RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 E9PLD3 99 aa6.6□□□□□ -1.35
PTPRE-202ENST00000306042 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
PTPRE-202ENST00000306042 IGLC3P0DOY3 106 aa6.59□□□□□ -1.35
PTPRE-202ENST00000306042 RBMY1FQ15415 496 aaKnown RBP6.59□□□□□ -1.35
PTPRE-202ENST00000306042 LYPD5Q6UWN5 251 aa6.59□□□□□ -1.35
PTPRE-202ENST00000306042 NRACQ8N912 160 aa6.59□□□□□ -1.35
PTPRE-202ENST00000306042 K7EIL1 84 aa6.59□□□□□ -1.35
PTPRE-202ENST00000306042 CFAP54Q96N23 3096 aa6.59□□□□□ -1.35
PTPRE-202ENST00000306042 IGLV4-69A0A075B6H9 119 aa6.59□□□□□ -1.35
PTPRE-202ENST00000306042 LOC105371267A0A1B0GV96 52 aa6.59□□□□□ -1.35
PTPRE-202ENST00000306042 FAM19A5Q7Z5A7 132 aaPredicted RBP6.59□□□□□ -1.36
PTPRE-202ENST00000306042 KLK9Q2XQG4 91 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 COX8CQ7Z4L0 72 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 CEND1Q8N111 149 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 LINC00526Q96FQ7 95 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 UBE2D4Q9Y2X8 147 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 WFDC10BQ8IUB3 73 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 X6R8D5 127 aa6.58□□□□□ -1.36
PTPRE-202ENST00000306042 C9JAW5 83 aa6.57□□□□□ -1.36
PTPRE-202ENST00000306042 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
PTPRE-202ENST00000306042 PTH2Q96A98 100 aa6.57□□□□□ -1.36
PTPRE-202ENST00000306042 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
PTPRE-202ENST00000306042 GCN1Q92616 2671 aaKnown RBP6.57□□□□□ -1.36
PTPRE-202ENST00000306042 DIRC1Q969H9 104 aa6.57□□□□□ -1.36
PTPRE-202ENST00000306042 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
PTPRE-202ENST00000306042 PLA2G1BP04054 148 aaKnown RBP6.57□□□□□ -1.36
PTPRE-202ENST00000306042 KRTAP10-11P60412 298 aa6.57□□□□□ -1.36
PTPRE-202ENST00000306042 MRPS36P82909 103 aaKnown RBP6.57□□□□□ -1.36
PTPRE-202ENST00000306042 C11orf72Q8NBR9 251 aa6.56□□□□□ -1.36
PTPRE-202ENST00000306042 CDC42SE2Q9NRR3 84 aa6.56□□□□□ -1.36
PTPRE-202ENST00000306042 F8WDY8 70 aa6.56□□□□□ -1.36
PTPRE-202ENST00000306042 ZNF22P17026 224 aaPredicted RBP6.56□□□□□ -1.36
PTPRE-202ENST00000306042 STAB1Q9NY15 2570 aa6.56□□□□□ -1.36
PTPRE-202ENST00000306042 J3QL48 77 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 NPSP0C0P6 89 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 DSCR8Q96T75 97 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 TTTY13Q9BZ97 58 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 TRBV20-1A0A075B6N2 111 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 CFC1P0CG37 223 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 A4D1N5 150 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 GAS8-AS1O95177 125 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 FAM19A1Q7Z5A9 133 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 IBA57-AS1B1ANH7 110 aa6.55□□□□□ -1.36
PTPRE-202ENST00000306042 VCANP13611 3396 aa6.54□□□□□ -1.36
PTPRE-202ENST00000306042 H0YGX0 51 aa6.54□□□□□ -1.36
PTPRE-202ENST00000306042 COL6A5A8TX70 2615 aa6.54□□□□□ -1.36
PTPRE-202ENST00000306042 C6orf223Q8N319 242 aa6.54□□□□□ -1.36
PTPRE-202ENST00000306042 Q8NAQ8 132 aa6.54□□□□□ -1.36
PTPRE-202ENST00000306042 USP17L23D6RBM5 183 aa6.54□□□□□ -1.36
PTPRE-202ENST00000306042 Q6ZSN1 163 aa6.54□□□□□ -1.36
PTPRE-202ENST00000306042 A0A1B0GV90 55 aa6.53□□□□□ -1.36
PTPRE-202ENST00000306042 C9orf153Q5TBE3 101 aa6.53□□□□□ -1.36
PTPRE-202ENST00000306042 IGLV4-60A0A075B6I1 120 aa6.53□□□□□ -1.36
PTPRE-202ENST00000306042 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
PTPRE-202ENST00000306042 ORMDL1Q9P0S3 153 aa6.53□□□□□ -1.36
PTPRE-202ENST00000306042 INAFM2P0DMQ5 153 aa6.52□□□□□ -1.36
PTPRE-202ENST00000306042 SPATA12Q7Z6I5 190 aa6.52□□□□□ -1.36
PTPRE-202ENST00000306042 TMEM223A0PJW6 202 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 VPS13AQ96RL7 3174 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 C16orf90A8MZG2 172 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 ESRGQ1W209 222 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 H3BNG1 76 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 K7ERJ3 54 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 COX7BP24311 80 aa6.52□□□□□ -1.37
PTPRE-202ENST00000306042 A0A0J9YXY3 114 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 NDUFB1O75438 58 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 REG3GQ6UW15 175 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 NTN5Q8WTR8 489 aaPredicted RBP6.51□□□□□ -1.37
PTPRE-202ENST00000306042 CYSRT1A8MQ03 144 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 A0A1B0GUV1 79 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 LINC00694P0DN24 101 aa6.51□□□□□ -1.37
PTPRE-202ENST00000306042 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
PTPRE-202ENST00000306042 C19orf73Q9NVV2 129 aa6.5□□□□□ -1.37
PTPRE-202ENST00000306042 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
PTPRE-202ENST00000306042 TEX15Q9BXT5 2789 aa6.5□□□□□ -1.37
PTPRE-202ENST00000306042 EGFEM1PQ0D2K5 195 aa6.5□□□□□ -1.37
PTPRE-202ENST00000306042 Q8IZM0 81 aa6.5□□□□□ -1.37
PTPRE-202ENST00000306042 RPL28P46779 137 aaKnown RBP6.49□□□□□ -1.37
PTPRE-202ENST00000306042 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 FLNCQ14315 2725 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 CR1P17927 2039 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 FRYLO94915 3013 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
PTPRE-202ENST00000306042 MUC4Q99102 2169 aa6.49□□□□□ -1.37
PTPRE-202ENST00000306042 A8MZ25 164 aa6.48□□□□□ -1.37
PTPRE-202ENST00000306042 LAMA1P25391 3075 aa6.48□□□□□ -1.37
PTPRE-202ENST00000306042 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
PTPRE-202ENST00000306042 SPANXB1Q9NS25 103 aaPredicted RBP6.48□□□□□ -1.37
PTPRE-202ENST00000306042 HIGD1BQ9P298 99 aa6.48□□□□□ -1.37
PTPRE-202ENST00000306042 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
PTPRE-202ENST00000306042 HIST1H4AP62805 103 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms