RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
PCDHGC3-201ENST00000308177 BEAN1Q3B7T3 259 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 KIF25-AS1Q9Y6Z4 181 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 IGLV4-69A0A075B6H9 119 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 G3V4G9 280 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 UBE2BP63146 152 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 VPS13AQ96RL7 3174 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 ETDCA0A1B0GVM5 59 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 TIMM17BO60830 172 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 IGHV4-30-4P0DP06 118 aa8.24□□□□□ -1.09
PCDHGC3-201ENST00000308177 SPATA25Q9BR10 227 aa8.23□□□□□ -1.09
PCDHGC3-201ENST00000308177 CHCHD7Q9BUK0 85 aa8.23□□□□□ -1.09
PCDHGC3-201ENST00000308177 FAM19A4Q96LR4 140 aa8.23□□□□□ -1.09
PCDHGC3-201ENST00000308177 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
PCDHGC3-201ENST00000308177 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
PCDHGC3-201ENST00000308177 DEFB105AQ8NG35 78 aa8.22□□□□□ -1.09
PCDHGC3-201ENST00000308177 TRIAP1O43715 76 aa8.22□□□□□ -1.09
PCDHGC3-201ENST00000308177 Q6ZSN1 163 aa8.22□□□□□ -1.09
PCDHGC3-201ENST00000308177 F8P00451 2351 aa8.22□□□□□ -1.09
PCDHGC3-201ENST00000308177 CD164L2Q6UWJ8 174 aa8.21□□□□□ -1.09
PCDHGC3-201ENST00000308177 DIRC1Q969H9 104 aa8.21□□□□□ -1.09
PCDHGC3-201ENST00000308177 TRBV30A0A0K0K1B3 111 aa8.21□□□□□ -1.1
PCDHGC3-201ENST00000308177 KPRPQ5T749 579 aaPredicted RBP8.21□□□□□ -1.1
PCDHGC3-201ENST00000308177 LELP1Q5T871 98 aa8.21□□□□□ -1.1
PCDHGC3-201ENST00000308177 CLUHP3Q96NS8 147 aa8.2□□□□□ -1.1
PCDHGC3-201ENST00000308177 RBMY1FQ15415 496 aaKnown RBP8.2□□□□□ -1.1
PCDHGC3-201ENST00000308177 POM121L12Q8N7R1 296 aa8.2□□□□□ -1.1
PCDHGC3-201ENST00000308177 FSHBP01225 129 aa8.2□□□□□ -1.1
PCDHGC3-201ENST00000308177 LINC00694P0DN24 101 aa8.2□□□□□ -1.1
PCDHGC3-201ENST00000308177 LINC00315P59091 139 aa8.2□□□□□ -1.1
PCDHGC3-201ENST00000308177 AMELXQ99217 191 aa8.2□□□□□ -1.1
PCDHGC3-201ENST00000308177 JMJD7-PLA2G4BH0Y9G9 81 aa8.19□□□□□ -1.1
PCDHGC3-201ENST00000308177 FHL2Q14192 279 aa8.19□□□□□ -1.1
PCDHGC3-201ENST00000308177 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
PCDHGC3-201ENST00000308177 KLK5Q9Y337 293 aaPredicted RBP8.18□□□□□ -1.1
PCDHGC3-201ENST00000308177 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
PCDHGC3-201ENST00000308177 C11orf72Q8NBR9 251 aa8.18□□□□□ -1.1
PCDHGC3-201ENST00000308177 CITED1Q99966 193 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 FHL3Q13643 280 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 C9orf153Q5TBE3 101 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 CSDC2Q9Y534 153 aaKnown RBP8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 TMEM256-PLSCR3K7ERE1 68 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 LINC01546A6NGU7 62 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 CDK2AP2O75956 126 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 LAMA1P25391 3075 aa8.17□□□□□ -1.1
PCDHGC3-201ENST00000308177 TRAV10A0A0B4J240 114 aa8.16□□□□□ -1.1
PCDHGC3-201ENST00000308177 TEX49A0A1B0GTD5 131 aa8.16□□□□□ -1.1
PCDHGC3-201ENST00000308177 H3BQ85 93 aa8.16□□□□□ -1.1
PCDHGC3-201ENST00000308177 LINC00526Q96FQ7 95 aa8.16□□□□□ -1.1
PCDHGC3-201ENST00000308177 MUC4Q99102 2169 aa8.16□□□□□ -1.1
PCDHGC3-201ENST00000308177 IGLV4-60A0A075B6I1 120 aa8.15□□□□□ -1.1
PCDHGC3-201ENST00000308177 COX7BP24311 80 aa8.15□□□□□ -1.1
PCDHGC3-201ENST00000308177 COX6A2Q02221 97 aa8.15□□□□□ -1.1
PCDHGC3-201ENST00000308177 TRACP01848 142 aa8.15□□□□□ -1.1
PCDHGC3-201ENST00000308177 PRB2P02812 416 aaPredicted RBP8.14□□□□□ -1.11
PCDHGC3-201ENST00000308177 RBM3P98179 157 aaKnown RBP8.14□□□□□ -1.11
PCDHGC3-201ENST00000308177 FUSP35637 526 aaKnown RBP eCLIP8.14□□□□□ -1.11
PCDHGC3-201ENST00000308177 Q8IZM0 81 aa8.14□□□□□ -1.11
PCDHGC3-201ENST00000308177 C14orf132Q9NPU4 83 aa8.14□□□□□ -1.11
PCDHGC3-201ENST00000308177 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
PCDHGC3-201ENST00000308177 IGKV3D-7A0A0C4DH55 119 aa8.13□□□□□ -1.11
PCDHGC3-201ENST00000308177 AKAP13Q12802 2813 aa8.13□□□□□ -1.11
PCDHGC3-201ENST00000308177 hADV29S1A0JD25 119 aa8.13□□□□□ -1.11
PCDHGC3-201ENST00000308177 A0A0J9YWU9 116 aa8.13□□□□□ -1.11
PCDHGC3-201ENST00000308177 NANOS2P60321 138 aaKnown RBP8.13□□□□□ -1.11
PCDHGC3-201ENST00000308177 SYCNQ0VAF6 134 aa8.13□□□□□ -1.11
PCDHGC3-201ENST00000308177 RETNQ9HD89 108 aa8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 DSPP15924 2871 aaKnown RBP8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 A0A087WZ39 114 aa8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 C6orf99Q4VX62 202 aa8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 IGKV2-24A0A0C4DH68 120 aa8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 LST1O00453 97 aa8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 RNF183Q96D59 192 aa8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 VCANP13611 3396 aa8.12□□□□□ -1.11
PCDHGC3-201ENST00000308177 A0A096LNT2 108 aa8.11□□□□□ -1.11
PCDHGC3-201ENST00000308177 IL17DQ8TAD2 202 aa8.11□□□□□ -1.11
PCDHGC3-201ENST00000308177 CFAP46Q8IYW2 2715 aa8.11□□□□□ -1.11
PCDHGC3-201ENST00000308177 SLPIP03973 132 aa8.11□□□□□ -1.11
PCDHGC3-201ENST00000308177 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
PCDHGC3-201ENST00000308177 C14orf177Q52M58 125 aa8.1□□□□□ -1.11
PCDHGC3-201ENST00000308177 ITPR3Q14573 2671 aa8.1□□□□□ -1.11
PCDHGC3-201ENST00000308177 FAM236AA0A1B0GUQ0 79 aa8.09□□□□□ -1.11
PCDHGC3-201ENST00000308177 FAM236BA0A1B0GV22 79 aa8.09□□□□□ -1.11
PCDHGC3-201ENST00000308177 PDE6GP18545 87 aa8.09□□□□□ -1.11
PCDHGC3-201ENST00000308177 COX17Q14061 63 aa8.09□□□□□ -1.11
PCDHGC3-201ENST00000308177 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
PCDHGC3-201ENST00000308177 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.11
PCDHGC3-201ENST00000308177 HELZ2Q9BYK8 2649 aaKnown RBP8.09□□□□□ -1.11
PCDHGC3-201ENST00000308177 CYSRT1A8MQ03 144 aa8.08□□□□□ -1.12
PCDHGC3-201ENST00000308177 Q6ZTC4 211 aa8.08□□□□□ -1.12
PCDHGC3-201ENST00000308177 A0A1B0GUV1 79 aa8.08□□□□□ -1.12
PCDHGC3-201ENST00000308177 NREPQ16612 68 aa8.08□□□□□ -1.12
PCDHGC3-201ENST00000308177 UBE2AP49459 152 aa8.08□□□□□ -1.12
PCDHGC3-201ENST00000308177 Q9UF83 564 aa8.08□□□□□ -1.12
PCDHGC3-201ENST00000308177 DNAH14Q0VDD8 3507 aa8.07□□□□□ -1.12
PCDHGC3-201ENST00000308177 UNQ6190/PRO20217Q6UXQ8 127 aa8.07□□□□□ -1.12
PCDHGC3-201ENST00000308177 MT-ATP8P03928 68 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms