RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 H3BT86 120 aa9.64□□□□□ -0.87
CTTN-201ENST00000301843 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
CTTN-201ENST00000301843 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
CTTN-201ENST00000301843 EDA2RQ9HAV5 297 aa9.64□□□□□ -0.87
CTTN-201ENST00000301843 HERVK_113P63121 156 aa9.63□□□□□ -0.87
CTTN-201ENST00000301843 BEAN1Q3B7T3 259 aa9.63□□□□□ -0.87
CTTN-201ENST00000301843 TIRAPP58753 221 aa9.63□□□□□ -0.87
CTTN-201ENST00000301843 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
CTTN-201ENST00000301843 TRGV2A0A075B6R0 118 aa9.62□□□□□ -0.87
CTTN-201ENST00000301843 M0QXV9 152 aa9.62□□□□□ -0.87
CTTN-201ENST00000301843 DAZ2Q13117 558 aaKnown RBP9.62□□□□□ -0.87
CTTN-201ENST00000301843 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
CTTN-201ENST00000301843 SMCR5Q8TEV8 140 aa9.62□□□□□ -0.87
CTTN-201ENST00000301843 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
CTTN-201ENST00000301843 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
CTTN-201ENST00000301843 K7EQD1 137 aa9.62□□□□□ -0.87
CTTN-201ENST00000301843 HIST2H2BCQ6DN03 193 aa9.62□□□□□ -0.87
CTTN-201ENST00000301843 UBE2L6O14933 153 aa9.62□□□□□ -0.87
CTTN-201ENST00000301843 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
CTTN-201ENST00000301843 PFN2P35080 140 aa9.61□□□□□ -0.87
CTTN-201ENST00000301843 C4orf3Q8WVX3 66 aa9.61□□□□□ -0.87
CTTN-201ENST00000301843 DNAJC30Q96LL9 226 aa9.61□□□□□ -0.87
CTTN-201ENST00000301843 CDC42SE2Q9NRR3 84 aa9.61□□□□□ -0.87
CTTN-201ENST00000301843 COX7A2LO14548 114 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 BAALC-AS2P0C853 105 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 F5H768 121 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 ATP5G1P05496 136 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 LRRC75A-AS1Q8N1F1 130 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 C9orf129Q5T035 196 aaKnown RBP9.6□□□□□ -0.87
CTTN-201ENST00000301843 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
CTTN-201ENST00000301843 IGLV4-60A0A075B6I1 120 aa9.59□□□□□ -0.87
CTTN-201ENST00000301843 TENM4Q6N022 2769 aa9.59□□□□□ -0.87
CTTN-201ENST00000301843 FAM236AA0A1B0GUQ0 79 aa9.59□□□□□ -0.87
CTTN-201ENST00000301843 FAM236BA0A1B0GV22 79 aa9.59□□□□□ -0.87
CTTN-201ENST00000301843 A0A096LPF7 62 aa9.58□□□□□ -0.88
CTTN-201ENST00000301843 TIMM17BO60830 172 aa9.58□□□□□ -0.88
CTTN-201ENST00000301843 LINC00158P58513 81 aa9.58□□□□□ -0.88
CTTN-201ENST00000301843 GAGE2AQ6NT46 116 aa9.58□□□□□ -0.88
CTTN-201ENST00000301843 LINC00337Q8N6G1 96 aa9.58□□□□□ -0.88
CTTN-201ENST00000301843 CCL24O00175 119 aa9.57□□□□□ -0.88
CTTN-201ENST00000301843 SMIM20Q8N5G0 67 aa9.57□□□□□ -0.88
CTTN-201ENST00000301843 SLPIP03973 132 aa9.57□□□□□ -0.88
CTTN-201ENST00000301843 KRTAP1-3Q8IUG1 177 aa9.57□□□□□ -0.88
CTTN-201ENST00000301843 TMEM243Q9BU79 118 aa9.57□□□□□ -0.88
CTTN-201ENST00000301843 C22orf24Q9Y442 160 aa9.57□□□□□ -0.88
CTTN-201ENST00000301843 SHISA2Q6UWI4 295 aa9.56□□□□□ -0.88
CTTN-201ENST00000301843 A0A087WYN8 130 aa9.56□□□□□ -0.88
CTTN-201ENST00000301843 TRGV4A0A0C4DH28 118 aa9.56□□□□□ -0.88
CTTN-201ENST00000301843 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
CTTN-201ENST00000301843 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
CTTN-201ENST00000301843 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
CTTN-201ENST00000301843 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
CTTN-201ENST00000301843 OR13C6PQ8NH95 151 aa9.55□□□□□ -0.88
CTTN-201ENST00000301843 SND1-IT1Q9HBX3 110 aa9.55□□□□□ -0.88
CTTN-201ENST00000301843 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
CTTN-201ENST00000301843 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
CTTN-201ENST00000301843 WFDC11Q8NEX6 87 aa9.55□□□□□ -0.88
CTTN-201ENST00000301843 DNAJC9-AS1A6NH13 148 aa9.54□□□□□ -0.88
CTTN-201ENST00000301843 CRPP02741 224 aa9.54□□□□□ -0.88
CTTN-201ENST00000301843 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
CTTN-201ENST00000301843 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
CTTN-201ENST00000301843 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
CTTN-201ENST00000301843 LINC01600Q96MT4 127 aa9.53□□□□□ -0.88
CTTN-201ENST00000301843 C14orf132Q9NPU4 83 aa9.53□□□□□ -0.88
CTTN-201ENST00000301843 IL17DQ8TAD2 202 aa9.52□□□□□ -0.89
CTTN-201ENST00000301843 SMIM11BQ8TCY0 68 aa9.52□□□□□ -0.89
CTTN-201ENST00000301843 PLAC8L1A1L4L8 177 aa9.52□□□□□ -0.89
CTTN-201ENST00000301843 XCL1P47992 114 aa9.52□□□□□ -0.89
CTTN-201ENST00000301843 PAX4O43316 350 aa9.51□□□□□ -0.89
CTTN-201ENST00000301843 Q6Q795 121 aa9.51□□□□□ -0.89
CTTN-201ENST00000301843 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
CTTN-201ENST00000301843 CCL18P55774 89 aa9.51□□□□□ -0.89
CTTN-201ENST00000301843 DEFB121Q5J5C9 76 aa9.51□□□□□ -0.89
CTTN-201ENST00000301843 TENM1Q9UKZ4 2725 aa9.5□□□□□ -0.89
CTTN-201ENST00000301843 TRBV10-1A0A0K0K1A3 114 aa9.5□□□□□ -0.89
CTTN-201ENST00000301843 IGKV3D-7A0A0C4DH55 119 aa9.5□□□□□ -0.89
CTTN-201ENST00000301843 LECT2O14960 151 aa9.5□□□□□ -0.89
CTTN-201ENST00000301843 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
CTTN-201ENST00000301843 FAM240AA0A1B0GVK7 77 aa9.49□□□□□ -0.89
CTTN-201ENST00000301843 NCR3O14931 201 aa9.49□□□□□ -0.89
CTTN-201ENST00000301843 DEFB4AO15263 64 aa9.49□□□□□ -0.89
CTTN-201ENST00000301843 MALP21145 153 aa9.49□□□□□ -0.89
CTTN-201ENST00000301843 Q8N3U1 123 aa9.49□□□□□ -0.89
CTTN-201ENST00000301843 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
CTTN-201ENST00000301843 HELZ2Q9BYK8 2649 aaKnown RBP9.49□□□□□ -0.89
CTTN-201ENST00000301843 DNAL4O96015 105 aa9.48□□□□□ -0.89
CTTN-201ENST00000301843 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
CTTN-201ENST00000301843 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
CTTN-201ENST00000301843 IGLV10-54A0A075B6I4 117 aa9.47□□□□□ -0.89
CTTN-201ENST00000301843 TRACP01848 142 aa9.47□□□□□ -0.89
CTTN-201ENST00000301843 HERV-K104P63124 156 aa9.47□□□□□ -0.89
CTTN-201ENST00000301843 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
CTTN-201ENST00000301843 HECTD1Q9ULT8 2610 aa9.47□□□□□ -0.89
CTTN-201ENST00000301843 RNASE1P07998 156 aaKnown RBP9.47□□□□□ -0.89
CTTN-201ENST00000301843 TRBV7-7A0A0K0K1E9 115 aa9.46□□□□□ -0.89
CTTN-201ENST00000301843 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.89
CTTN-201ENST00000301843 C6orf226Q5I0X4 101 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms