RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 DGAT2L7PQ6IED9 249 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 Q6ZRN7 208 aaPredicted RBP4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 MAPKAPK5-AS1Q8N8E1 139 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 BAALCQ8WXS3 180 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 TMEM18Q96B42 140 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 CDC42SE2Q9NRR3 84 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 A0A0J9YXV3 536 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 GAGE12HA6NDE8 117 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 PRSS29PA6NIE9 313 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 IBA57-AS1B1ANH7 110 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 B5MCH6 92 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 CCL25O15444 150 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 G0S2P27469 103 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 XCL1P47992 114 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 TTC32Q5I0X7 151 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 KRTAP26-1Q6PEX3 210 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 C6orf223Q8N319 242 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 ZNF664Q8N3J9 261 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 CHCHD10Q8WYQ3 142 aaPredicted RBP4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 TMEM101Q96IK0 257 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 HIST1H2BLQ99880 126 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
DEPDC4-201ENST00000299185 LINC00959A0A1B0GUT2 108 aa4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 ZNF25P17030 456 aaPredicted RBP4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 COX6A2Q02221 97 aa4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 LINC00526Q96FQ7 95 aa4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 TMEM141Q96I45 108 aa4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 TIMM17AQ99595 171 aa4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 LYSTQ99698 3801 aa4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 PRR34Q9NV39 138 aa4.3□□□□□ -1.72
DEPDC4-201ENST00000299185 IGLV4-69A0A075B6H9 119 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 LINC01549A6NIU2 74 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 H7C423 109 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 LEPROTL1O95214 131 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 UBE2D1P51668 147 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 PKIAP61925 76 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 MRPS36P82909 103 aaKnown RBP4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 FOXI1Q12951 378 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 HIGD2BQ4VC39 106 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 TEX43Q6ZNM6 134 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 C5orf38Q86SI9 138 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 C10orf126Q8N4M7 172 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 OR10D4PQ8NGN7 298 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 AMELXQ99217 191 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 C1orf43Q9BWL3 253 aa4.29□□□□□ -1.72
DEPDC4-201ENST00000299185 DNAH10Q8IVF4 4471 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 IGHV3-64A0A075B6Q5 118 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 C11orf86A6NJI1 115 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 AKR1D1P51857 326 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 KRTDAPP60985 99 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 Q6ZN92 141 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 ERASQ7Z444 233 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 CHAC1Q9BUX1 264 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 CST9LQ9H4G1 147 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 HSPB8Q9UJY1 196 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 PYGO1Q9Y3Y4 419 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
DEPDC4-201ENST00000299185 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 USP17L23D6RBM5 183 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 PSCAO43653 123 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 ATP5LO75964 103 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 SPINK8P0C7L1 97 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 C3orf79P0CE67 100 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 ZNF22P17026 224 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 PTTG1IPP53801 180 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 ODF1Q14990 250 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 PMVKQ15126 192 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 MIAQ16674 131 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 ATOH7Q8N100 152 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 C15orf56Q8N910 161 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 C2orf88Q9BSF0 95 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 VCX2Q9H322 139 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 MRPL35Q9NZE8 188 aaKnown RBP4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 DNAH17Q9UFH2 4485 aa4.27□□□□□ -1.73
DEPDC4-201ENST00000299185 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 DNAH2Q9P225 4427 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 TRAV9-2A0A087WT02 112 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 A0A087WTM6 91 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 TRAV8-3A0A0A6YYJ7 113 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 LRCOL1A6NCL2 159 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 PRSS1P07477 247 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 IGLC3P0DOY3 106 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 JOSD1Q15040 202 aaPredicted RBP4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 SS18Q15532 418 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 LINC01620Q4KN68 170 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 LINC00469Q8N7U9 141 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 MAP1LC3CQ9BXW4 147 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 CHTOPQ9Y3Y2 248 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-201ENST00000299185 SYS1-DBNDD2H3BUS1 97 aa4.25□□□□□ -1.73
DEPDC4-201ENST00000299185 NPSP0C0P6 89 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms