RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 FAM19A5Q7Z5A7 132 aaPredicted RBP7.37□□□□□ -1.23
COL6A3-201ENST00000295550 ZFAND3Q9H8U3 227 aa7.37□□□□□ -1.23
COL6A3-201ENST00000295550 DHRS4-AS1Q9P1J3 65 aa7.37□□□□□ -1.23
COL6A3-201ENST00000295550 IGLV4-3A0A075B6K6 122 aa7.37□□□□□ -1.23
COL6A3-201ENST00000295550 SMIM9A6NGZ8 99 aa7.36□□□□□ -1.23
COL6A3-201ENST00000295550 C2orf91Q6ZV80 131 aa7.36□□□□□ -1.23
COL6A3-201ENST00000295550 Q6JHZ5 121 aa7.36□□□□□ -1.23
COL6A3-201ENST00000295550 RNF185Q96GF1 192 aa7.35□□□□□ -1.23
COL6A3-201ENST00000295550 CRIP1P50238 77 aa7.35□□□□□ -1.23
COL6A3-201ENST00000295550 CSDC2Q9Y534 153 aaKnown RBP7.35□□□□□ -1.23
COL6A3-201ENST00000295550 Q6ZTI0 123 aa7.35□□□□□ -1.23
COL6A3-201ENST00000295550 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
COL6A3-201ENST00000295550 Q6Q795 121 aa7.34□□□□□ -1.23
COL6A3-201ENST00000295550 A6NDX4 124 aa7.34□□□□□ -1.23
COL6A3-201ENST00000295550 PSPHP1O15172 72 aa7.34□□□□□ -1.23
COL6A3-201ENST00000295550 POM121L12Q8N7R1 296 aa7.34□□□□□ -1.23
COL6A3-201ENST00000295550 SPINK6Q6UWN8 80 aa7.34□□□□□ -1.23
COL6A3-201ENST00000295550 SOSTDC1Q6X4U4 206 aa7.34□□□□□ -1.23
COL6A3-201ENST00000295550 WFDC10AQ9H1F0 79 aa7.34□□□□□ -1.23
COL6A3-201ENST00000295550 IGKV2-28A0A075B6P5 120 aa7.34□□□□□ -1.24
COL6A3-201ENST00000295550 TRAV7A0A075B6U4 112 aa7.34□□□□□ -1.24
COL6A3-201ENST00000295550 IGKV2D-28P01615 120 aa7.34□□□□□ -1.24
COL6A3-201ENST00000295550 IGF1P05019 195 aa7.34□□□□□ -1.24
COL6A3-201ENST00000295550 C6orf99Q4VX62 202 aa7.34□□□□□ -1.24
COL6A3-201ENST00000295550 CNFNQ9BYD5 112 aa7.34□□□□□ -1.24
COL6A3-201ENST00000295550 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
COL6A3-201ENST00000295550 EPG5Q9HCE0 2579 aa7.33□□□□□ -1.24
COL6A3-201ENST00000295550 M0QY20 66 aa7.33□□□□□ -1.24
COL6A3-201ENST00000295550 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
COL6A3-201ENST00000295550 Q8N6K4 173 aa7.32□□□□□ -1.24
COL6A3-201ENST00000295550 Q8N976 141 aa7.32□□□□□ -1.24
COL6A3-201ENST00000295550 Q6ZQY7 126 aa7.32□□□□□ -1.24
COL6A3-201ENST00000295550 CELA1Q9UNI1 258 aa7.32□□□□□ -1.24
COL6A3-201ENST00000295550 C11orf45Q8TAV5 145 aa7.32□□□□□ -1.24
COL6A3-201ENST00000295550 INSL3P51460 131 aa7.31□□□□□ -1.24
COL6A3-201ENST00000295550 LMO4P61968 165 aa7.31□□□□□ -1.24
COL6A3-201ENST00000295550 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
COL6A3-201ENST00000295550 NRACQ8N912 160 aa7.31□□□□□ -1.24
COL6A3-201ENST00000295550 DEFB113Q30KQ7 82 aa7.31□□□□□ -1.24
COL6A3-201ENST00000295550 C11orf71Q6IPW1 123 aa7.3□□□□□ -1.24
COL6A3-201ENST00000295550 LINC01548A6NM66 108 aa7.3□□□□□ -1.24
COL6A3-201ENST00000295550 COX17Q14061 63 aa7.3□□□□□ -1.24
COL6A3-201ENST00000295550 SMIM11BQ8TCY0 68 aa7.3□□□□□ -1.24
COL6A3-201ENST00000295550 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
COL6A3-201ENST00000295550 TRBV7-6A0A0J9YX20 115 aa7.3□□□□□ -1.24
COL6A3-201ENST00000295550 PRYO14603 147 aa7.3□□□□□ -1.24
COL6A3-201ENST00000295550 UBE2D3P61077 147 aa7.29□□□□□ -1.24
COL6A3-201ENST00000295550 UBE2D4Q9Y2X8 147 aa7.29□□□□□ -1.24
COL6A3-201ENST00000295550 TNFRSF13BO14836 293 aaPredicted RBP7.29□□□□□ -1.24
COL6A3-201ENST00000295550 CR1P17927 2039 aa7.29□□□□□ -1.24
COL6A3-201ENST00000295550 UBE2D2P62837 147 aa7.29□□□□□ -1.24
COL6A3-201ENST00000295550 ZNF73O43830 326 aaPredicted RBP7.29□□□□□ -1.24
COL6A3-201ENST00000295550 TRBV6-8A0A0A6YYG3 113 aa7.29□□□□□ -1.24
COL6A3-201ENST00000295550 TSHBP01222 138 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 Q6ZVQ6 151 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 A8MZ25 164 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 PLA2G2AP14555 144 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 NANOS2P60321 138 aaKnown RBP7.28□□□□□ -1.24
COL6A3-201ENST00000295550 PPDPFQ9H3Y8 114 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 J3QKU1 62 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 C7orf33Q8WU49 177 aa7.28□□□□□ -1.24
COL6A3-201ENST00000295550 AKAP13Q12802 2813 aa7.27□□□□□ -1.24
COL6A3-201ENST00000295550 M0R378 163 aa7.27□□□□□ -1.24
COL6A3-201ENST00000295550 ESRGQ1W209 222 aa7.27□□□□□ -1.24
COL6A3-201ENST00000295550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.27□□□□□ -1.25
COL6A3-201ENST00000295550 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
COL6A3-201ENST00000295550 DNAJC9-AS1A6NH13 148 aa7.27□□□□□ -1.25
COL6A3-201ENST00000295550 CD164L2Q6UWJ8 174 aa7.27□□□□□ -1.25
COL6A3-201ENST00000295550 IGLV9-49A0A0B4J1Y8 123 aa7.26□□□□□ -1.25
COL6A3-201ENST00000295550 UBE2D1P51668 147 aa7.26□□□□□ -1.25
COL6A3-201ENST00000295550 GOLGB1Q14789 3259 aaKnown RBP7.26□□□□□ -1.25
COL6A3-201ENST00000295550 PYGO1Q9Y3Y4 419 aa7.26□□□□□ -1.25
COL6A3-201ENST00000295550 K7EQG2 157 aa7.26□□□□□ -1.25
COL6A3-201ENST00000295550 RPL37AP8A6NKH3 93 aa7.25□□□□□ -1.25
COL6A3-201ENST00000295550 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
COL6A3-201ENST00000295550 Q6ZS46 218 aa7.25□□□□□ -1.25
COL6A3-201ENST00000295550 CRYGAP11844 174 aa7.25□□□□□ -1.25
COL6A3-201ENST00000295550 HECTD1Q9ULT8 2610 aa7.25□□□□□ -1.25
COL6A3-201ENST00000295550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.25□□□□□ -1.25
COL6A3-201ENST00000295550 URB1-AS1Q96HZ7 61 aa7.25□□□□□ -1.25
COL6A3-201ENST00000295550 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.24□□□□□ -1.25
COL6A3-201ENST00000295550 KLLNB2CW77 178 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 COX8CQ7Z4L0 72 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 DEFB131BA0A096LNP1 70 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 PRR9Q5T870 116 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 IL17DQ8TAD2 202 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 NTM-AS1Q6ZSK4 140 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 NRGNQ92686 78 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 LOC100131303A0A0U1RQF7 123 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 C11orf21Q9P2W6 132 aa7.24□□□□□ -1.25
COL6A3-201ENST00000295550 ATRQ13535 2644 aa7.23□□□□□ -1.25
COL6A3-201ENST00000295550 Q8N814 137 aa7.23□□□□□ -1.25
COL6A3-201ENST00000295550 PROK1P58294 105 aa7.23□□□□□ -1.25
COL6A3-201ENST00000295550 HILS1P60008 231 aa7.23□□□□□ -1.25
COL6A3-201ENST00000295550 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
COL6A3-201ENST00000295550 RNASE3P12724 160 aaKnown RBP7.22□□□□□ -1.25
COL6A3-201ENST00000295550 CENPFP49454 3210 aa7.22□□□□□ -1.25
COL6A3-201ENST00000295550 SRCAPQ6ZRS2 3230 aa7.22□□□□□ -1.25
COL6A3-201ENST00000295550 BEAN1Q3B7T3 259 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms