RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 COX6A2Q02221 97 aa14.38□□□□□ -0.11
SNUPN-201ENST00000308588 GVQW2A0A096LPI5 108 aaPredicted RBP14.37□□□□□ -0.11
SNUPN-201ENST00000308588 IGHV1-58A0A0C4DH39 117 aa14.37□□□□□ -0.11
SNUPN-201ENST00000308588 SLPIP03973 132 aa14.37□□□□□ -0.11
SNUPN-201ENST00000308588 HIGD2BQ4VC39 106 aa14.37□□□□□ -0.11
SNUPN-201ENST00000308588 PDZD11Q5EBL8 140 aa14.37□□□□□ -0.11
SNUPN-201ENST00000308588 LINC01620Q4KN68 170 aa14.36□□□□□ -0.11
SNUPN-201ENST00000308588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.36□□□□□ -0.11
SNUPN-201ENST00000308588 MALP21145 153 aa14.36□□□□□ -0.11
SNUPN-201ENST00000308588 LINC00310P59036 64 aa14.36□□□□□ -0.11
SNUPN-201ENST00000308588 FAM19A3Q7Z5A8 133 aa14.36□□□□□ -0.11
SNUPN-201ENST00000308588 KIAA1109Q2LD37 5005 aa14.35□□□□□ -0.11
SNUPN-201ENST00000308588 CNBPP62633 177 aaKnown RBP14.35□□□□□ -0.11
SNUPN-201ENST00000308588 CST9LQ9H4G1 147 aa14.34□□□□□ -0.11
SNUPN-201ENST00000308588 HSBP1O75506 76 aa14.33□□□□□ -0.12
SNUPN-201ENST00000308588 SERF1AO75920 110 aa14.33□□□□□ -0.12
SNUPN-201ENST00000308588 APOBP04114 4563 aaKnown RBP14.33□□□□□ -0.12
SNUPN-201ENST00000308588 PMVKQ15126 192 aa14.32□□□□□ -0.12
SNUPN-201ENST00000308588 FAM19A2Q8N3H0 131 aa14.32□□□□□ -0.12
SNUPN-201ENST00000308588 C9orf163Q8N9P6 203 aa14.32□□□□□ -0.12
SNUPN-201ENST00000308588 LINC00526Q96FQ7 95 aa14.32□□□□□ -0.12
SNUPN-201ENST00000308588 A0A087WZ39 114 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BKO60814 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BJP06899 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BOP23527 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BBP33778 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BDP58876 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BCP62807 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST2H2BEQ16778 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BHQ93079 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BNQ99877 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 HIST1H2BMQ99879 126 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 A0A0J9YXV3 536 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 NUPR1O60356 82 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 ATP5LO75964 103 aa14.31□□□□□ -0.12
SNUPN-201ENST00000308588 DNAH8Q96JB1 4490 aa14.3□□□□□ -0.12
SNUPN-201ENST00000308588 APOMO95445 188 aa14.3□□□□□ -0.12
SNUPN-201ENST00000308588 IGHV3-64A0A075B6Q5 118 aa14.29□□□□□ -0.12
SNUPN-201ENST00000308588 ZNF561-AS1K7EIQ3 104 aa14.29□□□□□ -0.12
SNUPN-201ENST00000308588 CDK2AP2O75956 126 aa14.29□□□□□ -0.12
SNUPN-201ENST00000308588 SEC11AP67812 179 aa14.29□□□□□ -0.12
SNUPN-201ENST00000308588 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.28□□□□□ -0.12
SNUPN-201ENST00000308588 HERVK_113P63121 156 aa14.28□□□□□ -0.12
SNUPN-201ENST00000308588 FAM30AQ9NZY2 134 aa14.28□□□□□ -0.12
SNUPN-201ENST00000308588 IGLV4-69A0A075B6H9 119 aa14.27□□□□□ -0.12
SNUPN-201ENST00000308588 GEMIN7Q9H840 131 aaKnown RBP14.27□□□□□ -0.12
SNUPN-201ENST00000308588 RYR1P21817 5038 aa14.26□□□□□ -0.13
SNUPN-201ENST00000308588 TINCRA0A1B0GVN0 87 aa14.26□□□□□ -0.13
SNUPN-201ENST00000308588 NDUFA6P56556 154 aa14.26□□□□□ -0.13
SNUPN-201ENST00000308588 LINC01561Q8N1V8 128 aa14.26□□□□□ -0.13
SNUPN-201ENST00000308588 OR10D4PQ8NGN7 298 aa14.26□□□□□ -0.13
SNUPN-201ENST00000308588 ORAOV1Q8WV07 137 aa14.26□□□□□ -0.13
SNUPN-201ENST00000308588 CDKN2A-AS1Q9UH64 79 aa14.26□□□□□ -0.13
SNUPN-201ENST00000308588 SPAG11BQ08648 103 aa14.25□□□□□ -0.13
SNUPN-201ENST00000308588 Q6ZSA8 131 aa14.25□□□□□ -0.13
SNUPN-201ENST00000308588 IFI27L1Q96BM0 104 aa14.25□□□□□ -0.13
SNUPN-201ENST00000308588 HSPG2P98160 4391 aa14.25□□□□□ -0.13
SNUPN-201ENST00000308588 XGP55808 180 aa14.24□□□□□ -0.13
SNUPN-201ENST00000308588 SDIM1Q6ZPB5 146 aa14.24□□□□□ -0.13
SNUPN-201ENST00000308588 IGLV5-45A0A087WSX0 123 aa14.23□□□□□ -0.13
SNUPN-201ENST00000308588 C2orf48Q96LS8 159 aa14.23□□□□□ -0.13
SNUPN-201ENST00000308588 SYCNQ0VAF6 134 aa14.22□□□□□ -0.13
SNUPN-201ENST00000308588 LINC00469Q8N7U9 141 aa14.22□□□□□ -0.13
SNUPN-201ENST00000308588 IGLC3P0DOY3 106 aa14.21□□□□□ -0.13
SNUPN-201ENST00000308588 KIAA0087Q14695 138 aa14.21□□□□□ -0.13
SNUPN-201ENST00000308588 CARD19Q96LW7 228 aa14.21□□□□□ -0.13
SNUPN-201ENST00000308588 LEPROTL1O95214 131 aa14.2□□□□□ -0.14
SNUPN-201ENST00000308588 CAMK2N2Q96S95 79 aa14.2□□□□□ -0.14
SNUPN-201ENST00000308588 Q6ZRU5 148 aa14.2□□□□□ -0.14
SNUPN-201ENST00000308588 HAMPP81172 84 aa14.19□□□□□ -0.14
SNUPN-201ENST00000308588 CHAC1Q9BUX1 264 aa14.19□□□□□ -0.14
SNUPN-201ENST00000308588 TRAV12-1A0A0B4J245 112 aa14.18□□□□□ -0.14
SNUPN-201ENST00000308588 PACRGQ96M98 296 aaPredicted RBP14.18□□□□□ -0.14
SNUPN-201ENST00000308588 HERC2O95714 4834 aa14.18□□□□□ -0.14
SNUPN-201ENST00000308588 FABP4P15090 132 aa14.17□□□□□ -0.14
SNUPN-201ENST00000308588 COA6Q5JTJ3 125 aaKnown RBP14.17□□□□□ -0.14
SNUPN-201ENST00000308588 SMIM1B2RUZ4 78 aa14.16□□□□□ -0.14
SNUPN-201ENST00000308588 F8WDY8 70 aa14.16□□□□□ -0.14
SNUPN-201ENST00000308588 CHTOPQ9Y3Y2 248 aaKnown RBP14.16□□□□□ -0.14
SNUPN-201ENST00000308588 PANO1I0J062 215 aa14.15□□□□□ -0.14
SNUPN-201ENST00000308588 HSPB8Q9UJY1 196 aa14.15□□□□□ -0.14
SNUPN-201ENST00000308588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.15□□□□□ -0.14
SNUPN-201ENST00000308588 C11orf86A6NJI1 115 aa14.15□□□□□ -0.14
SNUPN-201ENST00000308588 ZNF22P17026 224 aaPredicted RBP14.15□□□□□ -0.14
SNUPN-201ENST00000308588 C10orf25Q5T742 122 aa14.15□□□□□ -0.14
SNUPN-201ENST00000308588 UNQ6190/PRO20217Q6UXQ8 127 aa14.15□□□□□ -0.14
SNUPN-201ENST00000308588 TOMM7Q9P0U1 55 aa14.15□□□□□ -0.14
SNUPN-201ENST00000308588 NDUFA1O15239 70 aa14.14□□□□□ -0.15
SNUPN-201ENST00000308588 SPINK8P0C7L1 97 aa14.14□□□□□ -0.15
SNUPN-201ENST00000308588 Q8IZM0 81 aa14.14□□□□□ -0.15
SNUPN-201ENST00000308588 KRTAP17-1Q9BYP8 105 aa14.14□□□□□ -0.15
SNUPN-201ENST00000308588 MRPL35Q9NZE8 188 aaKnown RBP14.14□□□□□ -0.15
SNUPN-201ENST00000308588 H3BRM9 83 aa14.13□□□□□ -0.15
SNUPN-201ENST00000308588 C2orf82Q6UX34 121 aa14.13□□□□□ -0.15
SNUPN-201ENST00000308588 SCXQ7RTU7 201 aa14.13□□□□□ -0.15
SNUPN-201ENST00000308588 CHTF8P0CG12 524 aa14.12□□□□□ -0.15
SNUPN-201ENST00000308588 CIRBPQ14011 172 aaKnown RBP14.12□□□□□ -0.15
SNUPN-201ENST00000308588 RNF151Q2KHN1 245 aa14.12□□□□□ -0.15
SNUPN-201ENST00000308588 F8VRH5 84 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms