RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 TRAV13-2A0A0B4J235 113 aa7.24□□□□□ -1.25
CCDC36-201ENST00000296449 ODF3L2Q3SX64 289 aa7.24□□□□□ -1.25
CCDC36-201ENST00000296449 C3orf56Q8N813 242 aa7.24□□□□□ -1.25
CCDC36-201ENST00000296449 C4orf3Q8WVX3 66 aa7.24□□□□□ -1.25
CCDC36-201ENST00000296449 KHDC1LQ5JSQ8 128 aa7.24□□□□□ -1.25
CCDC36-201ENST00000296449 Q6ZTI0 123 aa7.24□□□□□ -1.25
CCDC36-201ENST00000296449 MYO9AB2RTY4 2548 aa7.24□□□□□ -1.25
CCDC36-201ENST00000296449 C5orf38Q86SI9 138 aa7.23□□□□□ -1.25
CCDC36-201ENST00000296449 OVOL2Q9BRP0 275 aa7.23□□□□□ -1.25
CCDC36-201ENST00000296449 POLQO75417 2590 aa7.23□□□□□ -1.25
CCDC36-201ENST00000296449 C2CD3Q4AC94 2353 aa7.23□□□□□ -1.25
CCDC36-201ENST00000296449 Q9HAA7 133 aa7.23□□□□□ -1.25
CCDC36-201ENST00000296449 ANKRD17O75179 2603 aaKnown RBP7.22□□□□□ -1.25
CCDC36-201ENST00000296449 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
CCDC36-201ENST00000296449 UQCRQO14949 82 aa7.22□□□□□ -1.25
CCDC36-201ENST00000296449 STHQ8IWL8 128 aa7.22□□□□□ -1.25
CCDC36-201ENST00000296449 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
CCDC36-201ENST00000296449 IGKV2-28A0A075B6P5 120 aa7.21□□□□□ -1.25
CCDC36-201ENST00000296449 IGKV2D-28P01615 120 aa7.21□□□□□ -1.25
CCDC36-201ENST00000296449 CRPP02741 224 aa7.21□□□□□ -1.25
CCDC36-201ENST00000296449 MALP21145 153 aa7.21□□□□□ -1.25
CCDC36-201ENST00000296449 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.25
CCDC36-201ENST00000296449 GAGE2AQ6NT46 116 aa7.21□□□□□ -1.26
CCDC36-201ENST00000296449 TMEM243Q9BU79 118 aa7.21□□□□□ -1.26
CCDC36-201ENST00000296449 UBE2L6O14933 153 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 LINC00526Q96FQ7 95 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 CUBNO60494 3623 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 LRRK2Q5S007 2527 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 FBN2P35556 2912 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 IGHV4-31P0DP07 118 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 COX7B2Q8TF08 81 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 SND1-IT1Q9HBX3 110 aa7.2□□□□□ -1.26
CCDC36-201ENST00000296449 C9orf153Q5TBE3 101 aa7.19□□□□□ -1.26
CCDC36-201ENST00000296449 A0A087WYN8 130 aa7.19□□□□□ -1.26
CCDC36-201ENST00000296449 PRB1P04280 392 aa7.19□□□□□ -1.26
CCDC36-201ENST00000296449 HIST1H4AP62805 103 aaKnown RBP7.19□□□□□ -1.26
CCDC36-201ENST00000296449 NOP10Q9NPE3 64 aaKnown RBP7.19□□□□□ -1.26
CCDC36-201ENST00000296449 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
CCDC36-201ENST00000296449 AKAP9Q99996 3911 aa7.19□□□□□ -1.26
CCDC36-201ENST00000296449 BAHCC1Q9P281 2608 aa7.19□□□□□ -1.26
CCDC36-201ENST00000296449 H0YGX0 51 aa7.18□□□□□ -1.26
CCDC36-201ENST00000296449 C9orf129Q5T035 196 aaKnown RBP7.18□□□□□ -1.26
CCDC36-201ENST00000296449 TENM4Q6N022 2769 aa7.18□□□□□ -1.26
CCDC36-201ENST00000296449 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
CCDC36-201ENST00000296449 LOC100131303A0A0U1RQF7 123 aa7.18□□□□□ -1.26
CCDC36-201ENST00000296449 NOTCH3Q9UM47 2321 aa7.18□□□□□ -1.26
CCDC36-201ENST00000296449 DNAL4O96015 105 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 CCL18P55774 89 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 FAM208BQ5VWN6 2430 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 TEX15Q9BXT5 2789 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 SMIM9A6NGZ8 99 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 COX7CP15954 63 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 LINC00158P58513 81 aa7.17□□□□□ -1.26
CCDC36-201ENST00000296449 IGKV3OR2-268A0A0C4DH90 116 aa7.16□□□□□ -1.26
CCDC36-201ENST00000296449 WNK1Q9H4A3 2382 aa7.16□□□□□ -1.26
CCDC36-201ENST00000296449 PLAC8L1A1L4L8 177 aa7.16□□□□□ -1.26
CCDC36-201ENST00000296449 ATOX1O00244 68 aa7.16□□□□□ -1.26
CCDC36-201ENST00000296449 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
CCDC36-201ENST00000296449 CR1P17927 2039 aa7.16□□□□□ -1.26
CCDC36-201ENST00000296449 IGLV4-60A0A075B6I1 120 aa7.15□□□□□ -1.26
CCDC36-201ENST00000296449 IGHV3OR16-9A0A0B4J2B5 98 aa7.15□□□□□ -1.26
CCDC36-201ENST00000296449 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
CCDC36-201ENST00000296449 GIG44P09565 113 aaPredicted RBP7.15□□□□□ -1.26
CCDC36-201ENST00000296449 C2orf48Q96LS8 159 aa7.15□□□□□ -1.26
CCDC36-201ENST00000296449 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.26
CCDC36-201ENST00000296449 BBC3Q96PG8 261 aaPredicted RBP7.15□□□□□ -1.26
CCDC36-201ENST00000296449 TRBV6-4A0A1B0GX49 114 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 CRYGAP11844 174 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 Q6JHZ5 121 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 LRRC75A-AS1Q8N1F1 130 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 KLK5Q9Y337 293 aaPredicted RBP7.14□□□□□ -1.27
CCDC36-201ENST00000296449 NBPF19A0A087WUL8 3843 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 C11orf44Q8N8P7 122 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 UBR5O95071 2799 aaPredicted RBP7.14□□□□□ -1.27
CCDC36-201ENST00000296449 A0A1W2PRX2 142 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 LECT2O14960 151 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 PFN2P35080 140 aa7.14□□□□□ -1.27
CCDC36-201ENST00000296449 PTPN13Q12923 2485 aa7.13□□□□□ -1.27
CCDC36-201ENST00000296449 JMJD1CQ15652 2540 aa7.13□□□□□ -1.27
CCDC36-201ENST00000296449 A0A087WZ39 114 aa7.13□□□□□ -1.27
CCDC36-201ENST00000296449 C16orf74Q96GX8 76 aa7.13□□□□□ -1.27
CCDC36-201ENST00000296449 TLN2Q9Y4G6 2542 aa7.13□□□□□ -1.27
CCDC36-201ENST00000296449 TRBV6-8A0A0A6YYG3 113 aa7.13□□□□□ -1.27
CCDC36-201ENST00000296449 LINC00846Q9NV44 126 aa7.13□□□□□ -1.27
CCDC36-201ENST00000296449 SETXQ7Z333 2677 aaKnown RBP7.12□□□□□ -1.27
CCDC36-201ENST00000296449 TRGV4A0A0C4DH28 118 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 A0A1B0GX51 115 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 CCL24O00175 119 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 LY6G6DO95868 133 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 PLA2G2AP14555 144 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 RPL18AQ02543 176 aaKnown RBP7.12□□□□□ -1.27
CCDC36-201ENST00000296449 NIPBLQ6KC79 2804 aaeCLIP7.12□□□□□ -1.27
CCDC36-201ENST00000296449 HELZ2Q9BYK8 2649 aaKnown RBP7.12□□□□□ -1.27
CCDC36-201ENST00000296449 NAV2Q8IVL1 2488 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 PAX4O43316 350 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 WFDC10AQ9H1F0 79 aa7.12□□□□□ -1.27
CCDC36-201ENST00000296449 IGKV3D-7A0A0C4DH55 119 aa7.11□□□□□ -1.27
CCDC36-201ENST00000296449 NCR3O14931 201 aa7.11□□□□□ -1.27
CCDC36-201ENST00000296449 SLPIP03973 132 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms