RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
TVP23A-201ENST00000299866 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 WFDC9Q8NEX5 89 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 OXTP01178 125 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 MSMBP08118 114 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 TMEM258P61165 79 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 UBE2L6O14933 153 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 COX7B2Q8TF08 81 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 OVOL2Q9BRP0 275 aa9.26□□□□□ -0.93
TVP23A-201ENST00000299866 CUBNO60494 3623 aa9.25□□□□□ -0.93
TVP23A-201ENST00000299866 PAX4O43316 350 aa9.25□□□□□ -0.93
TVP23A-201ENST00000299866 HILS1P60008 231 aa9.25□□□□□ -0.93
TVP23A-201ENST00000299866 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
TVP23A-201ENST00000299866 CCL18P55774 89 aa9.25□□□□□ -0.93
TVP23A-201ENST00000299866 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
TVP23A-201ENST00000299866 INSP01308 110 aa9.24□□□□□ -0.93
TVP23A-201ENST00000299866 C10orf105Q8TEF2 133 aa9.24□□□□□ -0.93
TVP23A-201ENST00000299866 C11orf68Q9H3H3 251 aaKnown RBP9.24□□□□□ -0.93
TVP23A-201ENST00000299866 H0YGX0 51 aa9.23□□□□□ -0.93
TVP23A-201ENST00000299866 FAM19A3Q7Z5A8 133 aa9.23□□□□□ -0.93
TVP23A-201ENST00000299866 MAP6D1Q9H9H5 199 aa9.23□□□□□ -0.93
TVP23A-201ENST00000299866 KHDC1LQ5JSQ8 128 aa9.23□□□□□ -0.93
TVP23A-201ENST00000299866 K7EQD1 137 aa9.22□□□□□ -0.93
TVP23A-201ENST00000299866 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
TVP23A-201ENST00000299866 Q6ZTI0 123 aa9.22□□□□□ -0.93
TVP23A-201ENST00000299866 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
TVP23A-201ENST00000299866 CCL19Q99731 98 aa9.22□□□□□ -0.93
TVP23A-201ENST00000299866 CSMD2Q7Z408 3487 aa9.21□□□□□ -0.93
TVP23A-201ENST00000299866 TMEM243Q9BU79 118 aa9.21□□□□□ -0.94
TVP23A-201ENST00000299866 DYNLRB2Q8TF09 96 aa9.21□□□□□ -0.94
TVP23A-201ENST00000299866 GHRHP01286 108 aa9.2□□□□□ -0.94
TVP23A-201ENST00000299866 FHL2Q14192 279 aa9.2□□□□□ -0.94
TVP23A-201ENST00000299866 OBSCN-AS1Q96MR7 158 aa9.2□□□□□ -0.94
TVP23A-201ENST00000299866 USP9YO00507 2555 aaPredicted RBP9.2□□□□□ -0.94
TVP23A-201ENST00000299866 WNK1Q9H4A3 2382 aa9.2□□□□□ -0.94
TVP23A-201ENST00000299866 A8MTW9 85 aa9.2□□□□□ -0.94
TVP23A-201ENST00000299866 RNASE1P07998 156 aaKnown RBP9.2□□□□□ -0.94
TVP23A-201ENST00000299866 LOC100131303A0A0U1RQF7 123 aa9.2□□□□□ -0.94
TVP23A-201ENST00000299866 ORMDL1Q9P0S3 153 aa9.2□□□□□ -0.94
TVP23A-201ENST00000299866 FAM19A1Q7Z5A9 133 aa9.19□□□□□ -0.94
TVP23A-201ENST00000299866 CELSR2Q9HCU4 2923 aa9.19□□□□□ -0.94
TVP23A-201ENST00000299866 UCNP55089 124 aa9.18□□□□□ -0.94
TVP23A-201ENST00000299866 ENHOQ6UWT2 76 aa9.18□□□□□ -0.94
TVP23A-201ENST00000299866 MAPK1IP1LQ8NDC0 245 aa9.18□□□□□ -0.94
TVP23A-201ENST00000299866 NCOR2Q9Y618 2525 aa9.18□□□□□ -0.94
TVP23A-201ENST00000299866 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
TVP23A-201ENST00000299866 CCKP06307 115 aa9.17□□□□□ -0.94
TVP23A-201ENST00000299866 C1orf158Q8N1D5 194 aa9.17□□□□□ -0.94
TVP23A-201ENST00000299866 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
TVP23A-201ENST00000299866 NOP10Q9NPE3 64 aaKnown RBP9.17□□□□□ -0.94
TVP23A-201ENST00000299866 B4DSR2 109 aa9.16□□□□□ -0.94
TVP23A-201ENST00000299866 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
TVP23A-201ENST00000299866 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
TVP23A-201ENST00000299866 SS18Q15532 418 aa9.16□□□□□ -0.94
TVP23A-201ENST00000299866 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
TVP23A-201ENST00000299866 STHQ8IWL8 128 aa9.15□□□□□ -0.94
TVP23A-201ENST00000299866 Q5XG85 94 aa9.15□□□□□ -0.94
TVP23A-201ENST00000299866 TRAV25A0A0B4J276 109 aa9.15□□□□□ -0.95
TVP23A-201ENST00000299866 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.95
TVP23A-201ENST00000299866 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
TVP23A-201ENST00000299866 ZNF702PQ9H963 129 aa9.14□□□□□ -0.95
TVP23A-201ENST00000299866 TRGV2A0A075B6R0 118 aa9.14□□□□□ -0.95
TVP23A-201ENST00000299866 TRBV6-4A0A1B0GX49 114 aa9.13□□□□□ -0.95
TVP23A-201ENST00000299866 USP9XQ93008 2570 aaPredicted RBP9.13□□□□□ -0.95
TVP23A-201ENST00000299866 GNLYP22749 145 aa9.13□□□□□ -0.95
TVP23A-201ENST00000299866 NBL1P41271 181 aa9.13□□□□□ -0.95
TVP23A-201ENST00000299866 ZANQ9Y493 2812 aa9.13□□□□□ -0.95
TVP23A-201ENST00000299866 CHD8Q9HCK8 2581 aa9.13□□□□□ -0.95
TVP23A-201ENST00000299866 DEFB114Q30KQ6 69 aa9.13□□□□□ -0.95
TVP23A-201ENST00000299866 IGHV3OR16-9A0A0B4J2B5 98 aa9.12□□□□□ -0.95
TVP23A-201ENST00000299866 JMJD1CQ15652 2540 aa9.12□□□□□ -0.95
TVP23A-201ENST00000299866 ODF3L2Q3SX64 289 aa9.12□□□□□ -0.95
TVP23A-201ENST00000299866 S100A7L2Q5SY68 101 aa9.12□□□□□ -0.95
TVP23A-201ENST00000299866 WIPF1O43516 503 aa9.11□□□□□ -0.95
TVP23A-201ENST00000299866 PLA2G2AP14555 144 aa9.11□□□□□ -0.95
TVP23A-201ENST00000299866 TRGV4A0A0C4DH28 118 aa9.1□□□□□ -0.95
TVP23A-201ENST00000299866 JMJD7-PLA2G4BH0Y9G9 81 aa9.1□□□□□ -0.95
TVP23A-201ENST00000299866 NDUFC2O95298 119 aa9.1□□□□□ -0.95
TVP23A-201ENST00000299866 XCL1P47992 114 aa9.1□□□□□ -0.95
TVP23A-201ENST00000299866 IL17DQ8TAD2 202 aa9.1□□□□□ -0.95
TVP23A-201ENST00000299866 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
TVP23A-201ENST00000299866 POLQO75417 2590 aa9.09□□□□□ -0.95
TVP23A-201ENST00000299866 TLN2Q9Y4G6 2542 aa9.09□□□□□ -0.95
TVP23A-201ENST00000299866 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
TVP23A-201ENST00000299866 Q8N814 137 aa9.09□□□□□ -0.95
TVP23A-201ENST00000299866 A0A087WZ39 114 aa9.09□□□□□ -0.95
TVP23A-201ENST00000299866 C11orf44Q8N8P7 122 aa9.09□□□□□ -0.95
TVP23A-201ENST00000299866 CLPSL2Q6UWE3 100 aa9.09□□□□□ -0.95
TVP23A-201ENST00000299866 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
TVP23A-201ENST00000299866 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
TVP23A-201ENST00000299866 TMEM256-PLSCR3K7ERE1 68 aa9.07□□□□□ -0.96
TVP23A-201ENST00000299866 CHD6Q8TD26 2715 aa9.07□□□□□ -0.96
TVP23A-201ENST00000299866 LY6G6DO95868 133 aa9.07□□□□□ -0.96
TVP23A-201ENST00000299866 A0A096LNT2 108 aa9.07□□□□□ -0.96
TVP23A-201ENST00000299866 ATP5EP2Q5VTU8 51 aa9.07□□□□□ -0.96
TVP23A-201ENST00000299866 TRBV6-8A0A0A6YYG3 113 aa9.06□□□□□ -0.96
TVP23A-201ENST00000299866 A0A1W2PRX2 142 aa9.06□□□□□ -0.96
TVP23A-201ENST00000299866 NANOS2P60321 138 aaKnown RBP9.06□□□□□ -0.96
TVP23A-201ENST00000299866 LINC01356Q8N9X3 169 aa9.06□□□□□ -0.96
TVP23A-201ENST00000299866 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms