RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
HIF3A-204ENST00000300862 MIAQ16674 131 aa9.2□□□□□ -0.94
HIF3A-204ENST00000300862 LINC00242Q5T6M2 205 aa9.2□□□□□ -0.94
HIF3A-204ENST00000300862 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
HIF3A-204ENST00000300862 NOTCH2Q04721 2471 aa9.2□□□□□ -0.94
HIF3A-204ENST00000300862 LOC100131303A0A0U1RQF7 123 aa9.2□□□□□ -0.94
HIF3A-204ENST00000300862 C2orf82Q6UX34 121 aa9.2□□□□□ -0.94
HIF3A-204ENST00000300862 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
HIF3A-204ENST00000300862 GAGE7O76087 117 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 GAGE12FP0CL80 117 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 GAGE12GP0CL81 117 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 GAGE12IP0CL82 117 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 TTC32Q5I0X7 151 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 PPDPFQ9H3Y8 114 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 KRTAP1-1Q07627 177 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 CLEC2BQ92478 149 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 SPANXDQ9BXN6 97 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
HIF3A-204ENST00000300862 ANK3Q12955 4377 aaKnown RBP9.18□□□□□ -0.94
HIF3A-204ENST00000300862 FASNP49327 2511 aaKnown RBP9.18□□□□□ -0.94
HIF3A-204ENST00000300862 TIRAPP58753 221 aa9.18□□□□□ -0.94
HIF3A-204ENST00000300862 Q9H8V8 135 aa9.18□□□□□ -0.94
HIF3A-204ENST00000300862 GCN1Q92616 2671 aaKnown RBP9.18□□□□□ -0.94
HIF3A-204ENST00000300862 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
HIF3A-204ENST00000300862 IGLV5-45A0A087WSX0 123 aa9.17□□□□□ -0.94
HIF3A-204ENST00000300862 HIVEP2P31629 2446 aa9.17□□□□□ -0.94
HIF3A-204ENST00000300862 UNC79Q9P2D8 2635 aa9.17□□□□□ -0.94
HIF3A-204ENST00000300862 PLAC8L1A1L4L8 177 aa9.17□□□□□ -0.94
HIF3A-204ENST00000300862 H3BT86 120 aa9.17□□□□□ -0.94
HIF3A-204ENST00000300862 NDUFA1O15239 70 aa9.16□□□□□ -0.94
HIF3A-204ENST00000300862 TRBV10-1A0A0K0K1A3 114 aa9.16□□□□□ -0.94
HIF3A-204ENST00000300862 SMIM9A6NGZ8 99 aa9.16□□□□□ -0.94
HIF3A-204ENST00000300862 HERVK_113P63121 156 aa9.16□□□□□ -0.94
HIF3A-204ENST00000300862 DAZ2Q13117 558 aaKnown RBP9.16□□□□□ -0.94
HIF3A-204ENST00000300862 DAZ4Q86SG3 579 aaKnown RBP9.16□□□□□ -0.94
HIF3A-204ENST00000300862 DAZ3Q9NR90 486 aaKnown RBP9.16□□□□□ -0.94
HIF3A-204ENST00000300862 IGKV3OR2-268A0A0C4DH90 116 aa9.15□□□□□ -0.94
HIF3A-204ENST00000300862 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
HIF3A-204ENST00000300862 LST1O00453 97 aa9.15□□□□□ -0.94
HIF3A-204ENST00000300862 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.94
HIF3A-204ENST00000300862 C19orf73Q9NVV2 129 aa9.15□□□□□ -0.94
HIF3A-204ENST00000300862 IGLV5-39A0A0G2JS06 123 aa9.14□□□□□ -0.95
HIF3A-204ENST00000300862 VWFP04275 2813 aa9.14□□□□□ -0.95
HIF3A-204ENST00000300862 IGLV1-51P01701 117 aa9.14□□□□□ -0.95
HIF3A-204ENST00000300862 DEFB121Q5J5C9 76 aa9.14□□□□□ -0.95
HIF3A-204ENST00000300862 SMR3AQ99954 134 aa9.14□□□□□ -0.95
HIF3A-204ENST00000300862 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
HIF3A-204ENST00000300862 UBE2L6O14933 153 aa9.13□□□□□ -0.95
HIF3A-204ENST00000300862 RNASE1P07998 156 aaKnown RBP9.13□□□□□ -0.95
HIF3A-204ENST00000300862 COX6CP09669 75 aa9.13□□□□□ -0.95
HIF3A-204ENST00000300862 PRIMA1Q86XR5 153 aa9.13□□□□□ -0.95
HIF3A-204ENST00000300862 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
HIF3A-204ENST00000300862 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
HIF3A-204ENST00000300862 TRGV4A0A0C4DH28 118 aa9.12□□□□□ -0.95
HIF3A-204ENST00000300862 TIMM17BO60830 172 aa9.12□□□□□ -0.95
HIF3A-204ENST00000300862 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
HIF3A-204ENST00000300862 MRPL23Q16540 153 aaKnown RBP9.12□□□□□ -0.95
HIF3A-204ENST00000300862 SOSTDC1Q6X4U4 206 aa9.12□□□□□ -0.95
HIF3A-204ENST00000300862 CSNK1G2-AS1Q8NCQ2 148 aa9.12□□□□□ -0.95
HIF3A-204ENST00000300862 C16orf74Q96GX8 76 aa9.12□□□□□ -0.95
HIF3A-204ENST00000300862 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
HIF3A-204ENST00000300862 HECTD1Q9ULT8 2610 aa9.11□□□□□ -0.95
HIF3A-204ENST00000300862 F5H768 121 aa9.11□□□□□ -0.95
HIF3A-204ENST00000300862 C16orf95Q9H693 158 aa9.11□□□□□ -0.95
HIF3A-204ENST00000300862 TRBV7-7A0A0K0K1E9 115 aa9.1□□□□□ -0.95
HIF3A-204ENST00000300862 DEFB130BP0DP73 79 aa9.1□□□□□ -0.95
HIF3A-204ENST00000300862 DEFB130AP0DP74 79 aa9.1□□□□□ -0.95
HIF3A-204ENST00000300862 IGLV4-60A0A075B6I1 120 aa9.09□□□□□ -0.95
HIF3A-204ENST00000300862 CHCHD5Q9BSY4 110 aa9.09□□□□□ -0.95
HIF3A-204ENST00000300862 FAM19A3Q7Z5A8 133 aa9.08□□□□□ -0.96
HIF3A-204ENST00000300862 MRAPQ8TCY5 172 aa9.08□□□□□ -0.96
HIF3A-204ENST00000300862 TOMM7Q9P0U1 55 aa9.08□□□□□ -0.96
HIF3A-204ENST00000300862 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
HIF3A-204ENST00000300862 CMC4P56277 68 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-204ENST00000300862 KRTAP10-3P60369 221 aa9.08□□□□□ -0.96
HIF3A-204ENST00000300862 FHL2Q14192 279 aa9.08□□□□□ -0.96
HIF3A-204ENST00000300862 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
HIF3A-204ENST00000300862 HILS1P60008 231 aa9.06□□□□□ -0.96
HIF3A-204ENST00000300862 C3orf56Q8N813 242 aa9.06□□□□□ -0.96
HIF3A-204ENST00000300862 SMCR5Q8TEV8 140 aa9.06□□□□□ -0.96
HIF3A-204ENST00000300862 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
HIF3A-204ENST00000300862 SPATA3Q8NHX4 192 aa9.05□□□□□ -0.96
HIF3A-204ENST00000300862 OTOGQ6ZRI0 2925 aa9.04□□□□□ -0.96
HIF3A-204ENST00000300862 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
HIF3A-204ENST00000300862 FAM236AA0A1B0GUQ0 79 aa9.04□□□□□ -0.96
HIF3A-204ENST00000300862 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
HIF3A-204ENST00000300862 PF4P02776 101 aa9.04□□□□□ -0.96
HIF3A-204ENST00000300862 SEC61GP60059 68 aa9.04□□□□□ -0.96
HIF3A-204ENST00000300862 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
HIF3A-204ENST00000300862 TENM1Q9UKZ4 2725 aa9.03□□□□□ -0.96
HIF3A-204ENST00000300862 A0A096LPF7 62 aa9.03□□□□□ -0.96
HIF3A-204ENST00000300862 COX7A2LO14548 114 aa9.03□□□□□ -0.96
HIF3A-204ENST00000300862 COX7B2Q8TF08 81 aa9.03□□□□□ -0.96
HIF3A-204ENST00000300862 MIR7-3HGQ8N6C7 128 aa9.02□□□□□ -0.97
HIF3A-204ENST00000300862 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
HIF3A-204ENST00000300862 CLPSL2Q6UWE3 100 aa9.01□□□□□ -0.97
HIF3A-204ENST00000300862 LINC00482Q8N8I6 264 aa9.01□□□□□ -0.97
HIF3A-204ENST00000300862 C22orf24Q9Y442 160 aa9.01□□□□□ -0.97
HIF3A-204ENST00000300862 DEFB4AO15263 64 aa9.01□□□□□ -0.97
HIF3A-204ENST00000300862 GYPEP15421 78 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms