RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TRAV8-3A0A0A6YYJ7 113 aa8.85□□□□□ -0.99
CCDC7-202ENST00000302316 LEPROTO15243 131 aa8.85□□□□□ -0.99
CCDC7-202ENST00000302316 J3QQQ9 107 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 CCL18P55774 89 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 MAPKAPK5-AS1Q8N8E1 139 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 IGHV1-58A0A0C4DH39 117 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 CCL25O15444 150 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
CCDC7-202ENST00000302316 CTAG1AP78358 180 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 LINC00588Q9Y4M8 146 aa8.84□□□□□ -0.99
CCDC7-202ENST00000302316 ZNF815PA8K554 130 aa8.83□□□□□ -1
CCDC7-202ENST00000302316 XCL1P47992 114 aa8.83□□□□□ -1
CCDC7-202ENST00000302316 C2orf91Q6ZV80 131 aa8.83□□□□□ -1
CCDC7-202ENST00000302316 PLEKHB2Q96CS7 222 aa8.83□□□□□ -1
CCDC7-202ENST00000302316 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
CCDC7-202ENST00000302316 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
CCDC7-202ENST00000302316 CRPP02741 224 aa8.83□□□□□ -1
CCDC7-202ENST00000302316 IGLV10-54A0A075B6I4 117 aa8.82□□□□□ -1
CCDC7-202ENST00000302316 IGHV3OR16-9A0A0B4J2B5 98 aa8.82□□□□□ -1
CCDC7-202ENST00000302316 NUPR2A6NF83 97 aa8.82□□□□□ -1
CCDC7-202ENST00000302316 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
CCDC7-202ENST00000302316 PRR34Q9NV39 138 aa8.82□□□□□ -1
CCDC7-202ENST00000302316 FBN3Q75N90 2809 aa8.81□□□□□ -1
CCDC7-202ENST00000302316 LINC01556Q5JQF7 62 aa8.81□□□□□ -1
CCDC7-202ENST00000302316 SIVA1O15304 175 aa8.81□□□□□ -1
CCDC7-202ENST00000302316 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
CCDC7-202ENST00000302316 UBE2WQ96B02 151 aa8.81□□□□□ -1
CCDC7-202ENST00000302316 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
CCDC7-202ENST00000302316 ENHOQ6UWT2 76 aa8.8□□□□□ -1
CCDC7-202ENST00000302316 C5orf38Q86SI9 138 aa8.8□□□□□ -1
CCDC7-202ENST00000302316 KLK5Q9Y337 293 aaPredicted RBP8.8□□□□□ -1
CCDC7-202ENST00000302316 DNAH10OSP0CZ25 163 aa8.8□□□□□ -1
CCDC7-202ENST00000302316 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
CCDC7-202ENST00000302316 APLNQ9ULZ1 77 aa8.8□□□□□ -1
CCDC7-202ENST00000302316 A0A087WZ39 114 aa8.79□□□□□ -1
CCDC7-202ENST00000302316 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
CCDC7-202ENST00000302316 UPK3BQ9BT76 320 aa8.78□□□□□ -1
CCDC7-202ENST00000302316 HIGD1BQ9P298 99 aa8.78□□□□□ -1
CCDC7-202ENST00000302316 TMEM238LA0A1B0GVL6 79 aa8.78□□□□□ -1
CCDC7-202ENST00000302316 ZFAND6Q6FIF0 208 aa8.78□□□□□ -1
CCDC7-202ENST00000302316 NDUFA12Q9UI09 145 aa8.78□□□□□ -1
CCDC7-202ENST00000302316 DYNC2H1Q8NCM8 4307 aaKnown RBP8.77□□□□□ -1
CCDC7-202ENST00000302316 COX7A2LO14548 114 aa8.77□□□□□ -1.01
CCDC7-202ENST00000302316 MIAQ16674 131 aa8.77□□□□□ -1.01
CCDC7-202ENST00000302316 TRAV8-4A0A0B4J246 113 aa8.77□□□□□ -1.01
CCDC7-202ENST00000302316 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
CCDC7-202ENST00000302316 UBE2DNLQ8IWF7 75 aa8.77□□□□□ -1.01
CCDC7-202ENST00000302316 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
CCDC7-202ENST00000302316 M0R143 59 aa8.76□□□□□ -1.01
CCDC7-202ENST00000302316 EREGO14944 169 aa8.76□□□□□ -1.01
CCDC7-202ENST00000302316 FOXI1Q12951 378 aa8.76□□□□□ -1.01
CCDC7-202ENST00000302316 BATFQ16520 125 aa8.76□□□□□ -1.01
CCDC7-202ENST00000302316 SNHG12Q9BXW3 62 aa8.76□□□□□ -1.01
CCDC7-202ENST00000302316 TOMM7Q9P0U1 55 aa8.76□□□□□ -1.01
CCDC7-202ENST00000302316 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
CCDC7-202ENST00000302316 MALP21145 153 aa8.75□□□□□ -1.01
CCDC7-202ENST00000302316 HSD52Q0P140 79 aa8.75□□□□□ -1.01
CCDC7-202ENST00000302316 LINC01561Q8N1V8 128 aa8.75□□□□□ -1.01
CCDC7-202ENST00000302316 COX7B2Q8TF08 81 aa8.75□□□□□ -1.01
CCDC7-202ENST00000302316 CSMD3Q7Z407 3707 aa8.75□□□□□ -1.01
CCDC7-202ENST00000302316 NDUFA1O15239 70 aa8.74□□□□□ -1.01
CCDC7-202ENST00000302316 Q9H8V8 135 aa8.74□□□□□ -1.01
CCDC7-202ENST00000302316 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
CCDC7-202ENST00000302316 DNAH7Q8WXX0 4024 aa8.73□□□□□ -1.01
CCDC7-202ENST00000302316 C1orf43Q9BWL3 253 aa8.73□□□□□ -1.01
CCDC7-202ENST00000302316 ORAOV1Q8WV07 137 aa8.72□□□□□ -1.01
CCDC7-202ENST00000302316 HIST1H4GQ99525 98 aa8.72□□□□□ -1.01
CCDC7-202ENST00000302316 Q9HAA7 133 aa8.72□□□□□ -1.01
CCDC7-202ENST00000302316 PRSS2P07478 247 aa8.72□□□□□ -1.01
CCDC7-202ENST00000302316 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
CCDC7-202ENST00000302316 PLECQ15149 4684 aaKnown RBP8.72□□□□□ -1.01
CCDC7-202ENST00000302316 IGKV2D-24A0A075B6R9 120 aa8.71□□□□□ -1.01
CCDC7-202ENST00000302316 IBA57-AS1B1ANH7 110 aa8.71□□□□□ -1.01
CCDC7-202ENST00000302316 GCSHP23434 173 aa8.71□□□□□ -1.01
CCDC7-202ENST00000302316 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.01
CCDC7-202ENST00000302316 TMEM238C9JI98 176 aa8.71□□□□□ -1.02
CCDC7-202ENST00000302316 APOMO95445 188 aa8.71□□□□□ -1.02
CCDC7-202ENST00000302316 SRSF9Q13242 221 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCDC7-202ENST00000302316 TAL2Q16559 108 aa8.71□□□□□ -1.02
CCDC7-202ENST00000302316 Q8IZM0 81 aa8.71□□□□□ -1.02
CCDC7-202ENST00000302316 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
CCDC7-202ENST00000302316 MUC7Q8TAX7 377 aa8.7□□□□□ -1.02
CCDC7-202ENST00000302316 SPANXB1Q9NS25 103 aaPredicted RBP8.7□□□□□ -1.02
CCDC7-202ENST00000302316 STARD9Q9P2P6 4700 aa8.7□□□□□ -1.02
CCDC7-202ENST00000302316 HERV-K104P63124 156 aa8.69□□□□□ -1.02
CCDC7-202ENST00000302316 KRTAP26-1Q6PEX3 210 aa8.69□□□□□ -1.02
CCDC7-202ENST00000302316 CEND1Q8N111 149 aa8.69□□□□□ -1.02
CCDC7-202ENST00000302316 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
CCDC7-202ENST00000302316 LYSTQ99698 3801 aa8.69□□□□□ -1.02
CCDC7-202ENST00000302316 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
CCDC7-202ENST00000302316 K7EP13 123 aa8.68□□□□□ -1.02
CCDC7-202ENST00000302316 FXYD2P54710 66 aa8.68□□□□□ -1.02
CCDC7-202ENST00000302316 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
CCDC7-202ENST00000302316 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
CCDC7-202ENST00000302316 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
CCDC7-202ENST00000302316 LITAFQ99732 161 aa8.68□□□□□ -1.02
CCDC7-202ENST00000302316 TIMM17BO60830 172 aa8.67□□□□□ -1.02
CCDC7-202ENST00000302316 PTTG1IPP53801 180 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms