140 aa12.65□□□□□ -0.38
VEGFB-201ENST00000309422 STPG4Q8N801 248 aa12.65□□□□□ -0.38
VEGFB-201ENST00000309422 PTTG1IPP53801 180 aa12.64□□□□□ -0.39
VEGFB-201ENST00000309422 PANO1I0J062 215 aa12.62□□□□□ -0.39
VEGFB-201ENST00000309422 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
VEGFB-201ENST00000309422 RPL37AP61513 92 aaKnown RBP12.62□□□□□ -0.39
VEGFB-201ENST00000309422 IFI27L1Q96BM0 104 aa12.62□□□□□ -0.39
VEGFB-201ENST00000309422 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
VEGFB-201ENST00000309422 FAT1Q14517 4588 aa12.62□□□□□ -0.39
VEGFB-201ENST00000309422 IGLV5-45A0A087WSX0 123 aa12.61□□□□□ -0.39
VEGFB-201ENST00000309422 SCO1O75880 301 aa12.61□□□□□ -0.39
VEGFB-201ENST00000309422 INAFM2P0DMQ5 153 aa12.61□□□□□ -0.39
VEGFB-201ENST00000309422 UNQ6190/PRO20217Q6UXQ8 127 aa12.61□□□□□ -0.39
VEGFB-201ENST00000309422 KIAA0087Q14695 138 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms