RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 DAZ4Q86SG3 579 aaKnown RBP6.62□□□□□ -1.35
PRDM9-201ENST00000296682 C3orf56Q8N813 242 aa6.62□□□□□ -1.35
PRDM9-201ENST00000296682 DAZ3Q9NR90 486 aaKnown RBP6.62□□□□□ -1.35
PRDM9-201ENST00000296682 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 SMAGPQ0VAQ4 97 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 BEAN1Q3B7T3 259 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 ATP6V0E2Q8NHE4 81 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 CRYBA4P53673 196 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 LINC00242Q5T6M2 205 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 C16orf95Q9H693 158 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 FBN1P35555 2871 aaKnown RBP6.61□□□□□ -1.35
PRDM9-201ENST00000296682 TCL1BO95988 128 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
PRDM9-201ENST00000296682 LYRM7Q5U5X0 104 aa6.61□□□□□ -1.35
PRDM9-201ENST00000296682 HERVK_113P63121 156 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
PRDM9-201ENST00000296682 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 C9orf66Q5T8R8 295 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 LINC00526Q96FQ7 95 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 PYGO1Q9Y3Y4 419 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 TINCRA0A1B0GVN0 87 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
PRDM9-201ENST00000296682 COX6CP09669 75 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 RPL13AP40429 203 aaKnown RBP6.6□□□□□ -1.35
PRDM9-201ENST00000296682 UBE2D1P51668 147 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 UBE2D3P61077 147 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 UBE2D2P62837 147 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 MRAPQ8TCY5 172 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 CLEC2BQ92478 149 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 AMELXQ99217 191 aa6.6□□□□□ -1.35
PRDM9-201ENST00000296682 KMT2BQ9UMN6 2715 aaPredicted RBP6.59□□□□□ -1.35
PRDM9-201ENST00000296682 TRBV10-1A0A0K0K1A3 114 aa6.59□□□□□ -1.35
PRDM9-201ENST00000296682 Q8N3U1 123 aa6.59□□□□□ -1.35
PRDM9-201ENST00000296682 CITED1Q99966 193 aa6.59□□□□□ -1.35
PRDM9-201ENST00000296682 RETNQ9HD89 108 aa6.59□□□□□ -1.35
PRDM9-201ENST00000296682 FAM19A3Q7Z5A8 133 aa6.58□□□□□ -1.36
PRDM9-201ENST00000296682 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
PRDM9-201ENST00000296682 FHL2Q14192 279 aa6.58□□□□□ -1.36
PRDM9-201ENST00000296682 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
PRDM9-201ENST00000296682 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.58□□□□□ -1.36
PRDM9-201ENST00000296682 DEFB121Q5J5C9 76 aa6.58□□□□□ -1.36
PRDM9-201ENST00000296682 CDC42SE2Q9NRR3 84 aa6.58□□□□□ -1.36
PRDM9-201ENST00000296682 TRBV6-8A0A0A6YYG3 113 aa6.57□□□□□ -1.36
PRDM9-201ENST00000296682 F8W1H4 67 aa6.57□□□□□ -1.36
PRDM9-201ENST00000296682 MALP21145 153 aa6.57□□□□□ -1.36
PRDM9-201ENST00000296682 IGHV4-28A0A0C4DH34 117 aa6.57□□□□□ -1.36
PRDM9-201ENST00000296682 BAHCC1Q9P281 2608 aa6.57□□□□□ -1.36
PRDM9-201ENST00000296682 LINC00269Q8N2A0 174 aa6.57□□□□□ -1.36
PRDM9-201ENST00000296682 TRRAPQ9Y4A5 3859 aa6.57□□□□□ -1.36
PRDM9-201ENST00000296682 SPANXB1Q9NS25 103 aaPredicted RBP6.56□□□□□ -1.36
PRDM9-201ENST00000296682 IGHV3-33P01772 117 aa6.56□□□□□ -1.36
PRDM9-201ENST00000296682 C2orf82Q6UX34 121 aa6.56□□□□□ -1.36
PRDM9-201ENST00000296682 PRO0255Q9UI72 69 aa6.56□□□□□ -1.36
PRDM9-201ENST00000296682 APOC4P55056 127 aa6.56□□□□□ -1.36
PRDM9-201ENST00000296682 TRBV6-4A0A1B0GX49 114 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 PLAC8L1A1L4L8 177 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 SLC25A20O43772 301 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 CKS1BP61024 79 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 IGHV4-30-4P0DP06 118 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
PRDM9-201ENST00000296682 G3V4G9 280 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 SS18Q15532 418 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 CSNK1G2-AS1Q8NCQ2 148 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 PPDPFQ9H3Y8 114 aa6.55□□□□□ -1.36
PRDM9-201ENST00000296682 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
PRDM9-201ENST00000296682 TRIAP1O43715 76 aa6.54□□□□□ -1.36
PRDM9-201ENST00000296682 KLK12Q9UKR0 248 aa6.54□□□□□ -1.36
PRDM9-201ENST00000296682 CELA1Q9UNI1 258 aa6.54□□□□□ -1.36
PRDM9-201ENST00000296682 MIAQ16674 131 aa6.54□□□□□ -1.36
PRDM9-201ENST00000296682 ZFAND6Q6FIF0 208 aa6.54□□□□□ -1.36
PRDM9-201ENST00000296682 COX7B2Q8TF08 81 aa6.54□□□□□ -1.36
PRDM9-201ENST00000296682 ATP5G1P05496 136 aa6.53□□□□□ -1.36
PRDM9-201ENST00000296682 SIGMAR1Q99720 223 aa6.53□□□□□ -1.36
PRDM9-201ENST00000296682 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
PRDM9-201ENST00000296682 ANKRD29Q8N6D5 301 aa6.53□□□□□ -1.36
PRDM9-201ENST00000296682 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
PRDM9-201ENST00000296682 UBE2WQ96B02 151 aa6.53□□□□□ -1.36
PRDM9-201ENST00000296682 X6R8D5 127 aa6.53□□□□□ -1.36
PRDM9-201ENST00000296682 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
PRDM9-201ENST00000296682 SPART-AS1P0CW21 52 aa6.52□□□□□ -1.37
PRDM9-201ENST00000296682 SCGB1A1P11684 91 aa6.52□□□□□ -1.37
PRDM9-201ENST00000296682 TIRAPP58753 221 aa6.52□□□□□ -1.37
PRDM9-201ENST00000296682 ATXN8Q156A1 80 aa6.52□□□□□ -1.37
PRDM9-201ENST00000296682 RNF183Q96D59 192 aa6.52□□□□□ -1.37
PRDM9-201ENST00000296682 TRBV20-1A0A075B6N2 111 aa6.52□□□□□ -1.37
PRDM9-201ENST00000296682 PRR3P79522 188 aaKnown RBP6.51□□□□□ -1.37
PRDM9-201ENST00000296682 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 IGLV5-45A0A087WSX0 123 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 CRPP02741 224 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
PRDM9-201ENST00000296682 Q9HAA7 133 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 PKD1L1Q8TDX9 2849 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 M0QXV9 152 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 LINC01620Q4KN68 170 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 OVOL2Q9BRP0 275 aa6.51□□□□□ -1.37
PRDM9-201ENST00000296682 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
PRDM9-201ENST00000296682 NDUFA1O15239 70 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms