RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 LRCOL1A6NCL2 159 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 CRPP02741 224 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 S100A6P06703 90 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 C3orf79P0CE67 100 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 WFDC2Q14508 124 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 ODF1Q14990 250 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 C1orf134Q5TEV5 83 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 Q6ZN92 141 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
RFX3-201ENST00000302303 GAGE12HA6NDE8 117 aa6.26□□□□□ -1.41
RFX3-201ENST00000302303 SYS1-DBNDD2H3BUS1 97 aa6.26□□□□□ -1.41
RFX3-201ENST00000302303 PRSS1P07477 247 aa6.26□□□□□ -1.41
RFX3-201ENST00000302303 XCL1P47992 114 aa6.26□□□□□ -1.41
RFX3-201ENST00000302303 PAPPA-AS1Q5QFB9 102 aa6.26□□□□□ -1.41
RFX3-201ENST00000302303 CD164L2Q6UWJ8 174 aa6.26□□□□□ -1.41
RFX3-201ENST00000302303 IGLV5-45A0A087WSX0 123 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 IGLC3P0DOY3 106 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 SS18Q15532 418 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 C1orf43Q9BWL3 253 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 MRPL35Q9NZE8 188 aaKnown RBP6.25□□□□□ -1.41
RFX3-201ENST00000302303 TINCRA0A1B0GVN0 87 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 C11orf86A6NJI1 115 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 C2orf88Q9BSF0 95 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 CDKN2A-AS1Q9UH64 79 aa6.25□□□□□ -1.41
RFX3-201ENST00000302303 LCE2BO14633 110 aa6.24□□□□□ -1.41
RFX3-201ENST00000302303 LINC01545Q5VT33 79 aa6.24□□□□□ -1.41
RFX3-201ENST00000302303 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
RFX3-201ENST00000302303 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
RFX3-201ENST00000302303 PMCHL2Q9BQD1 86 aa6.24□□□□□ -1.41
RFX3-201ENST00000302303 MAP1LC3CQ9BXW4 147 aa6.24□□□□□ -1.41
RFX3-201ENST00000302303 CHTOPQ9Y3Y2 248 aaKnown RBP6.24□□□□□ -1.41
RFX3-201ENST00000302303 A0A087WZ39 114 aa6.23□□□□□ -1.41
RFX3-201ENST00000302303 F8VRH5 84 aa6.23□□□□□ -1.41
RFX3-201ENST00000302303 H0Y8G0 127 aa6.23□□□□□ -1.41
RFX3-201ENST00000302303 ZNF22P17026 224 aaPredicted RBP6.23□□□□□ -1.41
RFX3-201ENST00000302303 RMI2Q96E14 147 aa6.23□□□□□ -1.41
RFX3-201ENST00000302303 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
RFX3-201ENST00000302303 COX11Q9Y6N1 276 aa6.23□□□□□ -1.41
RFX3-201ENST00000302303 A0A087WTM6 91 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 LECT2O14960 151 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 SLPIP03973 132 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 S100A2P29034 98 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 KRTDAPP60985 99 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 HERVK_113P63121 156 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 CHAC1Q9BUX1 264 aa6.22□□□□□ -1.41
RFX3-201ENST00000302303 KIAA0087Q14695 138 aa6.21□□□□□ -1.42
RFX3-201ENST00000302303 OR10D4PQ8NGN7 298 aa6.21□□□□□ -1.42
RFX3-201ENST00000302303 NTN5Q8WTR8 489 aaPredicted RBP6.21□□□□□ -1.42
RFX3-201ENST00000302303 SMIM1B2RUZ4 78 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 USP17L23D6RBM5 183 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 COX7A2LO14548 114 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 SEC11AP67812 179 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 LINC01561Q8N1V8 128 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 IGLV5-39A0A0G2JS06 123 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 PSCAO43653 123 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 LINC00469Q8N7U9 141 aa6.2□□□□□ -1.42
RFX3-201ENST00000302303 GEMIN7Q9H840 131 aaKnown RBP6.2□□□□□ -1.42
RFX3-201ENST00000302303 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
RFX3-201ENST00000302303 DNAH5Q8TE73 4624 aa6.19□□□□□ -1.42
RFX3-201ENST00000302303 GVQW2A0A096LPI5 108 aaPredicted RBP6.19□□□□□ -1.42
RFX3-201ENST00000302303 TMEM223A0PJW6 202 aa6.19□□□□□ -1.42
RFX3-201ENST00000302303 DPM2O94777 84 aa6.19□□□□□ -1.42
RFX3-201ENST00000302303 IGKCP01834 107 aa6.19□□□□□ -1.42
RFX3-201ENST00000302303 LINC00526Q96FQ7 95 aa6.19□□□□□ -1.42
RFX3-201ENST00000302303 HECTD4Q9Y4D8 3996 aa6.18□□□□□ -1.42
RFX3-201ENST00000302303 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
RFX3-201ENST00000302303 SPINK8P0C7L1 97 aa6.18□□□□□ -1.42
RFX3-201ENST00000302303 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFX3-201ENST00000302303 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
RFX3-201ENST00000302303 HIGD2BQ4VC39 106 aa6.18□□□□□ -1.42
RFX3-201ENST00000302303 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
RFX3-201ENST00000302303 Q8N814 137 aa6.18□□□□□ -1.42
RFX3-201ENST00000302303 LOC105371267A0A1B0GV96 52 aa6.17□□□□□ -1.42
RFX3-201ENST00000302303 PLNP26678 52 aa6.17□□□□□ -1.42
RFX3-201ENST00000302303 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
RFX3-201ENST00000302303 DYNC1H1Q14204 4646 aaKnown RBP6.17□□□□□ -1.42
RFX3-201ENST00000302303 JOSD1Q15040 202 aaPredicted RBP6.16□□□□□ -1.42
RFX3-201ENST00000302303 MAJINQ3KP22 176 aa6.16□□□□□ -1.42
RFX3-201ENST00000302303 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
RFX3-201ENST00000302303 STPG4Q8N801 248 aa6.16□□□□□ -1.42
RFX3-201ENST00000302303 ORAOV1Q8WV07 137 aa6.16□□□□□ -1.42
RFX3-201ENST00000302303 MALP21145 153 aa6.15□□□□□ -1.42
RFX3-201ENST00000302303 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
RFX3-201ENST00000302303 PYY3Q5JQD4 70 aa6.15□□□□□ -1.42
RFX3-201ENST00000302303 C10orf25Q5T742 122 aa6.15□□□□□ -1.42
RFX3-201ENST00000302303 CFAP161Q6P656 301 aa6.15□□□□□ -1.42
RFX3-201ENST00000302303 IGKV2D-26A0A0A0MRZ7 120 aa6.15□□□□□ -1.43
RFX3-201ENST00000302303 hDV102S1A0JD36 115 aa6.15□□□□□ -1.43
RFX3-201ENST00000302303 SPAG11BQ08648 103 aa6.15□□□□□ -1.43
RFX3-201ENST00000302303 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.43
RFX3-201ENST00000302303 CDPF1Q6NVV7 123 aa6.15□□□□□ -1.43
RFX3-201ENST00000302303 C2orf82Q6UX34 121 aa6.15□□□□□ -1.43
RFX3-201ENST00000302303 Q8IZM0 81 aa6.15□□□□□ -1.43
RFX3-201ENST00000302303 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms