RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
TRIM56-201ENST00000306085 ZNF73O43830 326 aaPredicted RBP10.04□□□□□ -0.8
TRIM56-201ENST00000306085 C11orf53Q8IXP5 236 aa10.04□□□□□ -0.8
TRIM56-201ENST00000306085 NAV2Q8IVL1 2488 aa10.03□□□□□ -0.8
TRIM56-201ENST00000306085 XGP55808 180 aa10.03□□□□□ -0.8
TRIM56-201ENST00000306085 LINC01547P58512 204 aaPredicted RBP10.03□□□□□ -0.8
TRIM56-201ENST00000306085 PRLHP81277 87 aa10.03□□□□□ -0.8
TRIM56-201ENST00000306085 SPAG11AQ6PDA7 123 aa10.03□□□□□ -0.8
TRIM56-201ENST00000306085 MAPKAPK5-AS1Q8N8E1 139 aa10.03□□□□□ -0.8
TRIM56-201ENST00000306085 TRBV6-8A0A0A6YYG3 113 aa10.02□□□□□ -0.8
TRIM56-201ENST00000306085 RSPO1Q2MKA7 263 aaPredicted RBP10.02□□□□□ -0.8
TRIM56-201ENST00000306085 SPINT4Q6UDR6 99 aa10.02□□□□□ -0.81
TRIM56-201ENST00000306085 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
TRIM56-201ENST00000306085 LINC00322Q6ZN03 302 aaPredicted RBP10.02□□□□□ -0.81
TRIM56-201ENST00000306085 LTBP1Q14766 1721 aa10.01□□□□□ -0.81
TRIM56-201ENST00000306085 Q6JHZ5 121 aa10.01□□□□□ -0.81
TRIM56-201ENST00000306085 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
TRIM56-201ENST00000306085 LST1O00453 97 aa10□□□□□ -0.81
TRIM56-201ENST00000306085 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
TRIM56-201ENST00000306085 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
TRIM56-201ENST00000306085 ZNF80P51504 273 aaPredicted RBP10□□□□□ -0.81
TRIM56-201ENST00000306085 LOC107984640A0A0U1RRK4 108 aa10□□□□□ -0.81
TRIM56-201ENST00000306085 H0Y9P7 68 aa10□□□□□ -0.81
TRIM56-201ENST00000306085 E7EUB6 86 aa9.99□□□□□ -0.81
TRIM56-201ENST00000306085 USP9YO00507 2555 aaPredicted RBP9.99□□□□□ -0.81
TRIM56-201ENST00000306085 TMEM89A2RUT3 159 aa9.98□□□□□ -0.81
TRIM56-201ENST00000306085 PRO0628Q9UI54 55 aa9.98□□□□□ -0.81
TRIM56-201ENST00000306085 GDF5OSQ5U4N7 250 aa9.98□□□□□ -0.81
TRIM56-201ENST00000306085 LY6G6CO95867 125 aa9.98□□□□□ -0.81
TRIM56-201ENST00000306085 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
TRIM56-201ENST00000306085 COX17Q14061 63 aa9.97□□□□□ -0.81
TRIM56-201ENST00000306085 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
TRIM56-201ENST00000306085 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
TRIM56-201ENST00000306085 PROK1P58294 105 aa9.96□□□□□ -0.81
TRIM56-201ENST00000306085 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.81
TRIM56-201ENST00000306085 ZNF843Q8N446 348 aa9.96□□□□□ -0.81
TRIM56-201ENST00000306085 NRACQ8N912 160 aa9.96□□□□□ -0.81
TRIM56-201ENST00000306085 CCDC140Q96MF4 163 aa9.95□□□□□ -0.82
TRIM56-201ENST00000306085 C1orf137Q5JT78 98 aa9.95□□□□□ -0.82
TRIM56-201ENST00000306085 ZNF524Q96C55 264 aa9.95□□□□□ -0.82
TRIM56-201ENST00000306085 IGLV4-69A0A075B6H9 119 aa9.95□□□□□ -0.82
TRIM56-201ENST00000306085 M0QY20 66 aa9.95□□□□□ -0.82
TRIM56-201ENST00000306085 IGLV3-1P01715 115 aa9.95□□□□□ -0.82
TRIM56-201ENST00000306085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.95□□□□□ -0.82
TRIM56-201ENST00000306085 C7orf65Q6ZTY9 151 aa9.95□□□□□ -0.82
TRIM56-201ENST00000306085 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
TRIM56-201ENST00000306085 RNASE3P12724 160 aaKnown RBP9.94□□□□□ -0.82
TRIM56-201ENST00000306085 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
TRIM56-201ENST00000306085 A0A087WVE0 104 aa9.94□□□□□ -0.82
TRIM56-201ENST00000306085 LINC00482Q8N8I6 264 aa9.93□□□□□ -0.82
TRIM56-201ENST00000306085 BBC3Q96PG8 261 aaPredicted RBP9.93□□□□□ -0.82
TRIM56-201ENST00000306085 Q9UF83 564 aa9.93□□□□□ -0.82
TRIM56-201ENST00000306085 KPRPQ5T749 579 aaPredicted RBP9.92□□□□□ -0.82
TRIM56-201ENST00000306085 DAZAP2Q15038 168 aaPredicted RBP9.92□□□□□ -0.82
TRIM56-201ENST00000306085 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
TRIM56-201ENST00000306085 RPL28P46779 137 aaKnown RBP9.92□□□□□ -0.82
TRIM56-201ENST00000306085 DEFB116Q30KQ4 102 aa9.92□□□□□ -0.82
TRIM56-201ENST00000306085 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
TRIM56-201ENST00000306085 IGKV2D-30A0A075B6S6 120 aa9.91□□□□□ -0.82
TRIM56-201ENST00000306085 IGKV2-30P06310 120 aa9.91□□□□□ -0.82
TRIM56-201ENST00000306085 TRAV10A0A0B4J240 114 aa9.91□□□□□ -0.82
TRIM56-201ENST00000306085 FASNP49327 2511 aaKnown RBP9.91□□□□□ -0.82
TRIM56-201ENST00000306085 Q8N7P7 452 aa9.91□□□□□ -0.82
TRIM56-201ENST00000306085 LINC01548A6NM66 108 aa9.9□□□□□ -0.82
TRIM56-201ENST00000306085 Q8N3U1 123 aa9.9□□□□□ -0.82
TRIM56-201ENST00000306085 TNFRSF13BO14836 293 aaPredicted RBP9.9□□□□□ -0.82
TRIM56-201ENST00000306085 Q6ZSR3 168 aa9.89□□□□□ -0.83
TRIM56-201ENST00000306085 Q8N814 137 aa9.89□□□□□ -0.83
TRIM56-201ENST00000306085 A0A1B0GU69 56 aa9.89□□□□□ -0.83
TRIM56-201ENST00000306085 U3KQA8 63 aa9.89□□□□□ -0.83
TRIM56-201ENST00000306085 IGLV2-14P01704 120 aa9.89□□□□□ -0.83
TRIM56-201ENST00000306085 PRORYQ9H606 182 aa9.88□□□□□ -0.83
TRIM56-201ENST00000306085 DEFB114Q30KQ6 69 aa9.88□□□□□ -0.83
TRIM56-201ENST00000306085 TSHBP01222 138 aa9.88□□□□□ -0.83
TRIM56-201ENST00000306085 Q6ZS46 218 aa9.88□□□□□ -0.83
TRIM56-201ENST00000306085 IGF2RP11717 2491 aa9.87□□□□□ -0.83
TRIM56-201ENST00000306085 C2orf91Q6ZV80 131 aa9.87□□□□□ -0.83
TRIM56-201ENST00000306085 MSMPQ1L6U9 139 aa9.87□□□□□ -0.83
TRIM56-201ENST00000306085 LINC00575Q6W349 94 aa9.87□□□□□ -0.83
TRIM56-201ENST00000306085 MBD6Q96DN6 1003 aa9.87□□□□□ -0.83
TRIM56-201ENST00000306085 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
TRIM56-201ENST00000306085 TRBV6-4A0A1B0GX49 114 aa9.87□□□□□ -0.83
TRIM56-201ENST00000306085 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
TRIM56-201ENST00000306085 U3KQK5 164 aa9.86□□□□□ -0.83
TRIM56-201ENST00000306085 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
TRIM56-201ENST00000306085 Q9BRP9 147 aa9.86□□□□□ -0.83
TRIM56-201ENST00000306085 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
TRIM56-201ENST00000306085 IGLV8-61A0A075B6I0 122 aa9.85□□□□□ -0.83
TRIM56-201ENST00000306085 RNF185Q96GF1 192 aa9.85□□□□□ -0.83
TRIM56-201ENST00000306085 HCG22E2RYF7 251 aa9.85□□□□□ -0.83
TRIM56-201ENST00000306085 A0A087WYN8 130 aa9.85□□□□□ -0.83
TRIM56-201ENST00000306085 IGLV2-8P01709 118 aa9.85□□□□□ -0.83
TRIM56-201ENST00000306085 LELP1Q5T871 98 aa9.85□□□□□ -0.83
TRIM56-201ENST00000306085 PRR3P79522 188 aaKnown RBP9.84□□□□□ -0.83
TRIM56-201ENST00000306085 CYSRT1A8MQ03 144 aa9.84□□□□□ -0.83
TRIM56-201ENST00000306085 Q8N6K4 173 aa9.84□□□□□ -0.83
TRIM56-201ENST00000306085 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
TRIM56-201ENST00000306085 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
TRIM56-201ENST00000306085 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
TRIM56-201ENST00000306085 TRBV10-3A0A0K0K1G6 114 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms